Aaln049326.1
Basic Information
- Insect
- Agelastica alni
- Gene Symbol
- -
- Assembly
- GCA_950111635.2
- Location
- OX467718.1:17496197-17497877[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 3.5 7.5e+03 -1.3 0.1 17 27 52 62 47 66 0.83 2 7 4.7e-05 0.099 14.3 1.7 19 39 220 237 213 241 0.87 3 7 0.64 1.4e+03 1.1 1.1 18 39 247 265 244 269 0.76 4 7 0.074 1.6e+02 4.1 4.4 17 41 274 295 264 297 0.85 5 7 0.23 4.9e+02 2.5 0.4 18 29 303 314 297 328 0.79 6 7 7.1e-05 0.15 13.8 0.6 18 39 331 349 316 356 0.90 7 7 0.00016 0.33 12.6 0.8 17 34 358 375 351 382 0.81
Sequence Information
- Coding Sequence
- atgaatattaacattttgtttaaagATTTTCCAAAAATTTGTCGACTGTGTTTAACACATGGAGACCTTAAACCTTTATTGGaattaaaagaattagaaatatttaaaattttaactaacaTTAAGGTAAAAGAGGAAGATAAAATGCCAGAAAATGTGTGCCTAAAATGTGTCCATCAGTTGGAAAACATATCTAGTTTTGTAAAGAAATGTAAAGATAgcgaaaattgtttaaaaatggttGTAGAAAAAGAACTAGAACATCAATCTTCAAATGTAGAACAAGACGATGTAGGTAGTGATGGATATGATAATGGCGATGTAAAAAACGAAAGTAGTATGGATAATGATTTCTTcctgaaaaatgttaaaaaagagaTTGTAGAATTGGAAGAAGACATAGTTTTACAGATAAACAAAGAACTTTTAGCTTGTGAAAATTGTAGCGGGAGTTTTACATCTGTGGCTGCTTTAAATGAACATTACAAAGATTTTACTAATTGCCGtccaaaagaaacaaaaaaagacATTTGTAACAttgttgattatttaaaaaaaccaaaagggAAAAGGGGAAAAAAGAAAGTAAAGGAAGAAAGTGATGGTGAACCAGAGTATGTTAAAGGAAGAAAGTTAAAGGGAAAAAGaagatttttatgtaattacTGTGGCAAGAATTACACTAGAAAAAATGGATTAGAAAGGCATATTTTAAGTCATTCAGggaTTAAACCATTTGAATGTAAAGAATGTGGTAAAAGTTATATTACCAAGGATACACTTAAAACTCATTTACTAACACATACTGGGATTAAAGCTTACAAATGCACCGTCTGTCAGAAATCATTTACTCAGTCGAGTCATTTAAGCTATCACATGAGACGTCATGCAGGAGAGAAACCTCACACATGTACTTTTTGTGGAAAAGCCTTTTTGTCAAGTTATCATTTAGAGAGACATAAACTAATGCATACAGGAGTTAAACCATATGAATGCAATTTGTGTGGAAAACAATTTGTTCGCAGTACAACTCTCAGAGATCATCTTTTGATTCATAGTGGAGAGAAACCATTCCAATGCCAACACTGTGGAAAGCAATTTAATAGAAAACAATCCCTTACCAACCACGTTTTGGTTCATACAAATGGGAAAAACAGCAATAGTAGTTCAAATGTAAATGTGGTATCAAGtgataatagttttaaatatgtaaatattccCAACGAATTTCCTGTGAATCACTTATTAGCAGGCAATGTACCTCAATTTTCACCTAGTACACTTAATATTAAGCAACCAGGTGTAGAAACATTTTTGCATGATTCATCCAGTATAAAACAATCTGAAAGTTCGTTGAGTTTACATAGTACCACTTCTtga
- Protein Sequence
- MNINILFKDFPKICRLCLTHGDLKPLLELKELEIFKILTNIKVKEEDKMPENVCLKCVHQLENISSFVKKCKDSENCLKMVVEKELEHQSSNVEQDDVGSDGYDNGDVKNESSMDNDFFLKNVKKEIVELEEDIVLQINKELLACENCSGSFTSVAALNEHYKDFTNCRPKETKKDICNIVDYLKKPKGKRGKKKVKEESDGEPEYVKGRKLKGKRRFLCNYCGKNYTRKNGLERHILSHSGIKPFECKECGKSYITKDTLKTHLLTHTGIKAYKCTVCQKSFTQSSHLSYHMRRHAGEKPHTCTFCGKAFLSSYHLERHKLMHTGVKPYECNLCGKQFVRSTTLRDHLLIHSGEKPFQCQHCGKQFNRKQSLTNHVLVHTNGKNSNSSSNVNVVSSDNSFKYVNIPNEFPVNHLLAGNVPQFSPSTLNIKQPGVETFLHDSSSIKQSESSLSLHSTTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00026315;
- 90% Identity
- iTF_00026315;
- 80% Identity
- iTF_00026315;