Avir007018.1
Basic Information
- Insect
- Agapostemon virescens
- Gene Symbol
- Gata6
- Assembly
- GCA_028453745.1
- Location
- CM052087.1:14785334-14789993[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.088 3.8e+02 1.5 6.5 2 26 635 657 634 660 0.80 2 3 7.7e-16 3.3e-12 46.5 10.7 1 35 690 723 690 724 0.97 3 3 0.62 2.7e+03 -1.2 0.8 6 17 843 854 842 858 0.78
Sequence Information
- Coding Sequence
- ATGAAGGAAAGTCTGGTGAAGCGCGAAATCAAACACGAGTGGGAGGAGAGTCCGGTCGACGAGGGTTCGTCCAGAATGGCCGCGAGCGGAAACGCGACCGTGTCCTCGATCGACGAACAACGACAAGCGATGGAAAGTCCCCGAACGGTGATCACGACGAGAAGACACGTGCGCACGATCACCACGGCTGGCCACATCACCGAGAACGTACCGGAACCCGAGTCGGAGCCAGGACCCGATTCTCCGGACGCGAACGCGATTTCCGGCGACCTTCAACTCcagccgcatcatcgtcatcagcttcaaccgcagccgctcgaacaacagcaccgccaagctcgttcgcgcaactatcaagacggggaagaacaggatccgggaagtcaacaagcagcagcgcactttgtacaaatctcgcggtcggagacggagcttcaacaacagcaacagcagcaacaacagcaacagcaacagcaacagcagcagcagcagccgcagcagcatcaacaccagcaccaacaccaacaccaacaccaacatcaacaacagcaccaacaccagcaccaacATCAccgggtcggcgaccaacagcggGTCGTTTATCTGACGAGCAACGGACAGGAACTGAAGGTCGAGGTACCGGATACGGTGGAGCACGGTCAGTTGTCCGTCAAGGAATCGACCAGGTACGAGACCACCGACGGACCCAATCGAAACGAGATGGAAAGCATCTTCGTGTACGCGACGGACGATCAACAGCTGCGAAGGGAGAATCACGGCATAGCGATTCAGCTGCAAGAGAGACGCGGACACGCGGCCGCGACTCAGCACAGATACAGCCCGCGGGAGGCCGGTCAATCGAGCGGAGGAAACGGATCGACCGGTGGCAGGACGTATCATCACGGATCCCCGGTGTTGGTAGCCACCACCGACGAATACGAGGGAGCAACGAACGCGACGACCGGACCTGGAACCGGAACGAACGCGGAAAACGCTGCCAGAACGTCGACGGGATCGGGCTCCGGGTCTGGCTCCGGTTCCGGTTCCGGATCCGGATCCGGTACTCCGACCGTCCAGTTGGGATCGCCCGTCGCACCCGCTTACTCTCCACCGATCGTTGCCGACGGTatctctggttctgcgccgagtggatcgcagcaacagcagcaacaccaacatcatcatcaacagcagcagcagcagcagcagcagcagcagcagcagcatcatcacgtggtgaccggttacgtggatccagtggtggacAGATTCACGGTATCGGTCGCAAACGACAAACAGGTGTCGAGCACGTACACCACTTTGGAGACGGTCGCGATACCGCCGTCGCAACCCGTACAGTATGCCGCGCAATATATACACAGCAACGAAACCTTTCAACAGACTTCGACCTACGCTTACGGAAAATCCGGCGAGCAGCTGATACTGACGTATCCGTCTACCGGTCAATTGGGTCCTCGCGTCGGTGGTGTCGAGTCGCCCGGTAGCAGTTACATGAAGGGCGATCCGACGCTGGCGTCGTCGGTGGCAGCGACGCGCGGAGTGTCGCTTCACTACGATCAGCCAAACTCTTCGAGCCCTCAGATGATGTTGTACAGCGGTGGAAGCACCGCGTTCTCGTACGCGAGGCCGACGACCGGGACGGAATATTGGAGCACCGCGGGTACGCCGTCGCCGCCGAATTTCGACGGTAATCAGGCGTACCCGGCGGGCGTGGCTACCATCCCGATCGGCGACGCGACCAACATGCAGCTTTGCTCCGGCGGAGGATACAGCCTGTCGCCCGGTACCACCGGAGCACCTTCTCCCTGGTCCGGTTTGCCGATATCCACCTCCGAGGAGAGCTTCGACGGAACGATGACCATCGCCGAACAAAAAGAATGTCCCAGTTGCACGAATCTGACCAACGTCTGGAGGAGAGACGAGACCGGTCACTACTACTGTTCCAACTGTTTCTGCAAACCGAACGGAGTCAACAGAGTGGCCATGAGATGCGGCAAACCGAAACAAACGGTCGCTCCGACGAACGTACGGAAAACGGGTATGCAGTGCGCGAACTGCAGGACCTGCAACACGACCCTCTGGAGACGAAACAACAACGGCGAACCGGTGTGCAACGCGTGCGGCCTCTACTACAAACTTCACAACGTAAACAGGCCGCTGAGCATGAAGAAGGAAGGCATTCAGACGAGAAAGAGGAAACCGAAAAATCATACCGCCATCGGCGGCAATCTGGCCGGACCCAGCGGCATGCACAAGACCGAGATTAAGTCTAACTTGCTCGTGGACCCGCTGCAGCTGAACGTGTACGGGATCGGCGGCAGCGGTAACGGGGAAACGGGCGGGTGCGGGGGCAGGGTCGTCGCCGGTACCGAGATCGAGATCGAGATCGAGATCGGGAACGGGAACGAAAACGGAACCgagggaggaagcgaaaggtcggaggagaaccatccgcctgtaggtacaccgacgacgatgacgacggtgacgacgacgacgacgacgacgacgacgacgacgacgatgcgatcggggcacgcgcactcgcccctcgcaTTACCCACCGCCGCCGTTCTGAATCGTCAAACCACGCTGACCGTGCCACCGCTAGAGCCGATCGCTAGTCGGCCCAGCGTCGACCCGATCTCGGTTATAACTTCTACGACGGCCGTTCACGCCGAGGGAACGACCTAG
- Protein Sequence
- MKESLVKREIKHEWEESPVDEGSSRMAASGNATVSSIDEQRQAMESPRTVITTRRHVRTITTAGHITENVPEPESEPGPDSPDANAISGDLQLQPHHRHQLQPQPLEQQHRQARSRNYQDGEEQDPGSQQAAAHFVQISRSETELQQQQQQQQQQQQQQQQQQQPQQHQHQHQHQHQHQHQQQHQHQHQHHRVGDQQRVVYLTSNGQELKVEVPDTVEHGQLSVKESTRYETTDGPNRNEMESIFVYATDDQQLRRENHGIAIQLQERRGHAAATQHRYSPREAGQSSGGNGSTGGRTYHHGSPVLVATTDEYEGATNATTGPGTGTNAENAARTSTGSGSGSGSGSGSGSGSGTPTVQLGSPVAPAYSPPIVADGISGSAPSGSQQQQQHQHHHQQQQQQQQQQQQQHHHVVTGYVDPVVDRFTVSVANDKQVSSTYTTLETVAIPPSQPVQYAAQYIHSNETFQQTSTYAYGKSGEQLILTYPSTGQLGPRVGGVESPGSSYMKGDPTLASSVAATRGVSLHYDQPNSSSPQMMLYSGGSTAFSYARPTTGTEYWSTAGTPSPPNFDGNQAYPAGVATIPIGDATNMQLCSGGGYSLSPGTTGAPSPWSGLPISTSEESFDGTMTIAEQKECPSCTNLTNVWRRDETGHYYCSNCFCKPNGVNRVAMRCGKPKQTVAPTNVRKTGMQCANCRTCNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKEGIQTRKRKPKNHTAIGGNLAGPSGMHKTEIKSNLLVDPLQLNVYGIGGSGNGETGGCGGRVVAGTEIEIEIEIGNGNENGTEGGSERSEENHPPVGTPTTMTTVTTTTTTTTTTTTMRSGHAHSPLALPTAAVLNRQTTLTVPPLEPIASRPSVDPISVITSTTAVHAEGTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00860801;
- 90% Identity
- -
- 80% Identity
- -