Aaln013776.1
Basic Information
- Insect
- Agelastica alni
- Gene Symbol
- pnr
- Assembly
- GCA_950111635.2
- Location
- OX467709.1:70751672-70784049[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-17 8.3e-14 52.5 1.8 1 35 297 330 297 331 0.97 2 2 1.4e-17 9.5e-14 52.4 7.6 1 35 353 386 353 387 0.97
Sequence Information
- Coding Sequence
- ATGGAATCGAAAGATGAACCAAATCCACCACCTGAAGATGTTAAACCGAAACTGGACGCATCCGAGCCGGATCAACAACTACCACAGGTTATGGTTCCGTCTGCCACCGGCGTGATCAGAAGAAATTTCATAACAACAGCCGGTACCATAGTCGAAACCAACGAAGAACAACCTCCCGAAGCGAATCACGAAGAAATTGTAAACACATCAACGTCCACGCCACAACAATTAAGTCCGACTGACACCAAAATGGAGACGTTAGATACGACAAATACCTATCAGGAGTTACATCAGCAAGAACAAAGAGAACAATTTCAGGATGCCAAACGTTATACTGTCGAAGTTTCTGCAGAAGGTTTTCATAATCCGAATTTTTCGCAAGAAATCAGCTACACCACGGTCAACATTGAAGGAAACGTGGTACCCATCACGATTTCTTCTGATATAGAACAATCCGGTGAATACGCCAACCTGCAAACTGCTCAATATAACAACGGCTACACCGACGGCCCTCAATACTTGGCTCAACATCAGTACCAAAATTTGTACGTAGAAAGAACTGGAGTAGGCAATTCTCCATTATACAAGGACGACCCGAATTTAGCCGCTTCAAGATATCAAGCTCTTTATCAGGCTAACTATGACGTATCCAGCAGCCTTTCCCAGCTCAACCTGCTTTCCACATCGGGTGAAACGTATTACGCAACACCTGGAAATTGGCCGTCGACTAGTAGCGGTGCGTATCAGCAACAATACGCGAACAACACCAACGTTCTTCATCAAGCAGACAGCACCCAGTCGTACGGCGGTTCGTTCGCAAATTCAACTTGGTCGACGAGTCCGATAGACGAAGGACGACAACCAAGACAAGAGGTACTTGTGAAAGAGTGCGTTAATTGCGGCGCTAGCGTTACACCGCTTTGGCGTAGAGACGGTACCGGTCATTATCTATGTAACGCATGTGGTTTGTACCATAAAATTAATGGGGTACACAGACCGCCGCTAAGACCTACCAAAAAACCACAGGCGACAGGAAATAGAAGAAATGGCGTTGCTTGCGCAAattgtaaaacaaataataCAACACTTTGGCGAAGAAATAATCAAGGAGAACCAGTCTGCAACGCTTGCGGACTATACTACAAATTACACAACGTTAACCGACCGATCAGTATGAAAAAAGATGGTATCCAAACACGTAAACGGAGACCGAAAAATTCCAATGGCACTCCAGGAACGTCGGGTCAAATGAGAATGGGAGCATACCAGTATCAGTCCCCACCGGAGTTGGAACTGCAACAGGATCAGTATCAATTACCGATAAGCGTTTATGCCCAACAACCCCAAAGTGCATACAGACAATTCACCACCGAAAATATTCGAAGCCTAAAtaCTCAGCCATTGCAACCGATAATACCTGCAGACGACGAACAAGCAAGCGTCATAACATCAACATCCCAACAAGTCAGATTCAGGAGTGATGGTGAAGAAGACGATGGTAGTAACAACCCTTCTACACATAACTAA
- Protein Sequence
- MESKDEPNPPPEDVKPKLDASEPDQQLPQVMVPSATGVIRRNFITTAGTIVETNEEQPPEANHEEIVNTSTSTPQQLSPTDTKMETLDTTNTYQELHQQEQREQFQDAKRYTVEVSAEGFHNPNFSQEISYTTVNIEGNVVPITISSDIEQSGEYANLQTAQYNNGYTDGPQYLAQHQYQNLYVERTGVGNSPLYKDDPNLAASRYQALYQANYDVSSSLSQLNLLSTSGETYYATPGNWPSTSSGAYQQQYANNTNVLHQADSTQSYGGSFANSTWSTSPIDEGRQPRQEVLVKECVNCGASVTPLWRRDGTGHYLCNACGLYHKINGVHRPPLRPTKKPQATGNRRNGVACANCKTNNTTLWRRNNQGEPVCNACGLYYKLHNVNRPISMKKDGIQTRKRRPKNSNGTPGTSGQMRMGAYQYQSPPELELQQDQYQLPISVYAQQPQSAYRQFTTENIRSLNTQPLQPIIPADDEQASVITSTSQQVRFRSDGEEDDGSNNPSTHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -