Basic Information

Insect: Agelastica alni
Gene Symbol: -
Assembly: GCA_950111635.2
Location: OX467710.1:74178979-74185186[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3e-05 0.0072 18.4 2.4 2 23 201 222 200 222 0.98

2 11 2.1e-06 0.00051 22.0 1.3 1 23 228 250 228 250 0.99

3 11 2.7e-05 0.0066 18.5 4.9 1 23 258 280 258 280 0.97

4 11 0.00037 0.09 14.9 1.5 1 23 286 308 286 308 0.98

5 11 0.0007 0.17 14.0 0.7 1 23 320 342 320 342 0.96

6 11 1.4e-07 3.4e-05 25.7 1.5 1 23 348 370 348 370 0.98

7 11 7.9e-06 0.0019 20.2 0.5 1 23 376 398 376 398 0.99

8 11 5.1e-07 0.00012 23.9 0.9 1 23 404 426 404 426 0.98

9 11 4.2e-05 0.01 17.9 1.5 2 23 433 454 432 454 0.97

10 11 2.8e-05 0.0069 18.4 0.1 1 23 460 482 460 482 0.99

11 11 4.5e-08 1.1e-05 27.2 0.5 1 23 488 510 488 510 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3e-05	0.0072	18.4	2.4	2	23	201	222	200	222	0.98
2	11	2.1e-06	0.00051	22.0	1.3	1	23	228	250	228	250	0.99
3	11	2.7e-05	0.0066	18.5	4.9	1	23	258	280	258	280	0.97
4	11	0.00037	0.09	14.9	1.5	1	23	286	308	286	308	0.98
5	11	0.0007	0.17	14.0	0.7	1	23	320	342	320	342	0.96
6	11	1.4e-07	3.4e-05	25.7	1.5	1	23	348	370	348	370	0.98
7	11	7.9e-06	0.0019	20.2	0.5	1	23	376	398	376	398	0.99
8	11	5.1e-07	0.00012	23.9	0.9	1	23	404	426	404	426	0.98
9	11	4.2e-05	0.01	17.9	1.5	2	23	433	454	432	454	0.97
10	11	2.8e-05	0.0069	18.4	0.1	1	23	460	482	460	482	0.99
11	11	4.5e-08	1.1e-05	27.2	0.5	1	23	488	510	488	510	0.98

Sequence Information

Coding Sequence: ATGGAAGTTAAAGTGGACTCGGCTAACATTTTCGATTTGAGTAAAATTTGTAGGGCTTGTTTGACGGAAAAGGGCGAAATGCGATCCGTTTTCATGCAAGACGATTCTTCAGGACAACCATTAATTCTGGCAGAAATGATAATGGAGTTTACCTCGTTACAGATTAAAGATGATGATGGATTACCTAATCTAATTTGTTTACAATGTTGCCATGAGGTAACGAGATCATATTCCTTCAAACAACTTTTTGAACAAAGTGACATAAATCTTCGGACGTACTTGGGCAAACCAATTGATCAAAGTCAGAAACAAAATAAGGAAGAATCAATACAACAAAACGATTTTTCAGGACATTTCTTACTAGATAATTTTGAAATTGATTCATCATCAGAAAgtagtgatgatgatgatttcaAAGATGAATTGATAGCATTACAGGCTACTTTACCAGAGCATTCTAATGATGAAAAGGTAATTGCTCAAAAGCAACTTCTCAAGGCTGCAAAGTTTCATAAAAGTAGAAACTCTAGGAGAAAAATGTTAGCTAAGGGAGGAAAAGCAGCagtattagcAGCTAAAAGAATGAAACGAAATGTAAATCAGTGCAATGTTTGCAAAAAAcaatttatcaatttaaaatccTTTCGAAAACATCTTAGAATCCATATAGAAGACCGGCCATTTAAGTGCAAACTTTGCCCAAGGGGATTTAccgaagaaaattatttaaataatcataTGAGAACACATGTACCAGAAGATCAGAAACCTCACGAGTGCGAAATATGTAAAAAACgttttatacacaacactttGTTATCCAAACACATGCTGAAACACACGGGCGAGAAACcatttgtttgtaaaatttgcAATAAAGGGTGTTACGCTGAAAATAGTCTTTTAAAACATATgaaaatacatgaaaaaaaagAAGGAGATCCAAGATTGTTAAAACATATTTGTGATTATTGTAAAGTCGAGTTTCCTGATAATCAGACTCTTTCTATACATATCAAGCAACATACAGGAGACAGGCCGTTTGTCTGTAATATTTGTGGAAAATGTTTTCCTCAAAGATTCAATTTGGAGTTACATGCAAGGACACATACAGgtGAGAGGCCATTCCAATGTGAAGTCTGTAAAAATGGTTACGTATCAAAAGCAAGTCTTAAAATTCACATGAGAACACACACCAACGAGCGCCcttttgtttgtaatttttgtgGTAAAGCTTTTAGACAATCTGGAGATTTAACCAGTCATAAGCGACTTCACGGAACAGAAAAACCCATCGAGTGTTCCgtttgtcaaaaaagatTTACAACAGTCATGAAATTAAAGTATCATATGAGAAACCACACAGGAGAACGCCCATACGTCTGCAGCGTATGTGGTCGCGGATTCACAGTGAATACCATTTTGCTACGTCATATGAGAGTCCATTCTGGTGAACGTCCATATGTATGTGTTACATGTGGAAAAGCTTTTTCCCAATCTAGTACCCTTAATACACATATGAAAGTTCATGCTTCCAATACAAATAATCATGAAAGGACACCTAAATATGAGTCTGCCGAAGAACAAAAATATCAACCCCCGCCGCAATCGCAGCAAGATCCTAATAGGCTGATGCAACAGCAAGATAACAGAATGTTGATACAAACACAACAGCTTAGTGACGGTACCAGAATAATTACAGACACCACACAGTTACTTGGTGATCACAGAGGGTTACTTAATGATACTAGgcTTCTTGTGAATGTGACTGAACCACCTCCTTTAAGACTGCTTGTAAACGACAACACAAGATTGATTTCTAATGATAATCGATTGCTAACTCAAGATAACCGACTTATTGCcaatgttaatgttaatgaTAATAGACTTTTAAGTGACAATACAAGACATCTCTCAGTTTTGGATGGTTCAAGGATACTAACAAGTGATAAATATTTGGCGCCGTACGATCCGTATCAGAGAGGAcatttgtaa
Protein Sequence: MEVKVDSANIFDLSKICRACLTEKGEMRSVFMQDDSSGQPLILAEMIMEFTSLQIKDDDGLPNLICLQCCHEVTRSYSFKQLFEQSDINLRTYLGKPIDQSQKQNKEESIQQNDFSGHFLLDNFEIDSSSESSDDDDFKDELIALQATLPEHSNDEKVIAQKQLLKAAKFHKSRNSRRKMLAKGGKAAVLAAKRMKRNVNQCNVCKKQFINLKSFRKHLRIHIEDRPFKCKLCPRGFTEENYLNNHMRTHVPEDQKPHECEICKKRFIHNTLLSKHMLKHTGEKPFVCKICNKGCYAENSLLKHMKIHEKKEGDPRLLKHICDYCKVEFPDNQTLSIHIKQHTGDRPFVCNICGKCFPQRFNLELHARTHTGERPFQCEVCKNGYVSKASLKIHMRTHTNERPFVCNFCGKAFRQSGDLTSHKRLHGTEKPIECSVCQKRFTTVMKLKYHMRNHTGERPYVCSVCGRGFTVNTILLRHMRVHSGERPYVCVTCGKAFSQSSTLNTHMKVHASNTNNHERTPKYESAEEQKYQPPPQSQQDPNRLMQQQDNRMLIQTQQLSDGTRIITDTTQLLGDHRGLLNDTRLLVNVTEPPPLRLLVNDNTRLISNDNRLLTQDNRLIANVNVNDNRLLSDNTRHLSVLDGSRILTSDKYLAPYDPYQRGHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00911301; iTF_01106606; iTF_00459165; iTF_00387444; iTF_00736030; iTF_00792383; iTF_00056956; iTF_01047648;
90% Identity: -
80% Identity: -