Basic Information

Insect: Agara michaeli
Gene Symbol: -
Assembly: GCA_018245675.1
Location: DWDX01003994.1:108-4564[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 7.9e-06 0.00064 20.7 5.5 1 23 195 217 195 217 0.98

2 9 0.00021 0.017 16.2 0.4 2 20 250 268 249 270 0.93

3 9 0.041 3.3 9.0 0.6 3 23 295 316 293 316 0.96

4 9 4.6 3.7e+02 2.5 0.6 3 19 342 358 340 360 0.80

5 9 0.0032 0.26 12.4 0.2 1 23 371 393 371 393 0.97

6 9 0.00022 0.018 16.1 1.7 2 23 471 492 470 492 0.95

7 9 0.00017 0.013 16.5 2.3 2 23 535 557 535 557 0.97

8 9 3.7e-05 0.0029 18.6 1.7 1 23 607 630 607 630 0.98

9 9 0.0014 0.11 13.6 0.2 1 23 686 708 686 708 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	7.9e-06	0.00064	20.7	5.5	1	23	195	217	195	217	0.98
2	9	0.00021	0.017	16.2	0.4	2	20	250	268	249	270	0.93
3	9	0.041	3.3	9.0	0.6	3	23	295	316	293	316	0.96
4	9	4.6	3.7e+02	2.5	0.6	3	19	342	358	340	360	0.80
5	9	0.0032	0.26	12.4	0.2	1	23	371	393	371	393	0.97
6	9	0.00022	0.018	16.1	1.7	2	23	471	492	470	492	0.95
7	9	0.00017	0.013	16.5	2.3	2	23	535	557	535	557	0.97
8	9	3.7e-05	0.0029	18.6	1.7	1	23	607	630	607	630	0.98
9	9	0.0014	0.11	13.6	0.2	1	23	686	708	686	708	0.97

Sequence Information

Coding Sequence: ATGGCACTCAAGCTGGGAAAATGTAGACTTTGTCTTAAGCTTGGAGACTTTTATTCCATCTTCACGATGGACAACAACTTACAGCTCGCTGAAATGGTTATGGAATGCACCAGGGTAAAAGTCTATGAAGGTGATGGTCTACCGGATAAAATCTGTGCAGAATGCATTCAAAAACTCAGCAGTGCGCATATTTTCAAACAGCAGTGCGAAAGATCGGATGAAGAACTCCGACGAAATTATGTTCCTCCTCCAGGATTTAGCATTGCTCCACAAGCACAGAATAGACAAAGCAGCGACTCagcattttcaaataatacagatacatcCAACAAGCCCTTATCATCGTTTGAAACAAAAGCTACACCGATTAGTCGTAATCGTAAAAGAAGCCGCGAGAGCTTAGACAATGCTTCCACAAGTAGTCAGTCCCACGACAACATACCCCCAGGCACCACCAAACGTATTCAGGAACTCAGGAAAACACAAAAGCGAACAAAAACCCATTACTATACAGATTCCGATTATGAATATAACAGCCCGTCGCACTTCTCTGCCGAAACGGACTCTGACGACTTTCTAGACCACAAATGCAAAGAGTGTCATAAACGTTTCGATAGCAGCAGAGGCTTGATAAATCATATGAGAATGCACACAGCGGAAAAGAAGGCGAAACAGGAACAATTACGGGAGACCGAAATTGTCGCGTCGAACGATTTGAAAGATGCGACGGACGATGACGACAAACTGAACTGCGACAAATGCGGGAAGACTTTCAAATTGAAGATAATGCTGAAACGGCATTACGATATATGCTTGCCGCCCATGAAAGAGCTCAAGGTGGCTCTGGAGCCGATTGACGGGAAACGATCACCGAAGCTCGATTGTGAAATATGCAACgcgaaatttaaatgtgttgAAAATTTGGACAAGCACTTAAGAGTAGTGCACGCAATCGGGAGCAAGAAGGAGAACGTCACGACTGCACAGGGAACCCGACCAGAGAACGGGAAAGTTACGTTGCCTtgcatttattgtaaaaaaccATTCACCGATTACTATTCTCATAACGCCCACTTCAATGCATGTCTCAAGGGGAAGTACATCGGCAGTTTCGAGTGTCCGCTTTGTCAAAAAGTTGTGATCAAAAAAGCATCTTATTATCTCCATATTAAAGGGCATTATATGCAAACAACACCAACAACGTCGGCGTCATCTGAAACTCCAAAACGTTATAACTGTCGAATAGGTAAGAAAAAATTGCCCTCTGAGGAACAACTGCTGATGCATCTCTCAAACCACATTCCTCAAGTGGAAGATCCTGATGACGAGGGATCCAGAGCGAGCACTCTTGATGATTCGGTATCAGTGCTATCGGAATACAGTAATACCAAAGTATCAAGTGGaccattaaaatgtacaatttgcgataaaaaatttacatacaaaaaagcTTTGGACTCGCATTTCGCTAAACATTCACAAAATGAGGTCAAAATTAAAACGGAATCACCAGACAAGATCAAAGATGAATCAATGGATTTATTGTCTGAAGTGGCCCAACAATCAGAATCTGAGTCTAGTCAAGACGAAGAAGACGATAACACATGTGATATTTGTGAGAAACAGTTCTCATACAAGAGGCTGTTGTTGCAACATAAGCGGACCAAGCATCCCATGACGGCCGGGACGAAGCGAGCGAAAGTCAACCTCAAGGACTGCGCGGTCCGCTGTCTGATCTGCGATATCGAGATGAAAGTGAGCGCGATCAACGAGCACAACCAAACGCACATATCGATGAACATAAAGCCCAGGAACCTCTACACTTGCATGGAATGCGAGGAGAAGTTCAAGAGTTGCAGCTCATTAGCCAATCATATAAAGATGGTGCACCGGCTCAAGCAACAGACGCCGAGGCAGGATATGTCCGCACCGGATCTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACGCGCTCCAGAGTCACAACGGCTTTGGTGAGGTCTCCGCCGCGGACAATAAGCCGCTCGTCAATCTGAGCGGTTTCACGTGTCCCATTTGTAATAAGCAGATGCCTACATTGATTTCACTCAAGAGACACGTCAATTGGCATACAAATGTGGGCAAGGTCATTGAGAAAAAGTACGAGTGTTTTGTCTGTCAAGAGGTGAGagtacaatttgaaataaccTTTTTTCAGGAAACATCTCATGTTGCATCTAGAAATGTTGTCATACTTcttttatttccatataaacgtaacatcacgcctgtaatcccctaa
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECTRVKVYEGDGLPDKICAECIQKLSSAHIFKQQCERSDEELRRNYVPPPGFSIAPQAQNRQSSDSAFSNNTDTSNKPLSSFETKATPISRNRKRSRESLDNASTSSQSHDNIPPGTTKRIQELRKTQKRTKTHYYTDSDYEYNSPSHFSAETDSDDFLDHKCKECHKRFDSSRGLINHMRMHTAEKKAKQEQLRETEIVASNDLKDATDDDDKLNCDKCGKTFKLKIMLKRHYDICLPPMKELKVALEPIDGKRSPKLDCEICNAKFKCVENLDKHLRVVHAIGSKKENVTTAQGTRPENGKVTLPCIYCKKPFTDYYSHNAHFNACLKGKYIGSFECPLCQKVVIKKASYYLHIKGHYMQTTPTTSASSETPKRYNCRIGKKKLPSEEQLLMHLSNHIPQVEDPDDEGSRASTLDDSVSVLSEYSNTKVSSGPLKCTICDKKFTYKKALDSHFAKHSQNEVKIKTESPDKIKDESMDLLSEVAQQSESESSQDEEDDNTCDICEKQFSYKRLLLQHKRTKHPMTAGTKRAKVNLKDCAVRCLICDIEMKVSAINEHNQTHISMNIKPRNLYTCMECEEKFKSCSSLANHIKMVHRLKQQTPRQDMSAPDLADFCEVVVTKAEPLDALQSHNGFGEVSAADNKPLVNLSGFTCPICNKQMPTLISLKRHVNWHTNVGKVIEKKYECFVCQEVRVQFEITFFQETSHVASRNVVILLLFPYKRNITPVIP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -