Basic Information

Insect: Agelastica alni
Gene Symbol: stc
Assembly: GCA_950111635.2
Location: OX467713.1:29221656-29232454[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.1 4.1e+04 -3.6 0.4 4 10 11 17 11 17 0.82

2 15 2.3e-06 0.045 15.4 12.4 3 19 25 41 21 41 0.93

3 15 0.74 1.5e+04 -2.2 0.6 5 10 66 71 66 71 0.94

4 15 1.2e-07 0.0024 19.5 12.1 3 18 79 94 77 95 0.91

5 15 1.1e-09 2.1e-05 26.1 12.7 1 19 135 153 135 153 0.99

6 15 1.5 2.9e+04 -3.1 1.7 6 10 183 187 183 187 0.97

7 15 1.1e-07 0.0021 19.7 14.6 4 19 200 215 193 215 0.87

8 15 1.1 2.1e+04 -2.7 2.2 5 10 244 249 244 249 0.93

9 15 0.00029 5.8 8.7 7.8 1 11 255 265 255 267 0.96

10 15 1 2e+04 -2.6 1.0 4 10 270 276 269 277 0.68

11 15 7e-10 1.4e-05 26.7 13.0 1 18 282 299 282 300 0.98

12 15 0.96 1.9e+04 -2.5 0.8 5 10 328 333 328 333 0.85

13 15 0.00032 6.4 8.6 12.6 1 19 339 356 339 356 0.83

14 15 6.1e-08 0.0012 20.5 19.7 1 19 392 411 392 414 0.96

15 15 0.0034 66 5.3 16.5 1 18 421 439 421 440 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.1	4.1e+04	-3.6	0.4	4	10	11	17	11	17	0.82
2	15	2.3e-06	0.045	15.4	12.4	3	19	25	41	21	41	0.93
3	15	0.74	1.5e+04	-2.2	0.6	5	10	66	71	66	71	0.94
4	15	1.2e-07	0.0024	19.5	12.1	3	18	79	94	77	95	0.91
5	15	1.1e-09	2.1e-05	26.1	12.7	1	19	135	153	135	153	0.99
6	15	1.5	2.9e+04	-3.1	1.7	6	10	183	187	183	187	0.97
7	15	1.1e-07	0.0021	19.7	14.6	4	19	200	215	193	215	0.87
8	15	1.1	2.1e+04	-2.7	2.2	5	10	244	249	244	249	0.93
9	15	0.00029	5.8	8.7	7.8	1	11	255	265	255	267	0.96
10	15	1	2e+04	-2.6	1.0	4	10	270	276	269	277	0.68
11	15	7e-10	1.4e-05	26.7	13.0	1	18	282	299	282	300	0.98
12	15	0.96	1.9e+04	-2.5	0.8	5	10	328	333	328	333	0.85
13	15	0.00032	6.4	8.6	12.6	1	19	339	356	339	356	0.83
14	15	6.1e-08	0.0012	20.5	19.7	1	19	392	411	392	414	0.96
15	15	0.0034	66	5.3	16.5	1	18	421	439	421	440	0.93

Sequence Information

Coding Sequence: atgtttagatACGAGCCTGGACTTATTCCACATGGCTGTGGCGAAATGTGTCTACGAAAGGGACGAAACTGCGAGCACAAATGTTCCATACTGTGTCATCCGGGACCTTGTCCGGATTGTACAATTATGATATCCAAATCCTGCGGTTGTGGAGCAACTCAACAGATGGTTAAATGTAGGACTGATGTTGATATAACGTGTAATTCCAtttgtaacaaattattagaATGTGAATTACATAACTGTCAGTTGTTATGTCATCCTGGTGAATGCCAACCTTGCGATAAGACAATTATTCAGGAGTGTTATTGTTCGAAAGAGGGTAGAAAGGTGCCATGTAGTAGTAAATACAAAGGTCAAACTCAGTATTCTTGCGGTGAAACATGTGGCAAACTATTATCGTGTGGAAATCACCGTTGCGAAAAGATGTGTCATGAAGGCTCGTGTGAAGTTTGTCCAATGGACGTTAATGTTGTTAAAACTTGTCCTTGTGGAAAAGCGCCCCTTAAAAACGAGAGGCTGTCTTGTTTGGATCCCATTCCATGTTGCGAGAAggtgtgcGGTAGAGTTTTAAAATGCGGCCAGCCTAACGTGCCGCATAGATGCCAGAAGATGTGTCACGAGGGTTCTTGTCCACCATGTCCTTTAACAACAGTTGTTAAATGTCGGTGTGGTCATATGGACAAAGAAATTCCTTGTCAAGAACTTACCACAAAAGCTGATGATGCCAGATGCCAGAAGAAATGTACCAAGaaacgaCAATGTGGAAAACACAAATGTAACCAACTCTGTTGTATAGAATTAGAGCATGTGTGCCCTCTTCCGTGCAACCGGTTATTGTCCTGCGGACAGCACAGGTGCGAACGAACATGTCATTCAGGTCGTTGTGCACCTTGCGTTGAAACCAGTTTCGAGGAACTGTACTGCGAATGTGGAGCCAGCGTGATTTATCCCCCCGTACCGTGCGGTACTAAACCACCTAACTGCAATAAACCGTGTTCAAGATCACGGTCTTGCGGTCATGACGTTAATCACATGTGTCACACGGGACCCTGTCCTCCTTGCACGGTTCTATGCAAACGATGGTGCTACGGACGCCATGAGCAAAGATCTGCCATCCCTTGTCATCAGGAGAACTTTAGTTGCGGTTTAGCTTGTGGGAAAGATATGCCTTGTGGAAAACATAAATGTATTAAACCTTGTCATGATGGTCCTTGTCCCACGCCTTGTAAGCAACCGTGCACTGTTCCTAGAGAATTATGTGGTCATTCCTGTGGCAAGCCGTGCCATGATCCACCCTGTCCAGAAAGTAGTTGTAAACAGTTGGTCCCAGTTACATGTCAGTGTGGTTTGCAGAAAGGTACAAGACCATGCATAGAAGTCGCCGATGAATTTAAACATATCCAGATGACTaggttaaaagaaaaaatgggaAGTTTGTCTACAAATTCTACCGTTGATTTATCAGATATCGTAAATGGATTTAAAAAACCAACGGttcttaaaatatTGGAATGTACAGAAGAATGTCGTGTTTTGGATAGAAACAAAAGATTAGCGATTGGTTTGCAGATTCGCAATCCAGATTTAAGTCAAAAGCTCACACCAAGATATTCAGATTTTATGCGACAATGGACCAAAAAAGATCCTCATTTCTGTCAAAGAGTTCACGAAAAACTTACAGAACTTGTTAAGCTTGCCAAGAGTAGCAAACAAAAAAGCCGCTCGTATTCCTTTGAATCAATGAACAGAGATAAAAGGCACTTTATACACGAGTATTGTGAACATTTTGGAATAGAAAGTGTCGCGTATGATATGGAGCCAAATAGGAATATCATAGCTACTGCTCTTAAAGACAAATCTTGGTTACCTAGTATGAGTCTGTTAGAATTTATACAAAGAGAAAATGGTCAGAGGAAAGTACCGGGACCGGTACTAGGGCGTGGCCCGAGTAGCAAAATGGAAACGGTGTCCTTAAAGTTGCCTAGTAGAGTACAAAGGCCGAATACACCTCCTAATGAAATAATTGAAAATGTCAGACCGTCATAG
Protein Sequence: MFRYEPGLIPHGCGEMCLRKGRNCEHKCSILCHPGPCPDCTIMISKSCGCGATQQMVKCRTDVDITCNSICNKLLECELHNCQLLCHPGECQPCDKTIIQECYCSKEGRKVPCSSKYKGQTQYSCGETCGKLLSCGNHRCEKMCHEGSCEVCPMDVNVVKTCPCGKAPLKNERLSCLDPIPCCEKVCGRVLKCGQPNVPHRCQKMCHEGSCPPCPLTTVVKCRCGHMDKEIPCQELTTKADDARCQKKCTKKRQCGKHKCNQLCCIELEHVCPLPCNRLLSCGQHRCERTCHSGRCAPCVETSFEELYCECGASVIYPPVPCGTKPPNCNKPCSRSRSCGHDVNHMCHTGPCPPCTVLCKRWCYGRHEQRSAIPCHQENFSCGLACGKDMPCGKHKCIKPCHDGPCPTPCKQPCTVPRELCGHSCGKPCHDPPCPESSCKQLVPVTCQCGLQKGTRPCIEVADEFKHIQMTRLKEKMGSLSTNSTVDLSDIVNGFKKPTVLKILECTEECRVLDRNKRLAIGLQIRNPDLSQKLTPRYSDFMRQWTKKDPHFCQRVHEKLTELVKLAKSSKQKSRSYSFESMNRDKRHFIHEYCEHFGIESVAYDMEPNRNIIATALKDKSWLPSMSLLEFIQRENGQRKVPGPVLGRGPSSKMETVSLKLPSRVQRPNTPPNEIIENVRPS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -