Basic Information

Insect: Agara michaeli
Gene Symbol: RREB1
Assembly: GCA_018245675.1
Location: DWDX01008737.1:1-7064[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.021 1.7 9.9 0.1 1 23 288 310 288 310 0.97

2 10 0.0012 0.093 13.9 0.4 1 23 319 341 319 341 0.99

3 10 0.00071 0.057 14.5 2.0 1 23 347 370 347 370 0.97

4 10 0.0029 0.23 12.6 1.6 1 23 730 753 730 753 0.96

5 10 0.00024 0.019 16.0 1.3 2 23 946 967 945 967 0.97

6 10 0.025 2 9.7 5.3 1 23 973 996 973 996 0.97

7 10 0.14 11 7.3 1.4 1 23 1029 1053 1029 1053 0.90

8 10 0.61 49 5.3 0.6 1 23 1078 1101 1078 1101 0.88

9 10 0.022 1.8 9.8 0.3 2 23 1141 1162 1140 1162 0.92

10 10 0.027 2.2 9.5 5.3 1 23 1168 1190 1168 1190 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.021	1.7	9.9	0.1	1	23	288	310	288	310	0.97
2	10	0.0012	0.093	13.9	0.4	1	23	319	341	319	341	0.99
3	10	0.00071	0.057	14.5	2.0	1	23	347	370	347	370	0.97
4	10	0.0029	0.23	12.6	1.6	1	23	730	753	730	753	0.96
5	10	0.00024	0.019	16.0	1.3	2	23	946	967	945	967	0.97
6	10	0.025	2	9.7	5.3	1	23	973	996	973	996	0.97
7	10	0.14	11	7.3	1.4	1	23	1029	1053	1029	1053	0.90
8	10	0.61	49	5.3	0.6	1	23	1078	1101	1078	1101	0.88
9	10	0.022	1.8	9.8	0.3	2	23	1141	1162	1140	1162	0.92
10	10	0.027	2.2	9.5	5.3	1	23	1168	1190	1168	1190	0.97

Sequence Information

Coding Sequence: ATCAAAACAGAAGTCATCAGCGAGGCTAAAGTCGAGGCCGAGAACCATCGGGAGCGCGGCAAAATGCGGATCAAACACGAGTCGCGGGCCGCGCGCACCACCAGCATCGATAGCGACAACAGATCGGACCGGAGCGAAGACGGAGATACACGTAGAGCGCGCAAGAGAGCAGCGTCCACTTCCCCTTCACCCATACACCTAGATAAGAGGGTCGCTCGTTTCGAGTTCCCAAAGAGCAGGCAACGCTACGATTCGGTGAACACTTTCAACGCTCACCGATACAGCGCACACGGTGAAGACGCCAGAGCCGGCTACGACGATCTCACCTATGTCGACTACACCAGCAAAAAGTTTCCCGAAATCGCTCGAGGACTCCGCGAACGCAGCCCTCACATTTCCATCGCGGAACAGCGTTACCGATGCGATTCATGCTTACGCGATTTCCCATCCGGACAGGCGTTCGACATCCACAAAAAGACGTGCAGTGCTTCTACGAGACTATCGAGCCCTGAACGAGATCGCAGGGAGGACTTTTTTGCGAAATTGGATTTAAGAAACCGGAGTTTTGCAATTCCAGGCACGTTGACGCCGCCGATGGAGCGATTTACGCCGAAATTCGACGACGGCCATCTGACAACAAACGGTATCAAACATATCGACGCTGCCAGAGACTTGGCAGACATTCAATCGATTCTAAATGTCACCTCTGCGGGCAGTCTGTTGGAAAGATTAACGGGAACCCGAGTTGCTTTGGAAAGCTCAGTACTCACACCGCCTGATACGATAGTGAAAGAACGTGAACAGGAAGAAACTCAAGATAATTTCGCAGCAGAATTTAGACGGATGAAGTTGCGTGGTGAATTTCCTTGCCGTTTGTGTCCAGCTAAATTCCCAAATTTGCGAGCTTTGAAAGGGCACAATAGAGTGCATCTCAGTGGAACCGGCCCTGGCCCATACCAGTGCAACATGTGTCCACATGCCTCTTTAGATAAAGCTGCTCTAGTGCGTCATATGCGAACTCATAATGGGGACAGGCCGTATGAATGTGCCGTTTGTAATTATGCATTTACAACAAAGGCAAATTGTGAACGGCATTTGCGTAATAGACACGCCAAAGTTACAAGGGAAGATGTCAAACGCTCGATCATATATCACCCATCAGAAGACCCTAATAATGATGAGGTAAATTCTAAACTGGCTCGTGAAGAAGTAAAAAGATCTCTGGCCTTCCACACCCCTGAAACTGAAAGACGCAGTGAAAGTACTGGCAGAGACACCCCACTTACCCATTACACTCCCACTTTTGTTACTGATAAACATCCAGTTACAGCTCTGTCTTCGAAACCTATAAATACATTGActgaaatatcaaatgtaactcctaaagaatataataaagagcCACTCGAGCAACCTCTGCCAAGAATAAAAGTTAAAGGCATTGGCCAATTGACACAAATACCAGAGTTCAGAGCGTCGGAAATTTCTTTCAAAGCTAACGAAATTCATACACCTGAAAACTATGACGAGGAAGCGCCTGTTGATCTCAGCACGAATGATAACAGCAACTGCGATGTTCTCGATTTAAGCAAAAAGAAACGCGATGTAGatgaaacagaaataaaaatccCACCGAGATCAGATTTTGAACAAAATGCAGCATCTGCCGCCGCGTCAGCCTTTGAGAAAACCAGATTCTTATTGGCCCAACAAAGGCTTTTCGAAACCTCCCTCCCTAAAATCGATCCTGCTTACTACGCATCTCAGCTCACTCAACTTTACGCCGGTGCCGTACCAGGCCTGCCTGGCTTGCCATTACCGCCATCCTTTCCTATCAACCCTTATTTTCTTCCGACTTCTTTTTTTCCACACCCAACTGACTCACAAGAAGTGGCCGAAATAAAACAGCGTATTCAAAGAGAAATTATCAGGGGATTGAATATGTCTGGTGGAAGACTTGTCACAAATGAACAACAAGAGATACAACCCAAACAGGAACCAGAAGAAGAGGAGCAAAAGCCGTTGCCGCAAACCATCGATACTTCTTCAACGCCGCCTCCACTTCCTGAATCTCCACGACCACACAGCAACAATCTTGCACCTCAAAGCGACTCTGTAAAAATGGTTATTAAGAACGGTGTGCTCATGCCTAAGCAAAAGCAAAGGCGCTACCGAACTGAACGCCCCTTCTCTTGCTCCCAATGCTCAGCACGCTTTACTTTACGTTCTAACATGGAACGCCATGTAAAGCAACAGCATCCTCAGCACTGGAGTGTACGAAGACCTGGGCCCAGAGCCCCTCCGCCTTATCCCACCACTGATGCTCTTACGGATCGTGTTAAGTATGCTCTCTTAGCTCGTCACCTGGAACGTCCTATACAGCCAAATGATAGTTCTCCAATAAGGAGGGACTCAGACGAAGTGGCAGACAATGAAGAGGATGAAGATGATGCTCTGGTAATAGATGAGGAACCGGAAGACCGAAAGCCTGATGAACATAGTGCCGCCCACCGAGCTGCAGCGGAAATATTGATGGCTTCCCAGCAACAAGAGATGACAAAAGATTTTGATTTAAAGATTGCAgggaatttaattaacaagcCCATACCCATCAATACCGATAAAACTGAAACAGGAACCGATTCTAATCCTGCAGCAGAAACTCTACCGGTCCCAGTTGTACCTACACGGAGTGACGAGGAAGAAGATGAGGAGGGACTGGTGGCTTCGACCAGCGAAGGCAACAACTCTGGAAGTGACGAAAATAAATCGGAGTCCGATACGAACCAGCCGCCAAAGAAGAAATCCGCTTACAGTTTGGCACCAAACCGGGTGTCCTGTCCCTATTGCCACAGAAAATTCCCGTGGTCCTCGTCCCTCCGTCGCCATGTCCTCACCCATACCGGGCAGAAACCCTTCAAATGTCCGCACTGTCCGCTTCTCTTCACAACCAAGTCCAACTGCGATCGCCACTTGCTGAGAAAACATGGCGGTTCTGCTAGAGCCATACTAGCCGAACCCATTCCAGAGGCTGTGCCGCAACCGCAACCAGCGAACGATGTGAGGACAGTACCAGAGAGACCTTTCAAGTGTGCTTCGTGTCCGACAAGCACTTTTTCATCGATGGACACCTTGAAGAAGCACATGTCCTCCCGCCACGGAACGGGAGATTCCCAACCAACCTCGCCCAATCCCGACGGGAACGATGACACTGTAGATGGCAGCTTGGTATTCAAATGCCATCTCTGCGAATCATCTTTCAATGAAAGAAGTGGGGCTTTGGGTCATCTGGCGTCGAGCCACTCCGCGGAGTACGAGCAGCTGGTCAGCAAAGGTGCCCTGGACGCGGCCAGCGATAGGAGCGAGAGCGCAGATGACGATGAACGGGGGAAATTTCCGGATCACGCTAATAGGAAGGTTGTCTGCGCGTTCTGCATCCGTCGCTTCTGGTCCGCTGAGGACTTGCGCCGCCACATGAGGACACATTCCGGCGAGCGGCCCTTCGCGTGCGACCTCTGCCGCCGCCGGTTCACCCTCAAGCACAGCATGCTGCGACACCGCAAGAAGCATCGCGAGGAGGTCACCGACGACGAGGAAGCATCGCCCCCCGACACTCCCGAGAACGCCGTGACCAATGGATATCGTTACCAAGACGACGACGGGTCCGGCACCGAGATACCGAACAACgtgaacaacaacaactcgCCGCCCTCCGCGCCCTACGACAAGAAGCTGAAGCTCGAGATGACGTCGCGCAAGTACTCCTCGGAGGCGGATAACGACACGGAGAACGGCGGCGACCTGATCGGGAAGCTCCTCGGCATCCCCGACAAGACGATCATCAACAAGCTGCTCTCGTCGGCGGACGAGGCGGCCAAATTCCTCGGAGTGAACAAATGA
Protein Sequence: IKTEVISEAKVEAENHRERGKMRIKHESRAARTTSIDSDNRSDRSEDGDTRRARKRAASTSPSPIHLDKRVARFEFPKSRQRYDSVNTFNAHRYSAHGEDARAGYDDLTYVDYTSKKFPEIARGLRERSPHISIAEQRYRCDSCLRDFPSGQAFDIHKKTCSASTRLSSPERDRREDFFAKLDLRNRSFAIPGTLTPPMERFTPKFDDGHLTTNGIKHIDAARDLADIQSILNVTSAGSLLERLTGTRVALESSVLTPPDTIVKEREQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLAREEVKRSLAFHTPETERRSESTGRDTPLTHYTPTFVTDKHPVTALSSKPINTLTEISNVTPKEYNKEPLEQPLPRIKVKGIGQLTQIPEFRASEISFKANEIHTPENYDEEAPVDLSTNDNSNCDVLDLSKKKRDVDETEIKIPPRSDFEQNAASAAASAFEKTRFLLAQQRLFETSLPKIDPAYYASQLTQLYAGAVPGLPGLPLPPSFPINPYFLPTSFFPHPTDSQEVAEIKQRIQREIIRGLNMSGGRLVTNEQQEIQPKQEPEEEEQKPLPQTIDTSSTPPPLPESPRPHSNNLAPQSDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPGPRAPPPYPTTDALTDRVKYALLARHLERPIQPNDSSPIRRDSDEVADNEEDEDDALVIDEEPEDRKPDEHSAAHRAAAEILMASQQQEMTKDFDLKIAGNLINKPIPINTDKTETGTDSNPAAETLPVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTNQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPIPEAVPQPQPANDVRTVPERPFKCASCPTSTFSSMDTLKKHMSSRHGTGDSQPTSPNPDGNDDTVDGSLVFKCHLCESSFNERSGALGHLASSHSAEYEQLVSKGALDAASDRSESADDDERGKFPDHANRKVVCAFCIRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREEVTDDEEASPPDTPENAVTNGYRYQDDDGSGTEIPNNVNNNNSPPSAPYDKKLKLEMTSRKYSSEADNDTENGGDLIGKLLGIPDKTIINKLLSSADEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: -
80% Identity: -