Basic Information

Insect: Agara michaeli
Gene Symbol: -
Assembly: GCA_018245675.1
Location: DWDX01012152.1:1892-4150[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00028 0.023 15.8 1.9 1 23 93 116 93 116 0.94

2 12 0.00012 0.0092 17.0 2.3 3 23 241 262 240 262 0.96

3 12 0.049 3.9 8.7 4.5 1 23 270 292 270 292 0.98

4 12 0.0014 0.12 13.5 1.8 1 23 300 323 300 323 0.93

5 12 2.6e-06 0.00021 22.2 0.2 1 23 329 351 329 351 0.98

6 12 1.1e-05 0.00085 20.3 3.0 1 23 357 379 357 379 0.98

7 12 1.7e-06 0.00014 22.8 1.8 3 23 387 407 385 407 0.96

8 12 9.6e-06 0.00077 20.4 0.4 1 23 413 435 413 435 0.99

9 12 2.3e-08 1.9e-06 28.6 0.4 1 23 441 463 441 463 0.98

10 12 0.00021 0.017 16.2 0.5 3 23 471 491 469 491 0.98

11 12 0.00011 0.009 17.0 3.4 1 21 497 517 497 519 0.96

12 12 5.6e-06 0.00045 21.1 0.1 1 23 525 547 525 547 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00028	0.023	15.8	1.9	1	23	93	116	93	116	0.94
2	12	0.00012	0.0092	17.0	2.3	3	23	241	262	240	262	0.96
3	12	0.049	3.9	8.7	4.5	1	23	270	292	270	292	0.98
4	12	0.0014	0.12	13.5	1.8	1	23	300	323	300	323	0.93
5	12	2.6e-06	0.00021	22.2	0.2	1	23	329	351	329	351	0.98
6	12	1.1e-05	0.00085	20.3	3.0	1	23	357	379	357	379	0.98
7	12	1.7e-06	0.00014	22.8	1.8	3	23	387	407	385	407	0.96
8	12	9.6e-06	0.00077	20.4	0.4	1	23	413	435	413	435	0.99
9	12	2.3e-08	1.9e-06	28.6	0.4	1	23	441	463	441	463	0.98
10	12	0.00021	0.017	16.2	0.5	3	23	471	491	469	491	0.98
11	12	0.00011	0.009	17.0	3.4	1	21	497	517	497	519	0.96
12	12	5.6e-06	0.00045	21.1	0.1	1	23	525	547	525	547	0.98

Sequence Information

Coding Sequence: ATGAAACCGCTATTGGATAAAGTAGACGGAGACAACAGAACAGTTTTCGAAGTCCTATCCTTCGTAACTAATGTTAATATGTCTTCAAACAGCAAGTTTCCTCAACAGGTCTGCTTTGACTGCTATAATTTAATCTGTAAAACGGacgagtttaaaaaaaagtgtatgaAATCGGACAAAGTTTTGAAAGTCATGTTGGATAATGGTAAAGTAGAAATAAACATAAGCTCGAATGGGGTTAAAGAGGAAGCTTCGGATAAACCGAACTTGGAGCCCTACCAGTGTactatttgttttgaaaaattcacGACATGTGCGTCTTTAGAATCACACGTTATGTTTGGACATTATTGTGTTAAAGATACTAATAAGGATTTTGAAAACTTCAACAATATATCTCTCACGGGTGTTGAATGTGACGTTAGCGTCGTAAGCAGTATTAATAAGTCATACGAAATAAAGGAAGAACACGATGACCTGCCGGCAACTGATTTTTCGGTCTACTATGAAACCAATGATAGTTATAGTGAACCGTCCGAATATAAACAAGAAGATTGCGGCAAAACGTTTGAATGTTCTTGTGGTATGTTGTTCACAAACGACAAAGAACAGAAAGACCACGAAGAGACCTGTAACGAACCCGTAAATTCTTGTGCCgatataaaatctaaatttaaaaagccaGCCCAACCGAAACAAACAGTCAAGAAAAAGGAGGCATGCCCGAAATGCGACTCTTGTTTCTCGTCATTGAGATCATTGAGACGTCATCAGAAAGAAGTGCACAATGACGAATCTGTCGAACTATACCACTGCACGACTTGCCTGCGCAGTTTTCTAAGgaaaaattcatttatatcaCACATAAAAATGCACGAAATGAAGGACCACTTGAAATACGTTTGTAATACATGTAAACGAGAGTTCCAGCACCAGGCGCACTTGGACAACCACGTTCTGGCCGTCCACACGCGAGATAAGGGGTACAGTTGTGAAATATGCAGCGTGAGTTTCACAACACAGGAATCACTGAACATCCACCAGGCGACGCATAAGGTTGAGAAGAGACATCAATGCAAGCTGTGCAACAAGGCATTCCAAATGCTGTCCACTTTGACTGAACACATGCGCACTCATACGGGAGAGAAGCCACACCTATGCTCCATATGCGGTAGAGGCTTCACACAGAAAAACAATCTAGAACAACACGTGAGACGACACAAAGGGCTGAAGCCCTTCAAATGTGACACTTGTGAAAGGAGATTTGTATCAAAAGGAGAGTTGGTAGCGCATGCTCGTAAGCACAGCGGTGCCCATCCCTTTGTGTGTGACGACTGTGGCAAGGGCTTCACCACCTCCAGCTCCCTGGTCAAGCACCGGAGAATCCACACCGGCGAGAGGCCCTACGGGTGCGACCTTTGCCCCATGAGATTCTCAGCGTCCGGCACACTGAAGAATCACAGGCGAACTCACACCGGCGAAAAGCCGTACCAATGCTCCCACTGCGAAAAGGCCTTCGTCCAACGACAAGACTTGGTGTCGCATATACGGTGCCATACCGGGGAACGGCCGTACGTGTGCGCTAATTGTGGTCAGGCGTTCAGAAAGGCGTCGGCGTTGAAAACGCACGTTAAAATACACGTGAAAGATGGCAGCTCGGCTCTAACGTTGTCAACGATGCAGGACGTTAACGTGCTACTCTCACACCACGTCGGTAGCTAG
Protein Sequence: MKPLLDKVDGDNRTVFEVLSFVTNVNMSSNSKFPQQVCFDCYNLICKTDEFKKKCMKSDKVLKVMLDNGKVEINISSNGVKEEASDKPNLEPYQCTICFEKFTTCASLESHVMFGHYCVKDTNKDFENFNNISLTGVECDVSVVSSINKSYEIKEEHDDLPATDFSVYYETNDSYSEPSEYKQEDCGKTFECSCGMLFTNDKEQKDHEETCNEPVNSCADIKSKFKKPAQPKQTVKKKEACPKCDSCFSSLRSLRRHQKEVHNDESVELYHCTTCLRSFLRKNSFISHIKMHEMKDHLKYVCNTCKREFQHQAHLDNHVLAVHTRDKGYSCEICSVSFTTQESLNIHQATHKVEKRHQCKLCNKAFQMLSTLTEHMRTHTGEKPHLCSICGRGFTQKNNLEQHVRRHKGLKPFKCDTCERRFVSKGELVAHARKHSGAHPFVCDDCGKGFTTSSSLVKHRRIHTGERPYGCDLCPMRFSASGTLKNHRRTHTGEKPYQCSHCEKAFVQRQDLVSHIRCHTGERPYVCANCGQAFRKASALKTHVKIHVKDGSSALTLSTMQDVNVLLSHHVGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01153182;
90% Identity: -
80% Identity: -