Basic Information

Gene Symbol
Xbp1
Assembly
GCA_963924505.1
Location
OZ004669.1:15765832-15768319[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.3 2e+03 -0.7 0.0 14 25 27 38 27 40 0.85
2 3 3.6e-18 3.3e-15 56.3 7.2 2 60 43 101 43 106 0.92
3 3 0.00015 0.14 12.7 0.3 30 55 85 110 85 113 0.92

Sequence Information

Coding Sequence
ATGAGTGCTCCGATTATCATCACGGTGCCGAACCACTACATGGCGATGGAGGACGTGGAGTCGAAGGTGGTGGTGGACGTCGCCGCGCCGCCCTCCAGGAAGCGGCGGCTCGACCACCTCTCCTGGGAGGAAAAGATGCAAAGAAAAAAACTGAAAAACCGCGTCGCAGCACAAACGTCGCGCGACCGAAAGAAGGCTAAAATGGATGAAATGGAAGGACATATAAACTTCTTATTGGAAGCAAACGATCGTCTGACGAGCGAGGTGGAGAGCTTGAAGGCATTGAACGAGAGATTGTTAGGCGAGAACGCGACGCTTCGCAGCGAGGCGGCGGCGCGGGACGTCGCGGGGGCCCCAAGACCAGCAGAGTCTACTCCTCAGCAGAAGGAGGGGCCCCCAGCGGCGCTCCGCGCGGCGCGCCTGCTGCTTGCGATGTGTCTCCTCTCGCAGACATCCTCGCACACCTCGACTCTGAAGAGTATCTCGATACCCTCCATCAACTTGCAGACTCCCTCCTCCAAGAGATTGATGCAGGTTCTTCAGCAGAGATTGAagatGTCACAGTCCGGGACACTAGAGAGTGCCCTAAAGGAGCTCAAGTGGTGGGGACCGCAGCAGAGTACCTGGAACCCAGTGAAGGTGGAGTCGTAG
Protein Sequence
MSAPIIITVPNHYMAMEDVESKVVVDVAAPPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEGHINFLLEANDRLTSEVESLKALNERLLGENATLRSEAAARDVAGAPRPAESTPQQKEGPPAALRAARLLLAMCLLSQTSSHTSTLKSISIPSINLQTPSSKRLMQVLQQRLKMSQSGTLESALKELKWWGPQQSTWNPVKVES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_00027500;
80% Identity
-