Amic022013.1
Basic Information
- Insect
- Agara michaeli
- Gene Symbol
- Jarid2
- Assembly
- GCA_018245675.1
- Location
- DWDX01030066.1:1-2818[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-21 6.3e-18 65.6 0.1 6 89 59 139 56 139 0.93
Sequence Information
- Coding Sequence
- CCTGTGGCATATTTTGATTCAATAATGCCAACTGCTAGTAAATACGGCATTTGTAAAGTAGTGCCACCGACAGACTTTAAACCATCGTACGACATGTACGACGAGATGGTGTTCAATGCAACGGATCAATACATTGCGCGGCTGTTCTGCAGATGGGGTCCCGGCTCAAAGGAAATGTCTACTATTAAAGCATATTTGGCATCGCAGAGTGTGGTTTTCAAACGGGCCCCTTTGTATGAAGGTATGGAGGTGAACCTGCCCAAACTGTACCGGCTCGTGCAGCGCCACGGCGGGTTAAAGAAAGTCATAGAACGAAAACGATGGAGTCGCGTAGCTGAAGAAATGCGTTTCACGAAGGGAGCCAATCCAGAGAAAAAATTAGACCAATTATATGTCAAGTATCTACTTCCTTACGATACGCTTTCATATAAGGAGAGGTGTCAAATAATGTCGGGTGTTGAGCGCGTTTGGAGTAAAAAATATCGCAAAATGATGGAGCGCGCTTTCGATCCACTTCATAGACAAAAGAAGCTGCTTATTGATTCTGACTGTTcggaagaagaagaagaggaagaagaagaagaggaGGAAGAAGAGGACTCCGACGATGATGAATATATTACAAGGGCTCTTGCGGACGCAGAAGAATGTGTGGCTCCCGGACGACGAATGAATCTAAACCTTTTCaaaaaggtGGCTTCGACAGCTCTAGATACTTTTTTCTCAACATCAACCTACCCTACACCAGCTGAGGTGGAAGAAGAATACTGGCGTTTGATAATGCTTGGCGCTGATCACCTATGTGTAAACTCTGCTAGCATCGATACTGGCACTATCGGATATGGCTTTACGAAAGACAAACTGGACGATTATGGTGATCACCCTTGGAATCTCAagATGCTAGCTGACAACAGCGGCAATGTATTGCGTTTTTTAGGTCCCGTATTAGGTGTAACTGTACCTACATTACATCTTGGAATGGTATTCTCCACCAGCTGCTGGCACAGAGATCCCCATGGTCTACCTTGGATGGAATTTATGCATAGCGGACCTCCAAAAATTTGgtATGGTATTCCCGATGAGCAAAGTCACAGTTTCCGAAAGGCGGTCGAATATTTGTGTCCAACGTCATgccaaaataaatcaatttggtTACCATCTGATATTGCTATGATACCCCCGAACCTGCT
- Protein Sequence
- PVAYFDSIMPTASKYGICKVVPPTDFKPSYDMYDEMVFNATDQYIARLFCRWGPGSKEMSTIKAYLASQSVVFKRAPLYEGMEVNLPKLYRLVQRHGGLKKVIERKRWSRVAEEMRFTKGANPEKKLDQLYVKYLLPYDTLSYKERCQIMSGVERVWSKKYRKMMERAFDPLHRQKKLLIDSDCSEEEEEEEEEEEEEEDSDDDEYITRALADAEECVAPGRRMNLNLFKKVASTALDTFFSTSTYPTPAEVEEEYWRLIMLGADHLCVNSASIDTGTIGYGFTKDKLDDYGDHPWNLKMLADNSGNVLRFLGPVLGVTVPTLHLGMVFSTSCWHRDPHGLPWMEFMHSGPPKIWYGIPDEQSHSFRKAVEYLCPTSCQNKSIWLPSDIAMIPPNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -