Avir015105.1
Basic Information
- Insect
- Agapostemon virescens
- Gene Symbol
- Iswi
- Assembly
- GCA_028453745.1
- Location
- CM052091.1:6572367-6575399[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-06 0.0031 18.3 0.0 3 41 799 838 798 838 0.96 2 2 0.0049 7.7 7.4 0.0 3 21 901 920 899 923 0.90
Sequence Information
- Coding Sequence
- ATGTCGAAGACAGATGAGAATGCAGACACAGGAGATACGGGAGATAATTCAAATGGATCATCGGCGGAGACCACGTCGTCTCGTGGTGGTGACTTCGAGACGAAACTCGAAACTGATCGAAGTAAACGTTTTGACTATTTACTGAAACAGACTGAAATATTCTCCCATTTCATGACAAACAATCAGAAGGACAAAGCTGGTAGTCCCCTAAAAATCAAGGCTGGCAGACCCAGAAAGCAACAGCCAGAGATACCAGTGAAAACTGATTCTGGTGATCACAGGCATCGTAAAACCGAGCAGGAAGAAGATGAGGAGTTATTGGCCGAAAGTAATGCTAGTGTAGCACCTACTACACGTTTCGAATCCTCGCCACATTACATTAAGTCCggtgagttacgagactatcaaatacgtgggttaaattggatgatatctttgtatgaacatggtatcaatggtatcttggcggacgagatgggtcttggtaaaacattgcagactatttcgctgcttgggtacatgaagcacttcagaagcattcctggccctcacatagtcattgttccgaagtctactctggctaattggatgaatgagttcaaaaaatggtgtcctaccttaagagcagtctgccttataggagatgcagaaactaggaatactttcatcagagaagttatgatgcctggcgaatgggatgtttgtgtaacatcctacgagatggtaatcaaagaaaagtcagtatttaagaagtttaattggcgttatatggtaatcgacgaagctcacagaataaagaatgaaaaatctaagctttcggagatccttagagaatttaagacggctaatcggcttctcttgactggaactcctttgcagaataatcttcacgaattgtggtcattgctcaattttctattgccagatgtatttaatagttcggacgattttgattcttggtttaatactaatagtttcttaggtgataattcattagtcgagcgattacatgccgttcttcgaccattcctcttaagacgcttaaaatctgaagtagaaaaaggactgaaaccaaaaaaagaaatcaaggtatacattggtcttagtaagatgcaaagagaatggtacacaaaagtgttaatgaaagatatagacattgtaaacggcgcaggaaagattgagaaaatgcgattacagaatattttgatgcaactacgcaaatgttgtaatcatccgtacttgttcgacggtgcagaacctgggcctccgtacacgaccgatgaacatcttgtttataactgtggtaaaatggtaattttggataaattactaccaaaattacagcaacaggagtctcgtgttcttatatttagtcaaatgacaagaatgttagacattttagaagattactgccattggagatgttttcaatactgtcgtttagatggtaacacagcgcatgaagatagacagcgtcagattaatgaatacaatgcacctgaaagtgagaaattcatttttatgctgtcaactcgtgctggtggtttaggtattaatttagcaaccgcagacgtagttattatttatgattctgattggaatccacagatggatttacaagcgatggatcgagcccatcgtataggtcaacagaaacaagttcgtgtattcagatttattacagagaacactgtggaagaaaagattgtcgagcgtgctgaagttaaactacgtttagataagttagtcatacaacaaggacgattagttgatgctaagcagacggcattgaacaaagatgaaatgttgaatatgatcaggcatggtgcgaacgaggtgttcgcatcaaaagatagtgctataacggacgaagatattgacactattctCCAGAAAGGTGAAGCAAAGACGGAAGAAATGAAACAGAAGCTGGAAAGCCTAGGCGAATCTTCCCTCCGCAATTTCACAGTAGATGCACCTACAGATTCGGTGTACCAATTCGAAGGCGAGGACTACCGTGAAAAACAAAAGATCCTTGGTCTTGGCAATTGGATAGAACCACCGAAGCGAGAACGTAAAGCCAATTACGCGGTCGATGCATACTTCAGAGAAGCTCTTAGAGTATCAGAACCAAAAGCTCCTAAAGCACCCAGACCTCCAAAGCAGCCCATTGTGCAAGACTTCCAGTTCTTTCCTCCACGATTATTCGAGTTACTCGATCAAGAAATTTACTACTTCCGTCAAACCGTAGGCTATAAGGTTCCAAAGAATCCTGAACTGGGGTCTGACGCAGCCAGAATTCAAAAAGAGGAGCAACGTAAAATAGACGAGGCGCAACCGTTGTCCGATGAAGAAGTCGTTGAGAAAGAGAAACTTCTCACGCAAGGCTTCACGAACTGGACCAAAAGAGACTTCAATCAGTTCATAAAGGCGAACGAGAAATATGGTCGCGATGATATAGAAAATATCGCCAAGGAAGTAGAGGGGAAGACACCGGAAGAAGTGATGGAATACTCGGCAGTATTCTGGGAACGATGCCACGAGTTGCAGGACATCGATAGGGTGATGGCGCAAATTGAACGTGGAGAAGCGAAGATACAAAGGCGAGCCGGCATCAAGAAAGCCCTGGACGCAAAGATGGCCAGATATCGGGCTCCGTTCCACCAATTGAGGATAGCCTATGGTACCAACAAGGGGAAGAACTATACCGAAGAGGAGGATCGATTTCTCGTTTGTATGTTACACAAATTAGGTTTCGACAAAGAGAACGTGTACGAAGAGCTGCGAGCTACGGTTAGATCGGCACCACAGTTTCGATTCGATTGGTTCGTTAAGTCTCGCACAGCGTTGGAACTACAACGACGTTGCAATACCCTGATCACTTTAATTGAACGTGAAAACCAAGAGTTGGAGGAGCGAGAGAGGCAAGAGAGGCGAAAGAAGGGCGGCAGCATAGGAGCTAAACCGGCTTCGAAGCGGAAACAGGAGAACCTACCAGCGCCCCAAGACAAACCACGGAAAAAGAAGAAGTAA
- Protein Sequence
- MSKTDENADTGDTGDNSNGSSAETTSSRGGDFETKLETDRSKRFDYLLKQTEIFSHFMTNNQKDKAGSPLKIKAGRPRKQQPEIPVKTDSGDHRHRKTEQEEDEELLAESNASVAPTTRFESSPHYIKSGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHFRSIPGPHIVIVPKSTLANWMNEFKKWCPTLRAVCLIGDAETRNTFIREVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILREFKTANRLLLTGTPLQNNLHELWSLLNFLLPDVFNSSDDFDSWFNTNSFLGDNSLVERLHAVLRPFLLRRLKSEVEKGLKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRMLDILEDYCHWRCFQYCRLDGNTAHEDRQRQINEYNAPESEKFIFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKLRLDKLVIQQGRLVDAKQTALNKDEMLNMIRHGANEVFASKDSAITDEDIDTILQKGEAKTEEMKQKLESLGESSLRNFTVDAPTDSVYQFEGEDYREKQKILGLGNWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRQTVGYKVPKNPELGSDAARIQKEEQRKIDEAQPLSDEEVVEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIENIAKEVEGKTPEEVMEYSAVFWERCHELQDIDRVMAQIERGEAKIQRRAGIKKALDAKMARYRAPFHQLRIAYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRATVRSAPQFRFDWFVKSRTALELQRRCNTLITLIERENQELEERERQERRKKGGSIGAKPASKRKQENLPAPQDKPRKKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305004;
- 90% Identity
- iTF_00983554;
- 80% Identity
- -