Avir008203.1
Basic Information
- Insect
- Agapostemon virescens
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_028453745.1
- Location
- CM052089.1:17473020-17482328[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.68 1e+04 -3.1 0.5 73 89 365 381 351 411 0.48 2 3 8.8e-13 1.3e-08 35.7 0.2 1 28 724 751 724 756 0.94 3 3 6e-24 9e-20 72.3 0.1 175 218 769 812 763 812 0.96
Sequence Information
- Coding Sequence
- ATGATCGCAGATCAGGTCGTCTATATGGAATCGCCTTCGGCCCAGGAGCGTGTTGTCGAGGGTGAAAAGGATTCCAGCTCGATAAGGTCGCCGGGACCGGTCGGCGAGTCCACGGAGTCCGTCGATGACGCCGGCCCGACGACCGATCCCGAGAAAGTTGCTTCTCGATCGTCCGGCGGCGACGACGACGGCGACGACGATGGTATCGATGGTTCCGTGCTATGTCCCGCGTCCGAGAACATTACACCTGACGCCAAGGTGAGCTCGAAGATGGGTCTGAAGCTGGGCAAGTGTAGCTCGATGACGAAGGTCGTCGAGGAAGCGGCAGAGCCGAAGGATGCGGTCGAGCTGCGGAAGTGTGCCGACGTGATCGACGCGACGCCGACCAAGGGCGAAGAGGATCGCGCGATCGTCGGCGGGGGTGGTATGCTGATCAGCACCCCGGTGTCGAGGAAGAGACCGGCCAGCGATTTTCTACCGATCAACGCGGAGATCAAGCGGATCGGCGTGGAGATACCGGAGAACGAGGGGAACAGTCAAGTGAGAAGCGACGTGAGGAGGATCTCGCCGGTGCTGGTGAGCCTCCGGGAGCGCACCCTGGGCGAGATATCTCTCTCCTCGGACTCCTGTCTGTTCGACGACGACGTAAACTCTCGGTGTCTGTCGCGGAACAGCAGGCTGCTAGACAACTCGCTGCCGAACGCTTGCAGAGTGAGCTTGAACAATTCCGTGGAGTACGAGGCCGGGAGCATCGGCTCGGAGTCGAGGCTGTACGCCGCGAGCACGCCGAATCAGGAGCGCGCGAACGGCGAGGACGAGACCGATTGTCGCCGGAAGATCGAGTTCACGGACGCGTTCATCGACGAGGATTCTTGTTGCTCGTTGCCGAGCGACAGTCCCGAGAGAGACCACCGGCCTTGCCAAGAGAAACAGTGCGAGGAGCCGATCGAGACGTGTCCTTGCAAGAGCAACGGTGCCGAAAATTCTCCGAGCAGCGCGAACGATACGGAAGAGTCGTCGGGATCGTATCTGGTGGTCGTGCTGGAGCGGGTCGACTGCTCGCCGGACAAGTACGAGAAGAGGAGGCTGAGCAACAAGAAGAAACAGAGGAGCGAGGAGGACGTTGCGCAGGACGCGGAAACGGAGCCGGAAGAAGCGTCGAAGAAGCCGAGTTGCGTCCAGAGGTGCTTGCCCGAGAAGAAGATCGTCCAGAAGACCGAGTCGGCGTCGACGACCAAGCACCAGGGCTCGCCCATAGTGACCAGGTCGAAGACGCCGCCCGTCGATCAACAGTTGACGAATTTGAACGACGTCAAACAGTGCAAAGTGATCCTGGAGAAGCTGGACGCGTCGCACAAGGTGCGATCCCAGGATGAACCCACGGCCGGAACCGCGAAGAAGAGCACGGTCCAGGTCGAGCAAGCCGCGTCCTCACCCCCGTCGACATCCGCGTTGACATCCGCGTCGACACCCGCGTCGACACCCGCGTCGACACCCGCGTCGACGACAACAACCCCCACGGAGAATCTGCGACCGTTGAACAATCGAAATTCGTCCGAAGCGAGGCCGAACTCGCCGGAAGAACCTCTCGAAGCCTCCGCCGATGCCACGGAGGCTGTCGACACCGAGACAGAGACTGAAACCGGCTCCGACAGCTCCGAAGTGTCCTCCATGACGAACGTGCGTCTTCGTACATGCGACGACGACGCCGTTTCCGATCAAGTGTCTTGCCCCGAGAGCGAGTCCATGTGCTGCGTCGACATCAACCCCGAGATCATCACCAGGCTCGAGGCAGAGAGGCCCGAGGCTTTCACCGAGGACTCCGCCGAGAGCCTGGCCCTTGCCACCGGTGCTAGGGACGAGGTCAGGTCCGATGGCAGCGATTCCGGACTTGGCAGCGAGATACCTGGCGATCCTGGACCTGCGCCCGCACCTGAAAGCGACTCCGAAACTTCGTTCTTGGATAGGATACCCGACGACATCCTGTCCGACAAGGAGAAGGCCGTGAATCAACTGGACGGTTTCGTCCCCAACGCCGTCGTACCAGGGACGCCGCAGGCGCCGTTGACGACGTTCCCCAGTCCACCGAAGAGCAATCTAAAAAGAAGATTGACGGACTGCATGGAAGAGGCTCCCAACCCGAAGAGGAGCAACACCGATGAGTCCATGAAAAAGAAACGCAACATTCAGTTCGACGCGGTGACCGTCTACTATTTCCCCAGGGCACAGGGATTCACCTGCGTGCCTTCTCAGGTGAGAGAAACCCCTAAACTCCCATTCCGAACTACCGATGCTTTCTCGGCTGTCGATCGAGCCGGCTTCCCGTGCGGGTGTACCCGCGATGGCTGCGCGAACAGTTCGGGCCGGATCGAATTTAATCCAGTACGCGTGCGGACACATTTCATTCACACGCTGATGCGGCTGGAGCTGGAGAAGAAGCAGCGGGAGGAAGAGGACGGTACGGATCATGATGCTTCCGACAATCAGAATGGTAGAAGTCCCTTAAGGGAGATCAATTTGGGGTCCGTGATGGAGAATAGAAATACAGAGTCATGTTTGAACGGTGGCGGTTTCACGACGTTGCATTACGAGAATCACGATGCCGGAGACGGTGGGCCAAATTGTCAACCAGACGTATCTGTCGCCAGAGAGGATAGTCTGGATCTGTACGCGATTAGAGACGATTGTTATCCTAATGAGGACACTGTCGATGGTACGCAAGGACCTCAAAGGAAACTACATCCTGAGTTTAGTCAAGCATTTCAAACGTTCTCAGGGCAAACCGGTGCCGGTGTGAACTTCCAGCAGCCCGCTTATCAGGACTATCAACCTTACGCTAACCTTCCTTCTACGTCTAGGGTGCAATTCCAGCCGCAGTTTCAAGCAGTCCCAGGAACAACTGGGTTTTCGCATTACGCCACCTACGGGCAGGACGCGGCAGCCACGCTACAGGGGAATTGTCAAGTCCATCCAGGCCAACATGCTACCGCTTACGAGACAACATTCGCTCACGATGAGACGACCGGATCGCAGTATACAAACCTGAACTCGGTCCAACCGCACGCGGCTGTACAACAGATCAGCAAACTCGAACCGTTCTCCGAGCTACTGTCCGGCAGATACTCGTACTACGGCGAAATGGAACCGCAGGCGCACGGTACTTACCATGGAAACGGGACGAAGGTCGAGGTAGAGAAGGGCCAAGGTAACGAGCAGCAATCTGAGAGTATGGAGGAGTGCGACGAGAACTTCGGGGAGATTATTAAAAAGTCGATGGTCGAGACCGTGTCTGCTTAA
- Protein Sequence
- MIADQVVYMESPSAQERVVEGEKDSSSIRSPGPVGESTESVDDAGPTTDPEKVASRSSGGDDDGDDDGIDGSVLCPASENITPDAKVSSKMGLKLGKCSSMTKVVEEAAEPKDAVELRKCADVIDATPTKGEEDRAIVGGGGMLISTPVSRKRPASDFLPINAEIKRIGVEIPENEGNSQVRSDVRRISPVLVSLRERTLGEISLSSDSCLFDDDVNSRCLSRNSRLLDNSLPNACRVSLNNSVEYEAGSIGSESRLYAASTPNQERANGEDETDCRRKIEFTDAFIDEDSCCSLPSDSPERDHRPCQEKQCEEPIETCPCKSNGAENSPSSANDTEESSGSYLVVVLERVDCSPDKYEKRRLSNKKKQRSEEDVAQDAETEPEEASKKPSCVQRCLPEKKIVQKTESASTTKHQGSPIVTRSKTPPVDQQLTNLNDVKQCKVILEKLDASHKVRSQDEPTAGTAKKSTVQVEQAASSPPSTSALTSASTPASTPASTPASTTTTPTENLRPLNNRNSSEARPNSPEEPLEASADATEAVDTETETETGSDSSEVSSMTNVRLRTCDDDAVSDQVSCPESESMCCVDINPEIITRLEAERPEAFTEDSAESLALATGARDEVRSDGSDSGLGSEIPGDPGPAPAPESDSETSFLDRIPDDILSDKEKAVNQLDGFVPNAVVPGTPQAPLTTFPSPPKSNLKRRLTDCMEEAPNPKRSNTDESMKKKRNIQFDAVTVYYFPRAQGFTCVPSQVRETPKLPFRTTDAFSAVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEDGTDHDASDNQNGRSPLREINLGSVMENRNTESCLNGGGFTTLHYENHDAGDGGPNCQPDVSVAREDSLDLYAIRDDCYPNEDTVDGTQGPQRKLHPEFSQAFQTFSGQTGAGVNFQQPAYQDYQPYANLPSTSRVQFQPQFQAVPGTTGFSHYATYGQDAAATLQGNCQVHPGQHATAYETTFAHDETTGSQYTNLNSVQPHAAVQQISKLEPFSELLSGRYSYYGEMEPQAHGTYHGNGTKVEVEKGQGNEQQSESMEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -