Amic029959.1
Basic Information
- Insect
- Agara michaeli
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018245675.1
- Location
- DWDX01065345.1:1-656[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-19 2.7e-16 59.6 0.0 1 43 69 112 69 114 0.95
Sequence Information
- Coding Sequence
- CAACAACCCCTGGAGAGGCCACCGCATCTCGGCGATCTGTCGTTCATGAGGCCGGACAGACACGTGTCTGTGATCAAAACACCACCCGACAGTCAAAGAAACTACGCGGCGCCCAGCAATTCGAGAGGCACCGCGAATAATAATGGACAGCCGGCGACCGGCGGCAAGGGGACGAGACCTAAGAGAGGGAAGTATAGGAACTACGACCGAGATAGCCTCGTCGAAGCTGTAAAAGCTGTCCAAAGGGGCGAAATGTCAGTGCACCGAGCGGGTTCTTACTACGGGGTGCCGCACTCGACGCTAGAATACAAGGTCAAGGAGCGACATCTTATGCGTCCTAGGAAACGAGAACCGAAACCGCAACAGGAGGTGAAGCCGCAACCGCCGAAGCCCCCGCAACCGAAGCCGCCGACCAAACCGTTCTCGAACGGCTTAAACGGACCCGAAGCGCCCGGCTACCCGCCGAACTACCCGTTCTGGCAGGCGACCGGCTTTGCACCTCCCGCGCCCGACCTGTACGCGTCGCACATGATGCGGAGACTGCGCGAGGAGGCACCGCCGCCCGCCAACGGCTCCTTCCTGGAGGGCATCATCCGATCCAGCCTGGAGCGGCCCGGCGCGACGCTGCTGCAGCGGCTGACGGGCGAGGCGCGGCC
- Protein Sequence
- QQPLERPPHLGDLSFMRPDRHVSVIKTPPDSQRNYAAPSNSRGTANNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQEVKPQPPKPPQPKPPTKPFSNGLNGPEAPGYPPNYPFWQATGFAPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPGATLLQRLTGEAR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01377390;
- 90% Identity
- -
- 80% Identity
- -