Aals017063.1
Basic Information
- Insect
- Agonopterix alstromeriana
- Gene Symbol
- -
- Assembly
- GCA_963924505.1
- Location
- OZ004680.1:7209283-7211736[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-10 4.6e-07 29.9 0.1 2 44 17 59 16 60 0.94
Sequence Information
- Coding Sequence
- ATGGTACGAAATTATATAAGAAAAACCGATCGAGCGGCTTCCTATAGTAGAGAACAATTATTAGAAGCAGTGGAAAAAGTTAAGAACGGCGAGTTGTCAGCTTATAGAGCTTCTTTGGCATACAAAATTCCCCGACCAACCATAGTAGCCCGAGTCTACGGTAGATATGGATTAAAATCTGACTCTTTAGGGAGAAGTACGTTTCTTAGTGCAGAGACAGAGAAAAAATTAGCCAAAAACATACATATTATGGAAAAATATGGATTAGGTCTCACCAGAGAAGAAACACTTGAGCTTGTTGGACAATATATTGCCAAAAATAATATccctaataattttaaaaacggcATGCCAGGGGAAGACTggtttttatcatttaaaaagCGGCATGCTTTGTCGGTTAAGAAACCTCAAGCCGTGGAGAATTCGCGTAAAAAAGCATGTAACCCATGGGTTATTTACTCCTActttgatttattgaaaaataccTTGGACAAGCTGGAGTTACACGATAAGCCTGAACAAATTTGGAACTTGGATGAAACTAGTTTCAGCAAGGATCCCAGCAAAACCAAAGTCGTAGGCCTTCGTGGTTATGCTTCGACAAGAACAATCGCCTCACCCGGAAAAGATAACACAACAGTTTTGTTGGGATGCAGTGCAGCTGGTGGTAAAACTCCTCCGCTTATAGTTTATAAGGGTAAAAATCTCTGGGACGAATGGATTTCGGCAGAGGGTTTTCCTGGAACTGTATATGCAGCTACTACAAACGGATGGATGGAGACTGAGGTGTTCGAAACATTCTTTCAAAAGGTGTTTCTACCCACCGTAGGTGATAGACGGCCAGTATTATTGATTTACGATGGCCACTCTACGCATGTGGGGATCAATATTATTGAAAAAGCACGAGAAGCCGATATTACCATTCTAAAAATTCCACCACACACGAGCGATAACTTGCAGCCGTTGGATTTGGCCGTCAACAAGTCTTTTAAAGACAAATGGGACCAGAGTTTAGTAAAGTGGCAAAGGCTTAATGTTGGTCAAGCGTTGCCTAAAAAAGAATTCTCCAAGTTGATTGGTCAAGTCTGGTCCCAAATTGATCCCCAAGTTTGTGTAGCTGGGTTCCGTAAAGCCGGAATTTTTCCCTTTAATAGCAACGCAGTCCCTCAAGAAAAATTTAACCCGGACCAACTTGTGGAGTGGAAAAAGCAACAGAAACAGCTCACCAAATGCAATGAGATGACCACGTCATCTACAACTATTTCAAAAGATCTCGGGGTTCAACTTCAAACTGCAGTTCAGCAAATTCCTGGTACTTCATCATCTAAAGACCAGTTTTCCAGAGCAGACGCAGTCCCTCAAGAAAAATTTAACCCGGACCAACTTGTGGAGTGGAAAAAGCAACAGAAACAGCTCACCAAATGCAATGAGATGACCACGTCATCTACAACTATTTCAAAAGATCTCGGGGTTCAACTTCAAACTGCAGTTCAGCAAATTCCTGGTACTTCATCATCTAAAGACCAGTTTTTTATTCCAAAACTTGAAAACGTGGTTCCTTTGGTCCCTTCATTGCTGTCTATTTGCTTGAGTCGCTGGAATTTTCATACTAAAGCAAATATCGTATCGGAGCATGTTCAAAAGTCCCCAAAAGTTACAATTCTCGGAGATCGTCTTATAAAGCTCAACGTTACTTTTGAGGATCTGTTGCTCGCAAAAATAAACGCGGGAACACATAATGTTAAAAGACGCAAAAAAGTAGCTAGCGGGgccgaaataataacatccGATGTTGTGTATATAAAACAAAGAGAActtgaagaagaaaaaaacagaaaacttaaacaaaaggaagagaaacaattaaaaaaaaataccaaagaaaaaaaagcaaaactagaaaagaaGACCAATAACAGTCGCGGAGTGAGAAGAAAAATTCTGAAAAGTGAATCttatcaaaaaaagaaaaaaatgaagaCTAATGATTCCACTAGTGACAGTGATATGGATATAGAATTGATGGATGAGAGTGATGTAGAAAATGGAGATTACTTCACAGAATTGCTACATACAAATAATGATGATACTGATGTTGTTGGAGAATGTGAAgacgaagaagaagaaaataattatgatgaacCACCAACAAGTAACGTCCACAAAGGCCAATGGGTCTTAGTAAAATTTACAACTAAAATGAGTGTTAAACACTACATTGGAGTAGTTACAGAGTTGAACTGTGACGGTATCCCAATTGTAAAGTTTGTCAGGAAAAGTATATTTAGAGGCGGTGAGAATAAAAGTACATATTTTGTTTTCCCAAACGTACCTGACATTTGCGAAGTCAGACATCTCGACGACATAGAATGCAAGCTACCGGACCCAACAATAGGTCGAAgaggacaaatattttttaaaatgtcttttCAAGGCTATAATATTCAATAG
- Protein Sequence
- MVRNYIRKTDRAASYSREQLLEAVEKVKNGELSAYRASLAYKIPRPTIVARVYGRYGLKSDSLGRSTFLSAETEKKLAKNIHIMEKYGLGLTREETLELVGQYIAKNNIPNNFKNGMPGEDWFLSFKKRHALSVKKPQAVENSRKKACNPWVIYSYFDLLKNTLDKLELHDKPEQIWNLDETSFSKDPSKTKVVGLRGYASTRTIASPGKDNTTVLLGCSAAGGKTPPLIVYKGKNLWDEWISAEGFPGTVYAATTNGWMETEVFETFFQKVFLPTVGDRRPVLLIYDGHSTHVGINIIEKAREADITILKIPPHTSDNLQPLDLAVNKSFKDKWDQSLVKWQRLNVGQALPKKEFSKLIGQVWSQIDPQVCVAGFRKAGIFPFNSNAVPQEKFNPDQLVEWKKQQKQLTKCNEMTTSSTTISKDLGVQLQTAVQQIPGTSSSKDQFSRADAVPQEKFNPDQLVEWKKQQKQLTKCNEMTTSSTTISKDLGVQLQTAVQQIPGTSSSKDQFFIPKLENVVPLVPSLLSICLSRWNFHTKANIVSEHVQKSPKVTILGDRLIKLNVTFEDLLLAKINAGTHNVKRRKKVASGAEIITSDVVYIKQRELEEEKNRKLKQKEEKQLKKNTKEKKAKLEKKTNNSRGVRRKILKSESYQKKKKMKTNDSTSDSDMDIELMDESDVENGDYFTELLHTNNDDTDVVGECEDEEEENNYDEPPTSNVHKGQWVLVKFTTKMSVKHYIGVVTELNCDGIPIVKFVRKSIFRGGENKSTYFVFPNVPDICEVRHLDDIECKLPDPTIGRRGQIFFKMSFQGYNIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00026789; iTF_00751998; iTF_00751997; iTF_00751999;
- 90% Identity
- -
- 80% Identity
- -