Aaln002403.1
Basic Information
- Insect
- Agelastica alni
- Gene Symbol
- Mblk-1
- Assembly
- GCA_950111635.2
- Location
- OX467708.1:24420295-24429064[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 2.1e-14 54.6 0.0 1 45 11 56 11 56 0.95 2 2 2e-18 3.6e-15 57.0 0.0 1 43 354 397 354 399 0.95
Sequence Information
- Coding Sequence
- ATGTCCGCAGTAGCAGGCAGACGAACTTACACAGAAGATGAGCTCCAAGCAGCTCTAAGAGATATCCAATCTGGGAAATTGGGCACGCGACGAGCTGCGGTCATTTATGGCATTCCCAGATCAACTCTTCGCAACAAAGTGTACAAGTTGGCTTTGGAAAAGGAAAGAGAATCGCATCTTAATAGTTCAACGCCAATAGAGGAAGAAGCTATGGAAGATGAAAAAGATTTGTCCGGTTCGGAAGAGGAAAAAGCAGTCGAGAAAGCTTTAGAAGCTCCCTTGCTCTCTATGGAAGATTTGTTCAGGTTTAGCTCGGGTAGAGAGATTCCAGACACTCTTAAGGCCATCCTGCAAAAGGGTGGTTTGGACCAAAGCGAAGTTCCCTACCTCCAAAATTTCCTCATCGCGTCCCAGACGATGCTCCCGACTCAGAAACCTCCTGATGGTTCAGTGGTCTCCAGCATGATACCGGAACTCATGAAGCGCATGATTGCCGAagaacaattgctgaaaatgcAGAACAACGGTGACAGCGAAAAGATCAACACCAGGCAGAATCCCAGTAACTCCGTGATAACCAAAGGTGAGCGAATCAAGTCCGAGTCCGATATGGAAACTGACGACTCTCCATCGAATGTGATACTTAAAATTCCGTCCTTCAAGCCGACGACGTCGAGTAAAAATGGATGCGATACTATTAGAAATCAAGTTGAACCTACAGttgGTAGTATAATATCACCTCCCGTAACAAGTGAATCAGGGTCTCCTCCAATTTTACCAACCAAAGGACTCATTCTAAAAGACGTCAAGGATGTTATAGCTCAAAGCATTAGTCAAAAATTCCAGACCATGGAGCCGCGAAGGCCAATCATAGATATTGAATTTAAGAGAGGAGGATTCACGCCTCCTTTGGGATCGGGAATTTCTGTTATTAAGACACAACACGACCTCAGTCGACAATTTCAACATCAACAACCTCCCAAATCTCAGCAAAGTTCTAACAGCGCTCCCACGGGAGGAAAAGGTACACGTCCTAAACGAGGCAAGTACCGCAACTACGATCGAGATAGTCTAGTAGAAGCGGTACGAGCTGTCCAAAGAGGTGAAATGTCAGTACACCGAGCAGGTAGTTATTACGGAGTGCCTCATTCCACACTCGAATACAAAGTAAAAGAGAGACATTTAATGCGACCTCGCAAACGTGATCCTAAGCCAAATCCAGTAGATGAAAAAATCGCCAGTCTTAAACAGAACGACATCCGTAATTCACAAGACAAGATGAAACCGATGATGAAACCACCACAAAAGTTTTCTCCTACGTCACCTAATGGGATGAAACTACCTTTATTCGAACCTGGAATGACTCCCTTACCGGGTTACAACGCTCCACCTTTTCCTTTTTGGGCTCCACCAGGTTTCCCTCCAATTCCTTTGGACTATGGTAGAGCTCCAACGTCGCCATTTCCTGGACCAAATCCTTCTGAATTCTTCGCGTCTCAAATGATGCAGAAGCTTCAAGAAGACTCGTCCAGAACAACCTCACAACCTTCCGGAAGCGGTCCCACTCTATCTAAAAACGCAAGACAAAGAGCGGAATCGTTGTTAGAAGGTACAGCGGCAAACGGTTCTTTTCTTGATGGGATTATCAGGTCGAGTCTCGAATCTGGTGTCCCCGGTAGTGAAGAAAAATCACAGAATGAAGATAAAAACGTAGCACCCGAGAACATGTCCAATAAAGCGCTGTTAGATCAGTTATGTAGAAATAGCAGACTTACTCCTTTATCTAAACCGACGACTTCGGACGGGAATCATAGTTCCGGAGACGAATCTTGTCGAAAGAGTATGAGTCCTTTAAATTTTGCAACAGGGGAAATTTCCCGAGATGACAACAATGATGACGATTCATCATCCCGATTTGACAAAGACAGTTcggaagttcatacgattgaaCTTTCAAACGATTCTAACACCTCTAGCGAGAAAAAAGCAAACGAGGAGGAACGAAATCGACCGAGAATTTATTTGAAACAAGATCTGGTTAAACCTGAAAATCTGAAACCAGAAATGTTGGTGCGCTTTCGTGGAGAGGTCCTTCCAGATTTGGACCATAATGGAATGGTGGAAAGTGCACCCAGTAGTGCCTCAGAAACCGATGGGCCGCAAGACTGA
- Protein Sequence
- MSAVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALEKERESHLNSSTPIEEEAMEDEKDLSGSEEEKAVEKALEAPLLSMEDLFRFSSGREIPDTLKAILQKGGLDQSEVPYLQNFLIASQTMLPTQKPPDGSVVSSMIPELMKRMIAEEQLLKMQNNGDSEKINTRQNPSNSVITKGERIKSESDMETDDSPSNVILKIPSFKPTTSSKNGCDTIRNQVEPTVGSIISPPVTSESGSPPILPTKGLILKDVKDVIAQSISQKFQTMEPRRPIIDIEFKRGGFTPPLGSGISVIKTQHDLSRQFQHQQPPKSQQSSNSAPTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDIRNSQDKMKPMMKPPQKFSPTSPNGMKLPLFEPGMTPLPGYNAPPFPFWAPPGFPPIPLDYGRAPTSPFPGPNPSEFFASQMMQKLQEDSSRTTSQPSGSGPTLSKNARQRAESLLEGTAANGSFLDGIIRSSLESGVPGSEEKSQNEDKNVAPENMSNKALLDQLCRNSRLTPLSKPTTSDGNHSSGDESCRKSMSPLNFATGEISRDDNNDDDSSSRFDKDSSEVHTIELSNDSNTSSEKKANEEERNRPRIYLKQDLVKPENLKPEMLVRFRGEVLPDLDHNGMVESAPSSASETDGPQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00436386;
- 90% Identity
- iTF_00436385; iTF_00436386;
- 80% Identity
- -