Aaln022196.1
Basic Information
- Insect
- Agelastica alni
- Gene Symbol
- kn
- Assembly
- GCA_950111635.2
- Location
- OX467711.1:15427259-15453646[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-87 1.7e-82 279.3 0.0 208 341 40 184 28 194 0.95 2 2 0.0032 95 2.8 0.0 544 562 196 214 186 223 0.82
Sequence Information
- Coding Sequence
- ATGTCTACGAAAATACTAATGGGAACAACAGAAATAAAGGTGCTGAGAACTATAAGGGGAATTTCACTCAGAGAAAGAACAAGAAATAAAGACACACTGAGAGAAACGGGAGTTCAAGTTGTGGTAGTGATATCCACGCAAGTAGCTGTAGATGGTCCTCTCTTAGCCATATCGGATAACATGTTTGTACATAATAATTCGAAACATGGTAGAAGAGCAAAGAGGCTGGACCCCACGGAAGGCCAATTTCCAGGACTGTACCCGCCTCTGCCGGTGGCTACCCCTTGTATAAAGGCCATCAGCCCTAGCGAAGGATGGACGGCAGGAGGATCGACGGTTATTATAGTGGGAGATAACTTCTTTGATGGACTACAAGTCGTTTTTGGCACTATGCTCGTTTGGAGCGAGttaATAACACCCCATGCGATACGAGTCCAAACACCTCCACGACATATACCGGGCGTTGTAGAAGTAACGTTATCGTATAAGTCGAAACAATTTTGTAAAGGAGCACCAGGACGATTTGTATATGTTTtttcttcgGAAGCAACTAATTATCATTACTACGCCAAACACGAATCTCCCGAAAAAGAGAAAAGCGCTTTTGCACCTGTATTTAGAGGGGGTGAAACACCCCCAATACCCGCTCCTGCATTATTTCACCACCAACCCGTTTCAGGTTGGCATCATTTGGCTGTACAGTGTTAG
- Protein Sequence
- MSTKILMGTTEIKVLRTIRGISLRERTRNKDTLRETGVQVVVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGQFPGLYPPLPVATPCIKAISPSEGWTAGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVFSSEATNYHYYAKHESPEKEKSAFAPVFRGGETPPIPAPALFHHQPVSGWHHLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -