Basic Information

Insect: Agara michaeli
Gene Symbol: -
Assembly: GCA_018245675.1
Location: DWDX01002262.1:4895-7829[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 5.4e-06 0.00043 21.2 1.5 1 23 175 197 175 197 0.97

2 11 9.1e-05 0.0073 17.3 1.0 1 23 203 226 203 226 0.97

3 11 0.51 41 5.5 2.9 1 23 233 255 233 255 0.98

4 11 0.029 2.3 9.5 2.4 1 23 262 284 262 284 0.97

5 11 0.23 19 6.6 2.8 1 23 290 312 290 312 0.95

6 11 0.0015 0.12 13.5 4.1 1 23 318 341 318 341 0.96

7 11 0.018 1.4 10.1 1.4 2 23 347 366 346 366 0.96

8 11 2.5e-07 2e-05 25.4 1.4 1 23 372 394 372 394 0.97

9 11 3.6e-06 0.00029 21.7 1.2 1 23 400 422 400 422 0.98

10 11 3.5e-05 0.0028 18.6 0.3 1 23 428 451 428 451 0.97

11 11 0.019 1.5 10.0 0.5 1 20 457 476 457 478 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	5.4e-06	0.00043	21.2	1.5	1	23	175	197	175	197	0.97
2	11	9.1e-05	0.0073	17.3	1.0	1	23	203	226	203	226	0.97
3	11	0.51	41	5.5	2.9	1	23	233	255	233	255	0.98
4	11	0.029	2.3	9.5	2.4	1	23	262	284	262	284	0.97
5	11	0.23	19	6.6	2.8	1	23	290	312	290	312	0.95
6	11	0.0015	0.12	13.5	4.1	1	23	318	341	318	341	0.96
7	11	0.018	1.4	10.1	1.4	2	23	347	366	346	366	0.96
8	11	2.5e-07	2e-05	25.4	1.4	1	23	372	394	372	394	0.97
9	11	3.6e-06	0.00029	21.7	1.2	1	23	400	422	400	422	0.98
10	11	3.5e-05	0.0028	18.6	0.3	1	23	428	451	428	451	0.97
11	11	0.019	1.5	10.0	0.5	1	20	457	476	457	478	0.93

Sequence Information

Coding Sequence: atggctaatataaaaaatagagtAAGAACACCGACAAAAACATCAACAAGAAATAAAGGGTgtggtaaaattaaaaaaacctcGACAGGTGTAAGGGAATCGTCCAAACCACACATTGTAATGAAAAGACCCAGTGTCGGAAAGTGTTTGACATCAGaagaaaaagttaaatatctCTTGCAAAATGGTCACAAGCTGAAGGCTAAGATAGTTGATAAAATAGCAATTAAAAAGAGAGGTGTTAAGAATTGTTTACGGAACAACAAAGAGCAGTTTAAGTTATATAGCAATATATTGCAAGGTGAACTAATGATAGATGATTATAATGCAAAAAGAAAAGTTTTGCAAATAAAGAGAGCGGCCGAGAAAGgtcttaacaataataatgtaactgtGAACGATCAAAACCAACTGCCAACCACGAGCAATGCGACGGGCTCGGCAACCGGTAGAAAGAAAAAGGGGCGAGGCAATAGGAAAGTTGTTCAAGCGAAACGTGTAACGGTTGTAACTGCGCCGACGTATCAGTGcgattattgtaaaaaaaaattcacccTCAAGGCATCACTGCGAAGACATGTGCTCGCTCACCTTGACTATAAATTGTATAGCTGCACCCGTTGCCCCAGAAAGTTTGAAAGTAAAGCGAACTTGTTGATACACGAAAAGAAATCTCACCCCAACACAAAAGAGCATTATATGTGTACTTTGTGCTGTAGGGCCTTTTTGTCTAAGAGAAATATGATACTACACATGTCCACACACGGATCAAAGGAGAATGAATTCAAATGTATATACTGTGATGAGGATTTTCATCAGCAAATTCTGTTGAATCAACACGAGAAGAAGCATTTAGTCGGGGGTAGGTTCCTTTGTACCGTGTGCAACACTAGCTATGATTGTAGAAATCAGTTGTCCTTGCATATTAAAAGCCATCTGAAGATTAAAGATTTCGTTTGTCAGCATTGTGGCAAAGATTTTTTGAGGTTGAACTCATTGAAGCGACATGTTCAGATATGTCACGGCGGACATCGCATTCAGTGCCCAATCTGCAAGAAATACTTGAAAGGGCATTTGACAGAGCACATGCGAGTCCATGAGAAGCAACGGCCACATATATGTCCCGAATGTGGTCAGAGCTTTACCCAGTCTACTCAGTTGAATGTCCACCGTCGTTCGCATACCGGAGCTAGGCCTTATCCCTGTCGTATCTGCAATAGGGCATTTACACATTCTAATGCGTTGATGTTGCACATTAGAAGGCATACAGGGGAAAAACCGTTCCAGTGTGCGATGTGTCCCCTTGCCTTCTCTCAACTGCCTCATATGAAGGCTCATATGCGTAACATTCACAAGAAGGAGGAGTGTTACAAGTGTAAGAAGTGTGATGCGTTCTTCAAGTTGAAGGTTCAAATAGAAAATCACGAAAAGGCCTGCACCGTTGGCGACAAGCAGCTCACGTTCGAGGAGCAGATCCAGGCATCGGTGCAGCCCGAGGAGATCGAAGTTGAAACGGTTATGACCCTGTCCCGTATGAGGTTCCTGCTAGCTCTGCTGCTTACCATGATCGCTACCAAAGAAAGGCTCCGATACTTGGGTTTCAACAAACGCCTCGTTGACGACCTTCTAGTGGAGTCTCTGGAGGCAATGGGACACCATCCATGCAAGGATGACAAGTTGCTACCCTTAAATCGTCTCCGTGGCAACATACAGATATTACTCAATGGTACTGTACCAAAGGAACAGATGGAGAAATTCAAAAAGGAGAATAAGTCCACTGAAGAATTGCTGGAACTTCTCACAAATGAAAAGAAATCCAGTtaa
Protein Sequence: MANIKNRVRTPTKTSTRNKGCGKIKKTSTGVRESSKPHIVMKRPSVGKCLTSEEKVKYLLQNGHKLKAKIVDKIAIKKRGVKNCLRNNKEQFKLYSNILQGELMIDDYNAKRKVLQIKRAAEKGLNNNNVTVNDQNQLPTTSNATGSATGRKKKGRGNRKVVQAKRVTVVTAPTYQCDYCKKKFTLKASLRRHVLAHLDYKLYSCTRCPRKFESKANLLIHEKKSHPNTKEHYMCTLCCRAFLSKRNMILHMSTHGSKENEFKCIYCDEDFHQQILLNQHEKKHLVGGRFLCTVCNTSYDCRNQLSLHIKSHLKIKDFVCQHCGKDFLRLNSLKRHVQICHGGHRIQCPICKKYLKGHLTEHMRVHEKQRPHICPECGQSFTQSTQLNVHRRSHTGARPYPCRICNRAFTHSNALMLHIRRHTGEKPFQCAMCPLAFSQLPHMKAHMRNIHKKEECYKCKKCDAFFKLKVQIENHEKACTVGDKQLTFEEQIQASVQPEEIEVETVMTLSRMRFLLALLLTMIATKERLRYLGFNKRLVDDLLVESLEAMGHHPCKDDKLLPLNRLRGNIQILLNGTVPKEQMEKFKKENKSTEELLELLTNEKKSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00167105;
90% Identity: -
80% Identity: -