Aals021771.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agonopterix alstromeriana
Gene Symbol
ZEB2
Assembly
GCA_963924505.1
Location
OZ004689.1:521551-529598[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.21 13 6.9 4.3 2 21 163 182 162 183 0.89
2 25 0.013 0.84 10.7 0.6 1 23 216 239 216 239 0.94
3 25 0.0039 0.25 12.3 0.7 1 23 244 266 244 266 0.96
4 25 0.27 17 6.5 4.9 2 21 270 289 269 290 0.93
5 25 0.002 0.13 13.3 1.7 2 23 334 356 333 356 0.95
6 25 0.00086 0.055 14.4 0.3 3 23 364 383 363 383 0.96
7 25 0.0021 0.14 13.2 0.2 1 23 389 411 389 411 0.98
8 25 0.0024 0.15 13.0 1.4 1 23 417 440 417 440 0.97
9 25 0.0027 0.17 12.8 0.8 1 23 450 473 450 473 0.96
10 25 0.027 1.8 9.7 5.6 1 23 484 506 484 506 0.98
11 25 0.00051 0.033 15.1 0.1 2 21 644 663 643 664 0.95
12 25 0.0082 0.53 11.3 0.1 1 23 694 717 694 717 0.91
13 25 0.0023 0.15 13.1 0.8 2 23 723 744 723 744 0.97
14 25 0.65 42 5.3 4.0 5 20 751 766 749 767 0.92
15 25 0.0016 0.1 13.5 1.4 1 23 777 800 777 800 0.92
16 25 0.0018 0.12 13.4 1.9 1 23 806 828 806 828 0.92
17 25 0.00063 0.041 14.8 1.3 1 23 835 857 835 857 0.97
18 25 0.0012 0.075 14.0 0.1 2 21 946 965 945 966 0.95
19 25 0.001 0.065 14.2 1.1 1 23 996 1019 996 1019 0.94
20 25 0.022 1.4 10.0 1.1 2 23 1026 1047 1026 1047 0.96
21 25 0.14 8.9 7.5 5.1 3 20 1052 1069 1050 1070 0.90
22 25 0.0058 0.37 11.8 1.3 1 23 1081 1104 1081 1104 0.92
23 25 0.0007 0.045 14.7 1.6 1 19 1110 1128 1110 1132 0.90
24 25 8.9e-05 0.0057 17.5 1.7 1 23 1139 1161 1139 1161 0.98
25 25 0.062 4 8.6 1.7 1 23 1180 1203 1180 1203 0.96

Sequence Information

Coding Sequence
atgagTCGACAAGTGGATATAAAAGCTCTTGTATCGCATATTGTTCGTGGAGATGGCGCCGACAAATGCCGGATTTGCTTGGGTGACACATCGGAAGGCCAAGTTTATCTCGGAGATACCGTCATGATGGATGGGGACAAGTCCATCACGCTCTCAGAACTCTTGGAAACCATCACAGGAGTCGAGGTGCAGGTGGAGGGAGACCTGCCCTCGGGGCTGTGCCCTTCATGCTCGGTAGCAGCCTTATCCGCTGGCGCCTTCCGAACCCTCTGCCAGCGCTCCGCAGCCCACTGGAACACCACACTGGAGCTCCTCCAATGCCTCCCTGACCCGGATAACGTTAAAGACAACAAATACATTTACGCTATTTTAGAAAACGATCAAATAACGTTTGTAGATGACACACTTGATATTTGCGAGGAAATTAAAACTGAGATCGTACAAGAAGAAAAGCCGAAGAGAATGAAATTAGTGAAAAATCATTGCCAATGTCAGGATTGCGGAAAAAAATTCACTTGCGCTCAATACTTGCATGATCACCTAATGGAATCCACGGATTTGAAACGTGCATGCTTCGTATGCGCATCAATTATAAACCGAGATCAGCTTATCAACCATTTGAAACAAGCACACAATCGAGACATTTACGACTGTAAAAAGTGTCCTGCTATATTCCAAACGTTAAAACTCTATAAACGTCATCTGGTCAAAGCTCATGCTTCTAGAGCTCATTCCTGTGGTGAATGCGGACGTAGCTTCCAGTCCACAGCAGCTTTTAACGGACATCTCTCCTCGCACGCTGCTAAAACCTGCCCGGGCTGCGATAAACTATTCCGCAACCACAGATGCTATTTACACCACGTAAAAAGATGCTGTAATTTAGATAGAAGTAGAAAAGAAGCTCATTTTACTAAAAGCAAGGTCCTATTTGAAGTAAAGAATAATAAAACGGAGAAAAAGATTAAGGTTGGCATACGAGGGAGTGCGGACAAGGAATGCATTTGTGATTACTGCGGCAAAACCTTCGCTGGGAAGAGGTTTGTCTGCGCTCATATACAAATAGTGCACATGAAAAACACACATAGACCATGTCCTTACTGCGGTAAATCATTCGCAGCTGCCCACATGACAGAGCACATAAAGAAACACAAAGAAATCCAACTGTTCACGTGTGAACTCTGCGGTATAGCCCTAAAAACTAAACTTGGATACATCCAGCATATGCGTTTACATACTGGAGAAAAGCCGTACACCTGTAAATATTGTCCGGAGACTTTCTCCGCGTCGTCCAGACGTTCTGAACACATCCGTAAGACTCACATGGCTTCTGAAGCAATTGTGTTGAAATATAAGTGTGATTTCTGCCCGGCACGGTTTAGGCTTCCTTACAGATTGAAGAAGCATGTATCTTCGGTGCACGGTGATAAAAATGATGATAATAAGTTAGAGTTTGAGTGTCCGGAATGTCATATAAAGTTTGGGAGCTGCCGTGGCTTACTGCACCACAGTAGGAAGCATCAGACTTTTAACTTAAAATCTTTGAAAAATTCTGATTTAAATGTTTTGCATGAGTCCGTAGAAGTGGAGGACGCGCCGTCGCTGCCACGTAAAATATGCGACGCCTGTATGACCAGCGTCCTGACAGTATTGTCCTTCGAAGAACTCTGCAAACAATCCGCAAGAAAATGGCACGAAATTACcaattttattaacaatttcCATATCCCTAACAACACTAAAAATCTGTATTTTGCTTTCAACGGCGATGAATTCAATGCTGTTACTGATTCTACATCTTGCCCGGGTGCTAGAGCTTCAAATTCAGAGCAGGCGTTACGCAATTTCAAGAAAAGATTAAATCGAAATAGGTTGTACATAAAGCGCCTTCACAATAAAAGATTCAAACTGTCACAATTAAAGTCTGATCTCAAATGCCCTGAGTGTAAAACTGTTTTTGAAAGCGTCCGaaccttaaataaacacatCAGAGATAGTGGTGTGAAAGCCTGTGTCTACTGCAAGCAAATAATCAACATGCCTGGAATGAAAGAACACCTTCTAATCCACAACATTGAGGCATACGCGTGCATAGTTTGCACAGAAACATTTGAAAACGAGACACTTTTGGAAAAACACATGTTAGTTAACCACGGCAAAGGTTCCGCCGTTTGCTTAGAATGTAAACGCACATTCCCTAAACATAATGGTCTATCAGCTCACATCAAAGTTCACAAGCCTCAATGGTGCATCGGATGCGATACGAAATTCAGCAACAAAACCTGCTTCAGAAAACACATTTGTCCAAACCCTACTGCCGATTCTTCGACGTACATTTGCGACTACTGCTCCAAGGAATATCAATTCAAACGACAGTTGAAAAGACACATTGTCCTAAACCATCTGAGAGGCGCGGAACACCAGTGCCATGAATGCGGAAAAAATTTCATGAGTCGAGCAGCTCTATTGGAACACGATAACACACACAATAAGGTCGAAGATAGATTTATTTGTGACATTTGCGGCATGAAATACAGTACGAGGAGAGGTTACGAGAAACATCGTACAAAGCACTTTAATGCTTCCCCTCAGAAGGGACAAACTAAGTCCAACACTTTTATTAACAATTTCCATGTCCCTGACAACACTAAGAACCTGTATTTTGCACTCGATGGAGACGAAGTCAAAGCTGTTGATTCGACATCTTGTATGCGTGCTAGAGCTTCAAATTCAAAGCAGGTGTTACGTAATTTCAAGACAAGATTAAATCCAAAAAGGGTGTACATAAAGCGCCTTCACAATAAAAGACTCAAACAGCCACAATTGAACTTTGATCTCAAATGCCCTGAATGTAAAGCTGTTTTTAAAAACGTCCGAACCTTAAATGAACACATCAGAGATAAAGGTGTGAAAGCCTGTGTCCACTGCAAGCAAATAATCAACTTGCCTGGAATGAAAGAACACCTTCTAACCCACAACATTGAGGCATACGCTTGCAAAATTTGCGCACAAACATTTAGAAAggagacatttttgaaaaaacacATGTTAGCTTACCACGGCAAAGGTTCCGCCGCCGTTTGCGTAGAATGCAAACGGACATTTCCTAAAGAAAATTGTCTATTATCTCACATCACAGTTCACAAGCCTCAGCGCTGCATCGGATGCGATAAAAAATTCAGCAACAAAACCTGCTTCAGAAAACACATTTGCCCTAACCCTATAGCCGCCGGTAAATTCACTTACATTTGCGACTACTGCTCCAAGGAATATCGATTTAAGCACGTGTTAAGAGCCCACATTGTCCTAAACCATCTAAGAGGCAGGCCACATCAGTGCCATGTATGCGGAAAAAAGTTCATAAGTCGGGCAACTCTGTTGGAACACGACAACATACACAATAGGGTCGAAGATAGATTTATCTGTGACATTTGCGGCATGAAATACAGTACGAGGAAAGGTTACCAGAACCATCGTAGAAAGCACTTTGGTGATCCTGAACGCAAGACTCCCACGGCACCTAAAGAAAAAGTGTTTAAACATACGTGTGATTTCTGCCCAGCGCGGTTTCTGCGTCCTTACAGATTGAAGAGGCATCTTTCTTCGGTGCATAGTGAACTTACAGTTTGA
Protein Sequence
MSRQVDIKALVSHIVRGDGADKCRICLGDTSEGQVYLGDTVMMDGDKSITLSELLETITGVEVQVEGDLPSGLCPSCSVAALSAGAFRTLCQRSAAHWNTTLELLQCLPDPDNVKDNKYIYAILENDQITFVDDTLDICEEIKTEIVQEEKPKRMKLVKNHCQCQDCGKKFTCAQYLHDHLMESTDLKRACFVCASIINRDQLINHLKQAHNRDIYDCKKCPAIFQTLKLYKRHLVKAHASRAHSCGECGRSFQSTAAFNGHLSSHAAKTCPGCDKLFRNHRCYLHHVKRCCNLDRSRKEAHFTKSKVLFEVKNNKTEKKIKVGIRGSADKECICDYCGKTFAGKRFVCAHIQIVHMKNTHRPCPYCGKSFAAAHMTEHIKKHKEIQLFTCELCGIALKTKLGYIQHMRLHTGEKPYTCKYCPETFSASSRRSEHIRKTHMASEAIVLKYKCDFCPARFRLPYRLKKHVSSVHGDKNDDNKLEFECPECHIKFGSCRGLLHHSRKHQTFNLKSLKNSDLNVLHESVEVEDAPSLPRKICDACMTSVLTVLSFEELCKQSARKWHEITNFINNFHIPNNTKNLYFAFNGDEFNAVTDSTSCPGARASNSEQALRNFKKRLNRNRLYIKRLHNKRFKLSQLKSDLKCPECKTVFESVRTLNKHIRDSGVKACVYCKQIINMPGMKEHLLIHNIEAYACIVCTETFENETLLEKHMLVNHGKGSAVCLECKRTFPKHNGLSAHIKVHKPQWCIGCDTKFSNKTCFRKHICPNPTADSSTYICDYCSKEYQFKRQLKRHIVLNHLRGAEHQCHECGKNFMSRAALLEHDNTHNKVEDRFICDICGMKYSTRRGYEKHRTKHFNASPQKGQTKSNTFINNFHVPDNTKNLYFALDGDEVKAVDSTSCMRARASNSKQVLRNFKTRLNPKRVYIKRLHNKRLKQPQLNFDLKCPECKAVFKNVRTLNEHIRDKGVKACVHCKQIINLPGMKEHLLTHNIEAYACKICAQTFRKETFLKKHMLAYHGKGSAAVCVECKRTFPKENCLLSHITVHKPQRCIGCDKKFSNKTCFRKHICPNPIAAGKFTYICDYCSKEYRFKHVLRAHIVLNHLRGRPHQCHVCGKKFISRATLLEHDNIHNRVEDRFICDICGMKYSTRKGYQNHRRKHFGDPERKTPTAPKEKVFKHTCDFCPARFLRPYRLKRHLSSVHSELTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-