Aaln019356.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agelastica alni
Gene Symbol
nfxl1
Assembly
GCA_950111635.2
Location
OX467710.1:65972298-65990653[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 3 5.9e+04 -7.7 5.6 15 19 95 99 94 99 0.81
2 19 0.17 3.3e+03 -0.1 0.4 4 10 130 136 129 136 0.95
3 19 5.5e-08 0.0011 20.6 15.1 1 19 144 161 144 161 0.99
4 19 3 5.9e+04 -5.3 2.0 10 13 168 171 167 172 0.73
5 19 5.3e-06 0.1 14.3 18.8 1 19 197 215 191 215 0.88
6 19 3e-08 0.00059 21.5 14.4 1 19 250 268 250 268 0.99
7 19 0.00011 2.2 10.0 12.3 1 18 303 320 303 321 0.97
8 19 0.13 2.6e+03 0.2 0.9 1 5 330 334 330 339 0.90
9 19 1.1e-05 0.21 13.3 15.9 1 18 355 372 355 373 0.94
10 19 1.2e-10 2.4e-06 29.1 13.1 1 18 382 399 382 400 0.97
11 19 0.95 1.9e+04 -2.5 1.1 5 10 428 433 428 433 0.94
12 19 0.00069 14 7.5 7.4 10 19 449 458 446 458 0.90
13 19 0.12 2.3e+03 0.4 5.0 3 12 469 478 468 478 0.91
14 19 3 5.9e+04 -4.7 2.8 14 18 506 510 506 511 0.87
15 19 3 5.9e+04 -4.7 1.4 6 10 537 541 536 541 0.57
16 19 0.0023 46 5.8 7.5 1 11 547 557 547 558 0.98
17 19 1.3e-06 0.026 16.2 16.5 3 19 588 604 587 604 0.94
18 19 3e-05 0.58 11.9 13.2 1 18 647 666 647 667 0.88
19 19 1.5 3e+04 -3.2 0.8 6 10 697 701 696 701 0.87

Sequence Information

Coding Sequence
ATGTGGAGGATTAAAATACATGAATCCAAATCTACACATGTAAATTTTACCAATAGAGCTCAACAACTTATACCTGTAACCATAAATGAAAAACGAATTCCATTCACAAATACAGCAAAATACTTGGGTATCACCCTCGATGCTAAGATATGGACATGTGTCAATTGCTACGGATATTTTCACCTAATGTGTGTTCAGAGATGGTCCAAAGACACTGTAACTCAACTAAAAAATGCTCTTCATGAACAAACGGTGGTTCATCAACATAAAGTGTGCTGGTGCTGCCCTAAATGCCGCCATGAGTATGAATCTATAGATATtcctacaaaatatttatgtttttgtacaAAAACACAGAATCCAAAGTATGATCCATATATTGCACCTCATTCCTGTGGCCAGATTTGCAAAAAACCTTTGAAACCAGAATGTGGTCATTACTGCCTACTTCTGTGTCATCCAGGTCCATGTCCCCCTTGTCCTGTAACCGTAAATGTTTCTTGCCATTGTGGATCGCAACCTCCAAGAACTCAAAGATGCAGTAAAAAAGAATGGTCTTGTAATAATGTTTGTGGAAAACAACTAAAATGTGACAAGCATTCTTGTCCTAACCCATGCCACCCAGGCAAATGTCAACCTTGTCCaaagaaaaatatacaaaagtGTATTTGCAAAACTCAACAGAAACTTCGTGAATGTGCTAGTCCAACTTGGCAATGTGATAAGATATGTAACAAACCACTTGAATGTGGTCATCATAGATGTCAAGAAACTTGTCATGATGGTATTTGTGATATGTGTCCACTAAATAAGCTTAGGACATGTCCTTGTGGAAAAACTTCATTCCAGCTTCCTTGTACTCAAGAAACACCAACTTGTCTTGACACATGTGAAAAACTTTTAGATTGTGGGATACACCATTGTAATTTGAAATGTCATAGGGAGAAATGTGGAGTATGCTTGGAAACAGTAGAAAAAGCTTGCAGATGTGGCCAACATACCAAAGAAGTTCAGTGCTACAAACCATATTTATGTGAAGTAAAATGTAAGCAAATGAAAGATTGCAATAAACATTCATGCAATAGAAAGTGCTGCGATGGTAACTGTCCACCCTGTGAAAAACCATGTGGGAGAACTTTAAATTGTGGTAATCACAAATGCAATTCAGTGTGCCATAGAGGACCTTGCTATCCTTGCAACGAGACTAACGATGTATCTTGCAAATGTGGCACGACAAAATTAACTGTACCTTGTGGGCGTAAATCTAGAACAAAACCTCCAAAATGTAGCAAACTGTGTTCGGCTCCTGTTGATTGTCATCATGAAAAAAGGGATCCACATCGCTGTCATTTTGGCGATTGTCCTCCTTGCAgacaaatttgcaataaaatacaTGAATCATGTAATCATATGTGTCCAGTTTCCTGTCATTCGgctgttattattaaaattgaaggACAGAAAGCTTCTATGCCTTGGGAAGTAGTCAAACCTCAATTTGTGAAAAAAGAACTGCCGTGTCCTGACTGTGTTGTCAAAGTTCCTGCTACGTGTTTAGgagAGCATGAAACTTCAGAGTGGCCTTGTTACATGTCGAAGCCTTCTAGTTGTCACCGGACTTGTGGTAGATTATTAGATTGCTCTAATCACACTTGTCATTTACTATGTCATATAGTTGAAGATGCTCCTGATAAGCTAAAGgcAGGATCAAATTGCGAGCAGTGCGAAGATAATTGCAGTAAAGATCGTCCAGAAGGTTGTATGCACGCATGTCCAAAACCGTGCCATCCTGGTGATTGTCCCCCATGTAAAGAAATGATAAGGATAAAGTGTTATTGCGGTCTCAACCAACCATACGTAACTTGCGCCGATTGGttaaatgatgaaaaaaaagaCGAATTACAAACTTGTGGCAACCAatgtccgaaaaatttcgattgTGGACACAGATGTAAATCAAACTGTCACTCGGGAACTTGTCCGGGTGCCGATCAATGTAAGAAAAAAGTTAAAGTGACTTGTAAATGCAAGCGAATTAAGAAGGAATTTTCCTGCGAGATCGTTCGCAAAAACGAAGCAATTGTACCTTGTGACGAAGTTTGTGCgctaaaaaaacaagaaaataaaaaaataagagaggcAGCTGAGGAACAGAAAAGGATCGAGGAAGAAGCCAAGAACAAAAAAGAGTTGGAAAAGTATCAAAAGATGTTCGAGGGAAAGAAAAAGAATAGAGAGAGGAAGCGATTCGAGGATGAAGTTGAAGATAGTTTTATGAGAAAATATTGGATTATACTAATTTCggtttttttaacctttatttcaATAGCTGTGTACTTTGCATTGCAATGA
Protein Sequence
MWRIKIHESKSTHVNFTNRAQQLIPVTINEKRIPFTNTAKYLGITLDAKIWTCVNCYGYFHLMCVQRWSKDTVTQLKNALHEQTVVHQHKVCWCCPKCRHEYESIDIPTKYLCFCTKTQNPKYDPYIAPHSCGQICKKPLKPECGHYCLLLCHPGPCPPCPVTVNVSCHCGSQPPRTQRCSKKEWSCNNVCGKQLKCDKHSCPNPCHPGKCQPCPKKNIQKCICKTQQKLRECASPTWQCDKICNKPLECGHHRCQETCHDGICDMCPLNKLRTCPCGKTSFQLPCTQETPTCLDTCEKLLDCGIHHCNLKCHREKCGVCLETVEKACRCGQHTKEVQCYKPYLCEVKCKQMKDCNKHSCNRKCCDGNCPPCEKPCGRTLNCGNHKCNSVCHRGPCYPCNETNDVSCKCGTTKLTVPCGRKSRTKPPKCSKLCSAPVDCHHEKRDPHRCHFGDCPPCRQICNKIHESCNHMCPVSCHSAVIIKIEGQKASMPWEVVKPQFVKKELPCPDCVVKVPATCLGEHETSEWPCYMSKPSSCHRTCGRLLDCSNHTCHLLCHIVEDAPDKLKAGSNCEQCEDNCSKDRPEGCMHACPKPCHPGDCPPCKEMIRIKCYCGLNQPYVTCADWLNDEKKDELQTCGNQCPKNFDCGHRCKSNCHSGTCPGADQCKKKVKVTCKCKRIKKEFSCEIVRKNEAIVPCDEVCALKKQENKKIREAAEEQKRIEEEAKNKKELEKYQKMFEGKKKNRERKRFEDEVEDSFMRKYWIILISVFLTFISIAVYFALQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01106860;
90% Identity
-
80% Identity
-