Basic Information

Insect: Agara michaeli
Gene Symbol: -
Assembly: GCA_018245675.1
Location: DWDX01000122.1:1650-5212[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00016 0.013 16.6 3.4 1 23 133 155 133 155 0.97

2 12 3.4e-05 0.0028 18.7 1.6 1 22 160 181 160 181 0.95

3 12 8.6e-05 0.0069 17.4 3.9 1 23 211 233 211 233 0.98

4 12 3e-07 2.4e-05 25.1 1.4 1 23 243 265 243 265 0.98

5 12 4.8e-07 3.9e-05 24.5 0.9 1 23 271 293 271 293 0.99

6 12 0.00043 0.034 15.2 3.8 1 23 299 321 299 321 0.98

7 12 3.5e-07 2.8e-05 24.9 0.7 1 23 327 349 327 349 0.95

8 12 2.7e-05 0.0021 19.0 0.7 1 23 355 377 355 377 0.96

9 12 7.1e-06 0.00057 20.8 0.1 1 23 383 405 383 405 0.97

10 12 1.4e-05 0.0011 19.9 2.6 3 23 413 433 411 433 0.97

11 12 1.3e-06 0.0001 23.2 2.0 1 23 439 461 439 461 0.99

12 12 5.8e-05 0.0047 17.9 0.6 1 20 467 486 467 489 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00016	0.013	16.6	3.4	1	23	133	155	133	155	0.97
2	12	3.4e-05	0.0028	18.7	1.6	1	22	160	181	160	181	0.95
3	12	8.6e-05	0.0069	17.4	3.9	1	23	211	233	211	233	0.98
4	12	3e-07	2.4e-05	25.1	1.4	1	23	243	265	243	265	0.98
5	12	4.8e-07	3.9e-05	24.5	0.9	1	23	271	293	271	293	0.99
6	12	0.00043	0.034	15.2	3.8	1	23	299	321	299	321	0.98
7	12	3.5e-07	2.8e-05	24.9	0.7	1	23	327	349	327	349	0.95
8	12	2.7e-05	0.0021	19.0	0.7	1	23	355	377	355	377	0.96
9	12	7.1e-06	0.00057	20.8	0.1	1	23	383	405	383	405	0.97
10	12	1.4e-05	0.0011	19.9	2.6	3	23	413	433	411	433	0.97
11	12	1.3e-06	0.0001	23.2	2.0	1	23	439	461	439	461	0.99
12	12	5.8e-05	0.0047	17.9	0.6	1	20	467	486	467	489	0.94

Sequence Information

Coding Sequence: atgcTGGAAGTGTCGACAACATGTCGTAGTTGTATGAAAAGCAATATagaattatttgatttattcgTACCACTTAATCTAGATAATTGCACTCTCCAGTTGGCAGATTTACTTGCGACAACGGTTTCTATTCAGATAAGCAAAGAAGATGGACTGCCACAGAAAGTCTGTAAGGAATGTGTTGATTTCCTCCAGTCGGTGTACAAGTTTCGTACTCAAGCTTTATTTGCCGAACAAGAACTGAAAAGGCTGTGTTCGCTGCAGGCGGAtgtgaaaaatgaaatagaattgAAATCTGAAAACTGTACTGACTTTGATTCATACGATGATTTTATTGAGTGTGATGTCGTTCCTAAGGAGGAGACCGAGCAGAAGGAGGAAAAGCAACaggatatgtatatatgcaacATATGTCAGAAATCATACAGCAATCACAGTCGATACATAAAGCATTTGTCGTCTCACACTGATCCTACTTTCGTTTGTAGCGTTTGTCAAAAGGCATTTCATAAGCGATCATCCCTAAGCAGGCATATgaatagaaaatgtaaaacgGCTATACAATTGTATGGCAGTATAGATAATGCGACACAAGTTTCAATAAAGAAAGAGGAGAACGACGATGGACTGTTCAGATGTCCTAATTGTCCGCTGACGTTCACAAAGCATCGATCCCTTTTGTCCCATCAAAAGAAGCACAAGTCGAAGCACAGAGAAGCCAACAACTACCAGTGCGACTATTGCAACAAAGTGTTTACGGTCAAATCAGTATTAAAACGACATATCAAGCTCCATTCGTCGAATGAACAATACCAATGCTCGATGTGTCCGAAAAAGTATTCAAGAGAGGATCAGCTCGAGGAACATATGAATAAACACACCGGCCGTAAGCCCCATTCTTGCCCTTACTGCATCAAAGCATTCTCCCAAATGTGTAGCCTCAAAGACCATATCAGGACCCATACAAAGGAAACACCGTACCTGTGCTCCGAATGCGGGAAACGGTTCGCCAACAGCTCCAACTTGCGCCAGCACCTCGTGAGGCACTCCGGCCACAAGCCGTTCTCCTGCAACCTCTGCCCAAAAACTTTCTACACGAAAGGTCAAATGAAGGCGCACGTGGTGTCGCACGCGGGCGTGCACGCGCACGAGTGCCCCGAGTGCGGCGCGGCGCTGACCACGCCCAGCTCGCTCAAGAAGCACCGGCTCATCCACCTGGGCGTGAAGCCGTACGGCTGCGACACGTGCAGCATGCGCTTCTCGGACCGCGAGCACCTCAAGCGCCACCAGCGCGTGCACACCGGCGAGAAGCCGTTCCGCTGCGCGCACTGCGAGCGCGCCTTCTCGCAGAGCAACGACCTGGTCAAGCATCTGCGCACGCACGTCGGACAGAACATCTACCAATGCACGATATGCGATATGAAGTTCAGACTCCTCAGTGAACTGAAGCGACACTACCCCGTTCACTACATGAAGAGCAACAATATGAATGACATAGCTACGAACCAATCGATCCTGTTAATGGGAGGGCAGGCTCCGGAGAGCTGCGACCGGCCGCCAGGTGGCGCTGCTGGTGAGGACCAGCCGGACAATCAGATAACGATAACATTCAACAGCAACGTGCTCGACAAACACGGTATCGCAGGCGGCATCACCATTGATATATCACCGGCTAAAAGTTAA
Protein Sequence: MLEVSTTCRSCMKSNIELFDLFVPLNLDNCTLQLADLLATTVSIQISKEDGLPQKVCKECVDFLQSVYKFRTQALFAEQELKRLCSLQADVKNEIELKSENCTDFDSYDDFIECDVVPKEETEQKEEKQQDMYICNICQKSYSNHSRYIKHLSSHTDPTFVCSVCQKAFHKRSSLSRHMNRKCKTAIQLYGSIDNATQVSIKKEENDDGLFRCPNCPLTFTKHRSLLSHQKKHKSKHREANNYQCDYCNKVFTVKSVLKRHIKLHSSNEQYQCSMCPKKYSREDQLEEHMNKHTGRKPHSCPYCIKAFSQMCSLKDHIRTHTKETPYLCSECGKRFANSSNLRQHLVRHSGHKPFSCNLCPKTFYTKGQMKAHVVSHAGVHAHECPECGAALTTPSSLKKHRLIHLGVKPYGCDTCSMRFSDREHLKRHQRVHTGEKPFRCAHCERAFSQSNDLVKHLRTHVGQNIYQCTICDMKFRLLSELKRHYPVHYMKSNNMNDIATNQSILLMGGQAPESCDRPPGGAAGEDQPDNQITITFNSNVLDKHGIAGGITIDISPAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -