Aaln038345.1
Basic Information
- Insect
- Agelastica alni
- Gene Symbol
- znf521
- Assembly
- GCA_950111635.2
- Location
- OX467714.1:36174236-36177289[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0001 0.025 16.6 0.2 3 21 143 161 142 162 0.96 2 10 0.0027 0.66 12.2 1.2 3 23 185 206 184 206 0.88 3 10 9e-06 0.0022 20.0 0.8 1 23 212 234 212 234 0.98 4 10 6.7e-05 0.016 17.2 1.8 1 23 240 262 240 262 0.97 5 10 9.1e-06 0.0022 20.0 2.0 1 20 268 287 268 291 0.95 6 10 9.1e-05 0.022 16.8 0.9 1 23 299 321 299 321 0.99 7 10 0.00021 0.051 15.7 3.0 1 23 327 349 327 349 0.98 8 10 0.002 0.48 12.6 0.8 1 23 355 378 355 378 0.96 9 10 5.1e-05 0.012 17.6 0.3 1 23 392 414 392 414 0.97 10 10 1.3e-06 0.00032 22.6 2.4 1 23 420 443 420 443 0.97
Sequence Information
- Coding Sequence
- ATGTACGAGTCTCTGGGTTTAAACCCGGTTGTACCAAGAGAATCGTGTGAGCCTACAAATgaCTGGAATCGCCCATTTCAAGTATGTACATTCTGTTCCCAGCGGTTGAATGATGTACATTCTTTTAGagcattatgtattaattcTTATAAGTGGTATTGGTCATTAAAAGATAcagcaaatattaaaaaagaaggaTCACCTTGTAAACAAGAATTAGCAGAAAGTATTGAAAAAGAATATAATTCTACAGCTAACAATAATTGTGATGATGatggtgatgatgatgatgacaattcatcatttgaaaataatccagaaTCAGAAAATGATGACGATTCAAATTCAGATTTTAAAGCAGATTTTGTTGaaccaaaaccaaaaaaaagaaaaaaagaaaaaacatttcaagATAAGAAAGTTTTATGCAAGATTTGTGGGAAACAATATGcatcaaaatatgttttaaagaaGCATATTAAAATTTGTGAGCTAAAACATGACAGTGGTAATGCAGATGGTGGTGATAATGATCAAAAGGCGGCTCCATCATGTTTAGAATGTGGACtgacgtttaaaaataaatatatgcaaaAAAGACATTTTGATAATGTCCACAACAGAGAGAAAAAGTTTACATGTGATATTTGTAATAGAAGTTTTGCATCGATGGTTTATTTGAATGCACATAAAAGATACCATTCTGGCGATAGACCTCATGTATGTTCATTTTGTGGTAAAGGTTACATAACAGCCAGTGATCTGTATCACCATGAGAAAATTCATGCAAATAAACGAAATTACAGATGCGAGATATGTCCTAAAGCATTTAACACCTCGTCCGATTTGTATAAACACAAGATGTGTGTACATATGGACAGATCTCAATGGAAATACACGTGTGACGTGTGCGAAAAAAAGTTTCCGTTGAAAATCAACCTTGACAGCCATAAAAAGACGCACACAGGAGAGAAGAATTTTCCGTGTCATTTGTGCGATCGAAAATGCATTAATATGTCAGTATTAAAACGCCATATAATAACGCATTCCCATCTGTATCCGTTTAGGTGCGAGGTGTGCGATCAAGGTTACAAATTTCAAAAATCTCTAGATATTCACAAATCAAAGGCTCACGGAATCGGTAATATCAAGGTAAAACCTTGCGTCAAAAAGTTCATTTGTCCACTGTGTAGTAAAGCTTATACAGCCAACAATAAGTTGCAGAAACATCTGAGAGCACATGTGGGAGAGAAACCGTTCAAATGCCCGGAATGTCACAAGGGATTCACCGATAAGAGTTACATCAAGcaacatttgaagattttgcaTAACATACCTGGCGATGATTCAATTTAA
- Protein Sequence
- MYESLGLNPVVPRESCEPTNDWNRPFQVCTFCSQRLNDVHSFRALCINSYKWYWSLKDTANIKKEGSPCKQELAESIEKEYNSTANNNCDDDGDDDDDNSSFENNPESENDDDSNSDFKADFVEPKPKKRKKEKTFQDKKVLCKICGKQYASKYVLKKHIKICELKHDSGNADGGDNDQKAAPSCLECGLTFKNKYMQKRHFDNVHNREKKFTCDICNRSFASMVYLNAHKRYHSGDRPHVCSFCGKGYITASDLYHHEKIHANKRNYRCEICPKAFNTSSDLYKHKMCVHMDRSQWKYTCDVCEKKFPLKINLDSHKKTHTGEKNFPCHLCDRKCINMSVLKRHIITHSHLYPFRCEVCDQGYKFQKSLDIHKSKAHGIGNIKVKPCVKKFICPLCSKAYTANNKLQKHLRAHVGEKPFKCPECHKGFTDKSYIKQHLKILHNIPGDDSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -