Basic Information

Insect: Agapostemon virescens
Gene Symbol: SMARCC2
Assembly: GCA_028453745.1
Location: CM052098.1:259320-263339[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.1e-14 1.7e-11 44.8 0.2 3 44 639 680 637 682 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.1e-14	1.7e-11	44.8	0.2	3	44	639	680	637	682	0.95

Sequence Information

Coding Sequence: ATGCTCGCATTAGGGCCGAAAAAGGACGGAGGTCCCAATGCAAAATTTTTCGAATCCCAAGAAATTCTCACACAACTTGACGGAGTGAAACAATGGCTGTTAAAAAATTGCAAAAAGTATGTACAAACGGACCCACCTACTAATAAAAGTTTAGCCACTTTAATAGTGCAATTGTTGCAATTTCAAGAAGATAATTTAGGAAAAAATGTTTCAAAACCACCTATGACCAGACTTCCTATAAAATGTTTCTTAGATTTCAAACCGGGTGGTGGTTTATGTCATATTCTTGCTACCGCGTTTCGTATTAAACAAGAGCAAGGATGGCGCAGATTTGATTTTCCTGTTGGAAAGTCAGGATCTCGAATGGATAGAACGGTGGAAATGTTTGTGGCGGCGGAACGAGCTCTAGTGCAGAACAGATGTTTCACAGTACCGAACATATATGTAAGAGCAGACGTAGACAAATCAACAGCAGCAAAAGTGAAGGAAGCGGTTCGACGACATCAAGGCACCATCGCGGAGAACGAAGCCGATGCTACTCACATTATCTATCCTTCTGTAGATCCTATGGAGGAGGAATACGCGCGGCCTTGCATGAGGCGTGAAAGATCCGTTCTTCTTCATTGGTATTACTTTCCAGATAGTTACGATTCATGGACTAGTTTAGACCTTCCCTGGGATTTTCCAGAAGGAACAGTTGCAAATACTAGCGTGAAATCAGTGTACAAAGTATCAGCAACGTGGGCGCTGGACTTGGATCAGTATAACGAATGGATGAACGAGGAAGATTATGAGATAGATGAAAATGGTCAGAAAAAAATACACAAGTACAGGCTTTCGGTGGAAGATTTAATGGCTCAACCGTCGCATCCGCCTCCTTCTGCGAAAAAGCCGAAACGAAAACGATCTCCCAGTCCACCTCCAAAACCAGGAAAACGTAAAAGTGCGAGAGCGCCGTCGAGTGTTCAGAGTGCTTCCTCGACGTCGTCGTTAGCGACTCCGAAAAAGTCTCGTGGCGCCGGAGAAGAGGAGGATGACCTTACGCAAGGAATGGAGGATCCGCCGGCAGAACCTCGGATCGTAGAAGTAGTCGCTACACCTGCAAATCCACCGGTTACAGGTCAAGGGAACGCTCCGACCAGCGGTGCTACCGTAACAACTACGGGAAGCAAGAAACAGGATAACGAACTGCAACCATTAAAGTCTGGCAACATGGCAGATCTGGATGAGCCGATGGAAGGCGACAAAGGAAGTTCTCAAAGTACTCAAGACAGAGAAGAACGAGATGCCAGCAAAGAAAGGGGCGATGGAAGCAAAGGCGATGAGCCAGAAGATAATGTAACAGAACAAACTCACCACATCGTCGTTCCCAGCTATTCTGCTTGGTTCGACTACAATTCGATTCATACCATTGAGAAGAGAGCTCTGTCGGAGTTTTTCAATGGTAAAAATAAGTCGAAAACGCCAGAAATCTATTTGGCGTACAGGAATTTTATGATCGATACCTACAGATTAAACCCAACAGAGTACATCACATCGACGGCTTGCAGGCGCAACCTGGCCGGCGATGTATGCGCGATTATGCGTGTACACGCGTTCTTGGAACAATGGGGACTTATCAATTACCAGGTGGATGCGGAGTCGAGACCAACACCTATGGGCCCACCGCCAACGTCGCATTTCCACGTACTGTCGGATACACCATCAGGTTTAGCCCCGGTAAATCCAAACCCGCCGAAAACACCGCAGCCATCGGCTGCGAAAACTTTGCTCGATCTAGAGAAGAAGTCGAGCGTGATGGGCTCGGAAGAAAAAGCTTCGGCCGGAGCGATGGCAAACTTTGGACTGAAGATAGATCAGTACTCGAGAAAACCAGCGGTTCTGAAGAACAAGCAAGCTGCCGGCGCAACCCGCGATTGGACGGAACAGGAGACATTGTTGTTGTTGGAGGGATTGGAGTTGCATAAGGATGATTGGAATAAAGTGTGCGAACATGTTGGCTCGAGAACCCAAGACGAGTGCATTTTACATTTCTTACGACTTCCGATAGAGGATCCGTATTTGGAGGAAGGGGGACCAGAAGGTTTGGGTCCTTTGGCTTACCAACCGGTACCCTTCTCAAAGGCAGGCAATCCAGTAATGAGTACAGTCGCGTTTTTGGCTTCCGTCGTCGATCCCAGAGTGGCGGCTAGTGCTGCGAAAGCTGCCATGGAGGAATTTGCCGCTATCAAGGATCAAGTGCCGGCCGCTTTGCTGGACCAACATCTCAGAAACGTGCAAGCCAGCGCAAACTCGGACGGCAAGTTTGATCCAGCTGCGGGCTTGGCTCAATCGGGTATAGCTGGTACAGGTCCGCCCGAACCCCCCGACGACACAGCAACACCGTCGACTACCGGAAGCGTACCGACAACAGTTGCTACCTCACCGCATTCGGCCACATCGACGCCAATAGAAACAAAGAAGGAAGAACAGGAAAAACCGAAAGAGTCAGAAGTTGAGCAAACTCAGTTGGAAATTGGAAAGAAAGAGGATGAAATGAAGGAATCGGAGGAGGACACGAAAACGCCCGTGGACGTCGAAGCTATGGAAGCAAAGGAGAAAAAGGATAAGGTGGTACGAGATGCTCAATTGCAGTCCGCAGCTGCCGCTGCATTAGCGGCAGCTGCTGTTAAAGCGAAGCATTTGGCTGCCGTGGAAGAACGCAAAATCAAATCGTTGGTGGCGTTGCTCGTTGAAACGCAAATGAAAAAATTGGAAATTAAATTGCGACATTTCGAAGAGTTGGAAACCACGATGGAAAGAGAACGCGAAGGTCTCGAGTATCAGAGGCAACAGCTGATCACGGAGAGGCAACAGTTCCACTTGGAACAATTGAAAGCTGCTGaatttcgagcgaggcaacaagcgcaccaacgtttagctcaagaacagcagcagcagcagcaacagcaacagcagcaacaacaacaacaacagaatcaaCATCCACCTTGGCAACCTGCCGCGCAACAACAACAACAGCAACAACAACCACCGAGTCCTCAGGCATCGGCACAGCAACCAGCAGCTCATACGCCCCCGCAACAGGCGTAA
Protein Sequence: MLALGPKKDGGPNAKFFESQEILTQLDGVKQWLLKNCKKYVQTDPPTNKSLATLIVQLLQFQEDNLGKNVSKPPMTRLPIKCFLDFKPGGGLCHILATAFRIKQEQGWRRFDFPVGKSGSRMDRTVEMFVAAERALVQNRCFTVPNIYVRADVDKSTAAKVKEAVRRHQGTIAENEADATHIIYPSVDPMEEEYARPCMRRERSVLLHWYYFPDSYDSWTSLDLPWDFPEGTVANTSVKSVYKVSATWALDLDQYNEWMNEEDYEIDENGQKKIHKYRLSVEDLMAQPSHPPPSAKKPKRKRSPSPPPKPGKRKSARAPSSVQSASSTSSLATPKKSRGAGEEEDDLTQGMEDPPAEPRIVEVVATPANPPVTGQGNAPTSGATVTTTGSKKQDNELQPLKSGNMADLDEPMEGDKGSSQSTQDREERDASKERGDGSKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKTLLDLEKKSSVMGSEEKASAGAMANFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPVPFSKAGNPVMSTVAFLASVVDPRVAASAAKAAMEEFAAIKDQVPAALLDQHLRNVQASANSDGKFDPAAGLAQSGIAGTGPPEPPDDTATPSTTGSVPTTVATSPHSATSTPIETKKEEQEKPKESEVEQTQLEIGKKEDEMKESEEDTKTPVDVEAMEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLAQEQQQQQQQQQQQQQQQQNQHPPWQPAAQQQQQQQQPPSPQASAQQPAAHTPPQQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01473111;
90% Identity: iTF_00219042; iTF_01417634; iTF_00229283; iTF_00230627; iTF_00224484; iTF_00863204; iTF_01068228; iTF_00227205; iTF_00229958; iTF_00233158; iTF_00221193; iTF_00214954; iTF_00218346; iTF_01066186; iTF_01068906; iTF_01418282; iTF_00217003; iTF_00223116; iTF_00982220; iTF_00219726; iTF_00231918; iTF_00861070; iTF_00863886; iTF_01539534; iTF_00225167; iTF_00228591; iTF_00231247; iTF_01420207; iTF_00183216; iTF_00217681; iTF_00965969; iTF_01070961; iTF_01418929; iTF_00675954; iTF_00982898; iTF_01419570; iTF_00222451; iTF_00225843; iTF_00227892; iTF_00762485; iTF_00215639; iTF_01066872; iTF_01067544; iTF_01070296; iTF_00214329; iTF_00221849; iTF_00864569; iTF_01069593; iTF_00223804; iTF_00763164; iTF_00216317; iTF_00226525; iTF_00232542; iTF_00860318; iTF_00865246; iTF_00220511; iTF_00183872; iTF_01420864; iTF_00684097; iTF_00962436; iTF_00963787; iTF_00963120; iTF_00964409; iTF_00961756; iTF_00087077; iTF_00085289; iTF_00086159; iTF_00087921; iTF_00084478; iTF_00088734; iTF_01169098; iTF_00861805; iTF_00865936; iTF_01122997; iTF_00684728; iTF_01122364; iTF_01065501;
80% Identity: -