Aaln001532.1
Basic Information
- Insect
- Agelastica alni
- Gene Symbol
- zfy1
- Assembly
- GCA_950111635.2
- Location
- OX467708.1:12365796-12383685[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.018 4.5 9.6 1.3 2 23 105 126 104 126 0.94 2 29 0.014 3.5 9.9 3.5 1 23 132 154 132 154 0.98 3 29 0.017 4.2 9.7 4.1 1 23 157 179 157 179 0.96 4 29 0.00018 0.044 15.9 0.3 2 23 186 207 185 207 0.96 5 29 0.04 9.9 8.5 0.7 1 16 216 231 216 233 0.86 6 29 0.059 14 8.0 0.9 3 22 279 298 277 300 0.86 7 29 5.7 1.4e+03 1.7 3.4 1 23 305 327 305 327 0.95 8 29 0.00045 0.11 14.6 1.2 1 23 330 352 330 352 0.98 9 29 0.0003 0.073 15.2 0.9 2 23 389 411 388 411 0.95 10 29 5.7e-05 0.014 17.5 2.1 3 23 422 442 421 442 0.98 11 29 0.012 3 10.1 3.5 1 23 448 470 448 470 0.97 12 29 0.52 1.3e+02 5.0 0.5 1 13 476 488 476 489 0.89 13 29 3.2 8e+02 2.5 1.7 2 23 538 559 537 559 0.88 14 29 0.0029 0.71 12.1 2.2 1 23 565 587 565 587 0.98 15 29 0.0052 1.3 11.3 3.5 1 23 590 612 590 612 0.98 16 29 7.9 1.9e+03 1.3 4.3 2 23 619 640 618 640 0.85 17 29 0.00011 0.026 16.6 0.3 2 23 648 670 648 670 0.93 18 29 0.041 10 8.5 0.5 2 23 680 701 679 701 0.97 19 29 0.0016 0.4 12.9 0.1 1 23 707 729 707 729 0.97 20 29 0.079 19 7.6 0.8 1 12 735 746 735 748 0.92 21 29 4.7 1.1e+03 2.0 0.5 2 19 821 838 820 842 0.70 22 29 0.65 1.6e+02 4.7 3.8 1 23 848 870 848 870 0.97 23 29 3.3 8e+02 2.5 4.6 1 23 873 895 873 895 0.93 24 29 1 2.5e+02 4.1 3.5 2 23 902 923 901 923 0.90 25 29 4.7e-05 0.011 17.7 0.4 2 23 933 955 932 955 0.92 26 29 0.44 1.1e+02 5.2 0.6 2 23 965 986 964 986 0.96 27 29 0.00031 0.076 15.1 0.0 1 23 992 1014 992 1014 0.97 28 29 5.6e-05 0.014 17.5 3.0 1 23 1020 1042 1020 1042 0.99 29 29 0.00047 0.11 14.6 0.3 3 21 1050 1068 1048 1069 0.92
Sequence Information
- Coding Sequence
- ATGTCATTTTTGGCTCTTTGGAAATCTAAGCCATccaataaaaaattagttaaaaattcgGAGAAAAAACCGATCGTAAGACCAATAAAGACGtctagtttaaaaattaaagaaaaaaccgtCGAGgccgacgacgacgacgacgactaCGTCGAAGAAGTCGGATCGacgtttaaaaaagtaaaggaAGTGAAATGCCGCAAAAAAAGAGAGAAGAAACCGAAAAAGCCGTCTCTCAGAGAAATCCAAAGGCTGCTGCAAAAAGACAGCAATCCGAACATCATCAATCTCGACGAATTACCCAATCCCTTGGTATGTCCGGTGTGCAAGGAATCATTTCACACTAACAGAGAATACGCTTACCATTCTTCGAAACACAACAGCGACAGTCAGTACACTTGCCATTTTTGCGATTACAAAACCGAAGAGAAAAAACAAATCAAGGCGCACATGATGCAGCACAGCGTCTTCAAATGCAAAGTGTGCGagaaaattttcaagaaaagACATTCGGCCTACAAGCACGGCGAAAGGCACATGGAAAATAACAGAGTACAGTGCGAAATTTGCGGCAAGAGTCTGCAAAGTCAGTCGTTAAAGACTCACATGAAAATCGTGCACTCCGACGAACTCAACGACGCACGACATTACTGTCCCATTTGCAACAAAGCATACAGATCCAGTAGAAAGTATTCGAGAAACAATACCAACACCAAACTTGCTCGGCAGTCTCAAGATCTAAACTCAAATTTGTCTGAATTAAAATGTTCTTTTGACGACAAATTATTTGCAGAATATATCGAAAATACAACGGAATTAAAAACGCCCGTCAATTGCAACGTTTGCAATAAGGAATTCAGCACTAATCTTGATTTTGGTTTGCACTCATCCGCGCACCACACAAAGAAATTATACCAATGCCATTTGTGTGTTTTCGAAACCAAAAAAGAGAACACCTTTAAAGGACACCTGACGAATCACAACAAATACGTCTGTAAACTTTGCAACGTACCGTTCAAACGGAAACAATCCGCATTCAAGCATATCAAGCTCCACGAGCAGCCCAAATTGAAGAATTGCAGATATTGCGGCAAACAAATGCTGAAACAACTTTTAAAACACCACAACGTGGCCGAACACCAAGGACGATCGCCAGGAGCTGTCAAATGTTCGGTTTGTTCCAAGGAATATTTCGACAAAGACAGTCTGAAGCGCCACTACGCCTCCCAGCACAAAGAATTCGGCGTCGATATTACGAAAATATGTGAATTGTGCGGTAAAGAATGTCCTAACAATCAATTGTTGCGAAGACACCGACGAACACACTTTGGAGAGAAGCGGTACGCGTGCGCGCAATGTCCCAAAAAGTTTTCTTTCAAAATGTCGCTGAATTGTCACATGTCCAAACATACAGGAATCAAGCCGTTCGCTTGTAATTCCTGTGATAAATCTTACAGATCCTCGGTACGTAAAAGCAGCAGAAAACCCAAACAAGAGACAGCTAAAAAGAAGGAAGTCACCACGGAAAAGACTACCAAACGACAGAAGAAGTCTGACGTAGAATATAACCCAGACGAAATCATAAATCTCAACGAAATAACCAAACCTTTAATATGCAAAATGTGCTCCAAAGCATTCCTTACGCACATAGAATTCGGCTATCATTCGAAGACCCATGACGACGAGGGAGTGTACCGATGTCACTTGTGCGACTACATTGGCGAATCGAAGGACTCCTTTAAAAGGCATGTGAGTTCTCACGATGTATTCAAATGCAAAAAGTGTGACAAAATACTCAAAACGAAATTCTCTGCTTACAAACACGTAAAATCTCACCGAGCTCCCACCACAGTACAGTGCGAACTGTGTGGAAAGCATCTCAAAAAACAATGCCTTTACTTACACAAAAAATCAGTCCACGCTGCTGTCAAAGTGCTAGCTAAGTGCCCCATCTGTGGTAAGGAGTACCAAAACTCTGGTAGCTTGCGACAACACTACTCGGCATTTCACAAGGAAATGGGCATCGATATGTCAGTCGTCTGCGACATTTGTGGCATGCGTCTATCCTGCAAAGCGACACTCGGTCAACATCTGCGCACTCACACCGGCGATAAACCTTTCGCTTGTTCAACGTGCCCCAGGAGATTCATTTCCAAAGATATTTTGGTGGCTCACGTGAGAGTGCATACTGGAGAGAAACCGTACGAGTGTAAATTTTGCGGCAAGAGGTTCGCCCACGGTGCTCCATACAGATCGAAGAAGAAACGGACGTACCAAAAGAGAAACGTCAAAATTGATTTCGATTTCATAGACGTAGAAGAGGGCGGCGCTTTGATCAAAGAAGATCCAGATATGAATCTACCGAATTTCAAACCGAATTCGAAAAGGCGCGACAAAACCTCGCAGCCGGAATTGGTTTTGGAAAAATTCATCAATTTAAACGAAGTAACGAAACCACTGATTTGCAAAGTTTGTTCCAAAGCGTTTCTGACGCACATCGAATACGGTTTGCACTCGAAACTTCACAACTCCGATGGTTTTTATTCGTGCCACATGTGCGATTACCGCAAAGAAGCAAAAAAGTCATTCAAGGTGCACATCAAAAGTCACGACTTGTACAAATGCGAAAAGTGCAACAGAATCTTGAAAAGCAGACTGTGTGCGTACAAACACTCGAAATCCCATTCGGTGCAGAATACGGTGCAGTGCGAAATTTGCGGCAAACACCTGAAGAAACAGTGTCTTTCCATACACAAGAAAATACTGCACAGCGACGACAGAGCCAATCTTATCACGAAATGTCCGATATGCGACAAGGAATACCAAAATCCCAGCAGTCTGAGGCAGCATTATTCGGCGTTTCACAAGGAGCTCGGTATCGACGTGTCCGTGGTGTGCGACATTTGCGGCATGCGGCTATCCTGCAAGGGCAAACTACCTCAGCATTTGCGTACTCACACCGGCGACAAACCGTTCGCTTGCAACATTTGCCCGAAAAAATTCATCGCCAAAGACATCCTCGCCGCTCACATGCGCGTCCACACTGGAGAAAAGCCATATGAATGTAAATTCTGTGGCAAGAAATTCGCACACAGCGCCCCCTATCGCTATCACATCAAGACGCATACTGGCGAGAAGAAACACTTGTGTCCTTTGTGCAATAAAGGCTTCATCTCTAAAGCCAACATGAAGATCCATCTCAAGAGTTGTATTATGCCATTGAGATAA
- Protein Sequence
- MSFLALWKSKPSNKKLVKNSEKKPIVRPIKTSSLKIKEKTVEADDDDDDYVEEVGSTFKKVKEVKCRKKREKKPKKPSLREIQRLLQKDSNPNIINLDELPNPLVCPVCKESFHTNREYAYHSSKHNSDSQYTCHFCDYKTEEKKQIKAHMMQHSVFKCKVCEKIFKKRHSAYKHGERHMENNRVQCEICGKSLQSQSLKTHMKIVHSDELNDARHYCPICNKAYRSSRKYSRNNTNTKLARQSQDLNSNLSELKCSFDDKLFAEYIENTTELKTPVNCNVCNKEFSTNLDFGLHSSAHHTKKLYQCHLCVFETKKENTFKGHLTNHNKYVCKLCNVPFKRKQSAFKHIKLHEQPKLKNCRYCGKQMLKQLLKHHNVAEHQGRSPGAVKCSVCSKEYFDKDSLKRHYASQHKEFGVDITKICELCGKECPNNQLLRRHRRTHFGEKRYACAQCPKKFSFKMSLNCHMSKHTGIKPFACNSCDKSYRSSVRKSSRKPKQETAKKKEVTTEKTTKRQKKSDVEYNPDEIINLNEITKPLICKMCSKAFLTHIEFGYHSKTHDDEGVYRCHLCDYIGESKDSFKRHVSSHDVFKCKKCDKILKTKFSAYKHVKSHRAPTTVQCELCGKHLKKQCLYLHKKSVHAAVKVLAKCPICGKEYQNSGSLRQHYSAFHKEMGIDMSVVCDICGMRLSCKATLGQHLRTHTGDKPFACSTCPRRFISKDILVAHVRVHTGEKPYECKFCGKRFAHGAPYRSKKKRTYQKRNVKIDFDFIDVEEGGALIKEDPDMNLPNFKPNSKRRDKTSQPELVLEKFINLNEVTKPLICKVCSKAFLTHIEYGLHSKLHNSDGFYSCHMCDYRKEAKKSFKVHIKSHDLYKCEKCNRILKSRLCAYKHSKSHSVQNTVQCEICGKHLKKQCLSIHKKILHSDDRANLITKCPICDKEYQNPSSLRQHYSAFHKELGIDVSVVCDICGMRLSCKGKLPQHLRTHTGDKPFACNICPKKFIAKDILAAHMRVHTGEKPYECKFCGKKFAHSAPYRYHIKTHTGEKKHLCPLCNKGFISKANMKIHLKSCIMPLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -