Aals022612.1
Basic Information
- Insect
- Agonopterix alstromeriana
- Gene Symbol
- ZFY
- Assembly
- GCA_963924505.1
- Location
- OZ004690.1:6449519-6455788[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.1e-06 6.8e-05 23.6 0.4 1 23 177 199 177 199 0.98 2 14 0.00029 0.019 15.9 0.6 1 23 205 228 205 228 0.95 3 14 0.00012 0.0074 17.1 0.6 1 23 234 256 234 256 0.98 4 14 1.9e-06 0.00012 22.7 2.7 1 23 259 281 259 281 0.99 5 14 2.1e-05 0.0013 19.5 4.4 1 23 287 309 287 309 0.98 6 14 1e-06 6.7e-05 23.6 2.2 1 23 315 338 315 338 0.96 7 14 0.00066 0.043 14.8 1.5 1 23 344 366 344 366 0.91 8 14 1.6e-05 0.001 19.8 1.2 1 23 372 394 372 394 0.98 9 14 0.00057 0.037 15.0 2.0 1 23 400 422 400 422 0.99 10 14 2.8e-07 1.8e-05 25.4 1.1 1 23 428 450 428 450 0.98 11 14 9.6e-07 6.2e-05 23.7 0.8 1 23 456 478 456 478 0.98 12 14 0.076 4.9 8.3 3.0 1 23 484 503 484 503 0.95 13 14 1.8e-06 0.00011 22.9 0.8 1 23 509 531 509 531 0.98 14 14 0.044 2.8 9.0 6.6 1 23 537 559 537 559 0.98
Sequence Information
- Coding Sequence
- ATGTCGGAATCTTGGAACATAAGTGGCCTGTGCCGCTGTTGTCATTCTGAAGGCAGTTTCCGGAGTTTGGGAGTCGCATACCCTTGCGAAGGAAAAGACGAAATCTTCGCAGTTTTGTTGCGAGAGACTTTCGATATTATTATAAGCCCGATGGCAGGTACTTCCAGTGCAGCGACGTACACAATATGTGAGAGTTGCGTACCCAGGCTCCGGGACGCCGCACTGTTCAAGCAGCAGGTGGTCAAGTGTGAGAGGGCTTTTGGAGATTACTATAACAACTACTTTTATAAAGGTGCAGAAACATTTGAAAATGCAGTTAAACTTGAAACTGATGAATTGAAAGAGGAATCAACACATTCTATCGATGATAATCGAGATAGCCTGGAACATGAAGATGATAAACTGACGTCGGTGGATATATTCATAGAGCCCGACATCGAAGACCAGCCTCTCTCGTTCCTTGCCAAGAGTAAACATGTCGAAAATAGTAATGAAGAAACGACACAGCACAAGaaaaaaacgaaaaagtttTCCTGCGAACTTTGTCCGAAAAAATTCACATACAACGGCTCCCTAGAAGTTCATATGAAAATCCACAGCGGCGACAAAACATACcaatgtttaatatgtaacactaATTATATAAAAAACAAGGATCTCACTAAGCACATAGAAGAATCACATAGTGTGGATGATAAATACCCGTGCAAATTGTGTTCAGAAATATTCGAAAAACCGCGTCAACTAAAAACTCATCTAACCACCCACGATCAATACAAATGCGATTATTGCGATAAGAAATTCCAGagaaaaaaaggtttaaaaGAACATCTAAAAGTTCataccggagaaaaaaaattcacatGCACGATTTGCAGTAAATCGTTCGGCCATAATCAAACTCTCAAATCTCATATGTACACGCATACTGGAGAAAAGCCGTATGTTTGCGATGTATGTGGCAGAAGATTCCCACAACGGACTCATCTGAAACGACATATACACATAATCCACACAGGCGTAAAACCATATTCGTGTAATATATGTTTAAAGCAATTTTCCAGTAAAAGTTACCTGTCTATTCACGACCGACAACATACAGGCGAAAAACCGTTTTCATGCGAAGTTTGCAAGAAAAACTTCACAGCATACACTACTTTAAAAGTCCACATGCGAGTCCATACTGGTTTAAAACCGTATTCGTGCACATTCTGCAATAGACAATTCGCTCAAATGGCCAGCTTTAAACTCCACGAAAGAACGCATACCGGAGAAAAGCCCTATTCCTGTACAGTGTGCAAAAAACAGTTTTCAGACAATGGTTACTTAAAAATACATATGCGGGTCCACAGCGGCGAAAAGCCCTATAACTGCGACATTTGCAAACGGGCTTTTAGAGAAACTGGACAGCTGAAACGTCATATGCGCGTTCATACTGGAATAAAGCCGTATACAtgtaaaatatgtaataaaCAGATAGGCAATTTGTCTAAGCACATGCGTGTGCATTCTGATGATAGGCCTTTCAATTGTAATGTTTGTAATAAGCAGTTTTCTATTAGTGGTAACTTGAAGTTACATATGAGGATCCACACGGGGGAAAAGCCGTTTTCATGTGATATTTGTTGTAGTCAGTTCACGCAGAGCAGCGGGTTGAAGAGGCATCGATGTACGCATGGCGGGAAGAGTGATGGTTGA
- Protein Sequence
- MSESWNISGLCRCCHSEGSFRSLGVAYPCEGKDEIFAVLLRETFDIIISPMAGTSSAATYTICESCVPRLRDAALFKQQVVKCERAFGDYYNNYFYKGAETFENAVKLETDELKEESTHSIDDNRDSLEHEDDKLTSVDIFIEPDIEDQPLSFLAKSKHVENSNEETTQHKKKTKKFSCELCPKKFTYNGSLEVHMKIHSGDKTYQCLICNTNYIKNKDLTKHIEESHSVDDKYPCKLCSEIFEKPRQLKTHLTTHDQYKCDYCDKKFQRKKGLKEHLKVHTGEKKFTCTICSKSFGHNQTLKSHMYTHTGEKPYVCDVCGRRFPQRTHLKRHIHIIHTGVKPYSCNICLKQFSSKSYLSIHDRQHTGEKPFSCEVCKKNFTAYTTLKVHMRVHTGLKPYSCTFCNRQFAQMASFKLHERTHTGEKPYSCTVCKKQFSDNGYLKIHMRVHSGEKPYNCDICKRAFRETGQLKRHMRVHTGIKPYTCKICNKQIGNLSKHMRVHSDDRPFNCNVCNKQFSISGNLKLHMRIHTGEKPFSCDICCSQFTQSSGLKRHRCTHGGKSDG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -