Aaln010019.1
Basic Information
- Insect
- Agelastica alni
- Gene Symbol
- gata5-b
- Assembly
- GCA_950111635.2
- Location
- OX467709.1:16747035-16766141[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.81 5.3e+03 -1.2 0.1 9 20 51 62 50 64 0.81 2 2 1.8e-16 1.2e-12 48.9 3.6 1 34 271 303 271 305 0.98
Sequence Information
- Coding Sequence
- ATGCTCCGTAATTGTGTCTGCAGGGGTTCAGCAAAAATCATATTTGATCTAGTGAAACCTCCGAGCCTATTGCATTACACCAACGAGTCTCATTTGCCGGAATTATCTACAAATTTGGTAGTTAATCATGATTTCAACCGTTTCGTAGATACTAAAGATTGGAATAACGCGAATAACAATACCTGTTCTGTCGAGCCGACAGATCTTTCcagtaaaaaatctgaaaaattgACGTGCGTACCGGAAATAGGATATATCAAAGAAGAATTCGACGCCGTTTCGGTATCCAGCAATAGTTCGGATCCGGAAAGGTTGGAAGTGGACATGTCAcagATAACGGAAGAACATGACGATTCGACGAACAGTGAAACCTCCCCAGCGTCCGAATCGCCGTCGACGCTACTAAATCCATCGGACGTCGATCCGGCCGTGTGGCAGGCTCTCTCTCGCAACGGTTACGATCCCTCGTTGAGTGGCGAGGCGAGTCAATTACtaagaaaattaataacgtGTCGAAAATTGGGGATGACCATAACGCCTACCAAACCGCACGTCCTTAATTACACACTTTTTGACGAAAGACAGAAAAGTGCCGAAGCAACAAACGCCGACAAAAATTTAGAGAAAAATTCCAATACCGGCAGGAGGAAACAGAGTTATCCGACGAAGGCTACGGTTCAATCGGAAGTTACGCCGATGGAACAGGATAACGAAAATGAGGAGTACGGGCCAGATTTTACGGGGAACAATCCTTGGTGTAGTTTGGTTAAAGGGAAAagaATGGAGATATCGAAACGATGTGCCTTGTCGTGTACGAACTGCGGCACGCAAACGACGACGATCTGGAGAAGAAACTTAAGGGGAGAAATGGTGTGCAATGCTTGCGGCCTCTATTTCAAATTGCATGGCATAGATAGACCAGTTACGATGAGAAGAGATACAATCCACACGAGGCGTCGAAGGCCTAAAGTTGCCGAAAGAGAAAAATCTAACGTTGCAGGTTCCAAAGAGAAAGGCGGTACCAACAATGATTCTGCCGAGACGGAAGACTTGCTAACGGCGCTGCGACGACAACTACAACCGCATCTAATATTGGCGTTGCAGGGGCATCGACACAACACCGACAATTCCAATACAGACGGCTGCGGTGGTGCGAGAGTTCCATCTCGCGCTCACACACAGGGTCCGACGCTACCAAAATTCTTGCCAATAGAAAAAAACAGCGGCGTGTCTGCAAGGGAAGCCGATTCGGACGAAGACAGCATAGCAGATTTACCGTTAAATCTTGTTTCCACGCACATGACTGAGGGTGAACTATTTTAA
- Protein Sequence
- MLRNCVCRGSAKIIFDLVKPPSLLHYTNESHLPELSTNLVVNHDFNRFVDTKDWNNANNNTCSVEPTDLSSKKSEKLTCVPEIGYIKEEFDAVSVSSNSSDPERLEVDMSQITEEHDDSTNSETSPASESPSTLLNPSDVDPAVWQALSRNGYDPSLSGEASQLLRKLITCRKLGMTITPTKPHVLNYTLFDERQKSAEATNADKNLEKNSNTGRRKQSYPTKATVQSEVTPMEQDNENEEYGPDFTGNNPWCSLVKGKRMEISKRCALSCTNCGTQTTTIWRRNLRGEMVCNACGLYFKLHGIDRPVTMRRDTIHTRRRRPKVAEREKSNVAGSKEKGGTNNDSAETEDLLTALRRQLQPHLILALQGHRHNTDNSNTDGCGGARVPSRAHTQGPTLPKFLPIEKNSGVSAREADSDEDSIADLPLNLVSTHMTEGELF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -