Basic Information

Gene Symbol
NCOR2
Assembly
GCA_028453745.1
Location
CM052098.1:13270981-13276286[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.5e-16 1e-12 48.6 0.4 3 45 172 214 170 215 0.95

Sequence Information

Coding Sequence
ATGATACGAACTATCTCGCATACCCGCGCGTTTCACGAGGTACCGGTGTATCCTGGAAAATTTAGTTTATACGAAGGTAGCAGACAGATCGGACCCCACGCCTGCACGGTCTGTCAAAATGTGGTCGAGGGTTGCGCGCAAAGTCGAGCTCTGCCAAGAAGTCAGGCGGCTCAGTACGGGTTGCGAGAGGATCAAGTGGCGGCCGGTGCTCGTGTCTGCAACACCTGCAGGTGCAAAGCGGTCAGGGGACGATACACCTCGTGTCCTTTACCTGGTTGCCCGAACGTGAACAATGCCAGCTCGAAGACCAGAGTGAAACGGTTGAGAGCGCTGCCTGCCAAATGGCTCGATCTACCTACAGAGATTCGTGACCCGATCATCCAGGAGTTCCAAATACCTAGCAACGCGACCAAATGCTGTTCCGCCTGCTTCAACCGAATATCCCGACGTCTAACACCCCATCTGACCGGCAGCGCCGAGGTCGCTGAAAACATGGCCGATTCCATGGCCCGGCAATGGACGGACGAGGAACTCGAGCTACTCCGGAGAGCGCTCAGAGAACATGGCACCAACTGGTTGAAGGTCGCCGAGCAAGTCCCTGGAAAAACGAATCATCAATGCAAGAACTACTATTTTGCGTACCGGAAGAAACTCAGCTTGGACCAAATGGTCGCCGAGTATTATCAGTCCTTGGGCGAAGAGAGGAGACCTTGTTTGACCGACGAAGAAGAGAGCGGTAGCAGTACGAGCAGCTGCGACGAGCTAGCGGTTCACGACTCGAGCGACACGGCTAGCGCGGGTAGTCCAGCGAATAACATGTCGAGCGGAACTCCAGGAACACCAGGTTCTTCTACGACATTGCCTATGTCTTTCTCACGATTGACGGATCAAAAGCTTGGCGACAAGCTGGCAGACATTGCTGTGGTATCTTTAGTGCCACCGGTGAGCATAGGTTCGTCGCAACAGTCTTCCGCCAGCGGAGGTAGCAACGCTGCTTCGGCTGGTACTAGAGAAGACTACGATAGCTCGGCCACGGAGACGGCGGACGAGGGTCAGGGAGGTGCCGATTTGGACAATAGCAGCGTCGTTGTGACATTAACTACTGCTAACAACTCGACGCCGCTTCAACAACAACAACAACAACAACAGCAGCAGCAGCAACAGCAACAACACCAACAACAGCACCAGCAGATGCCACCGGCTTCGCATTCGCCTCCGTCGACCACCAGCAACTCGAACCCGCTTACCGTTAAAGACCTTATGCTTGGTGTCATCGAGATGCAGCTGAAACGCAATCCTAACAGCCCAGCTGGCACCGGCGGTTCCTCGGTGCCGATCAATTCCGGAACGCCAACGATATCGAGCATACTGAAGACGGATCATCGGAACGACATTACTTTCGTCAGAGAGTACAAACCGTCGAGTTCCATGGCGAACACGACCATGTCCAGGGACTCGAATTTGGCGACTCTGTCGGTGGTGTCGGGTCCCCATCACGTACATCGGTCTGCACCTAGTCCTCAACAACTTGGCCAAATGCAAGCAACAATCACCCCCTGTCCTCCAGCGGCGTCGAGCAGTCAGTCCTCCTCCTCGGACCTGATACCAAAGGAAGGGCTGATCGTGATGCAAGTTCAACAAGCGCATCGAGAGACAGAAGGCACCCTCGACCTGAGTATTAAGAAACCAAGGCAACAACAAGAATATAATCATTCCTTGCAACCGCTTCATAAGCCACCAACGGTTGCCCTTTATCGGCCAGAACCACCTCCAGGTGCTTACTACCATCCTCACGCTCATCCGGAGCAAAGTCGAGGCGCGAAGAGTCCATTGGTTTACGCTTCTTCGCCACGGCCACAAGCACCTCTCACACCGAAAATGAACAAAGTCACCGTGCCACCGCCGCATCCGAAATTGTCCCCTAAATTGAGCACCATAGGCACGCCTGGACACAAGAGCGGCTCGATTACGCACGGTACGCCGGTTTCCAGTGCCCGTTACGACGGTCTTCTCAGACAAATGACGCCTCCAGGAAATCCAGGCAACGCTGCTGGCACATCGAACGTTGCCAGTGGCGCGAGCGCGGTGAACGCTCCTAGTAATCAGGGACCGAAGGAGACGGGTTCGATAACTCAAGGCACACCGGTTCATCCGTTTGCGGTGGACAAGCGAGCGCCTATGTACGACTATCATAGACCGATCAGACATTCGCCCGTAACGACAGGCAACATTCCTGGACAGGGACAGAGTCAAACAGGAACGGCGACGGTGGTAGTGACGCATAGCAATCAATACAATTCTTATTCCGCTCGACCGCCCAGCTACACAATGGAACAACAGTTATCCTCGCGACAGATTATCATGAACGACTATATAACCAGCCAACAAATGCACGCGCGTAGTCGGAGCAGTGCCACGTCAGAAGGGAACAACAAGAACGAACCGCCGTCGACGTTGTACTATACAAGCACACCTCCACCGCAGTCGCATACGCAGCCGCGGCAAGGAGTGATCCAGAGGCATAATCCTCAGAAACAGATGCATTATCCACCTCCGCCACCGGGACTGGAAGCTTTTTCCAGTTTAGTGGACGTTGCCGTGCAACAACCCAGTCTTCCAGTTCCCCATCCACACAGCCATCCCGCCTCTGTTAGCAGCAGTCACGAGGGTCTTGGGAAAACCATGGCGGACAGGCTGCTGGCCGACCGCTACGGAGACAAACATCGCTTGGCCATGCACCAAGCGGATCACAGAATGGCGGTTGCCCATCATCACCAACGAGACAGAGAAAGAGAACGCGATTTGGTTCATCTGCGCGAGAAAGAGGAATATAGATTGCAACGAGAGAAAGAGATTCAGCAGCAGGAACACAGACTGGCTCAGCAGAGAGAAAAGGACGCGCAACACGCCGAGCACAGGCTGTCGATGCAGCAAAGGGAAAAGGATATACAGCACACCGATCACCGTCTTACCGTCCATCAACAGAGAGAAAAGGAAATCCACCAACAGATGGCCGCAGCCGCTGCTCAGCGAGAGAAGGAACATCAGGAGCATCGATTGGCCGTACAACAGCAGAGGGAAAGAGATATGCATCTGCAGCAGCAACAGCAGCAACAGCAACAGCTTCAGCAGCACATACATCAACAACAGAGAATGGAGGCTGAGAGGAGGCATATAGCTCAAATGTATAGAGACCAACAGCAACAACAGCTCGACAGGGACGCCAGTAGGTTGATGAGCACTGGATTCACCCAATCCTCGAGGCTCCAGCAACCCCAACAGTCTCAACAACAACAACAACAGCAGCAACAACAGCAGCAACAATCGTCCTCTCGACAGAGTCAATCCTCGAGCCAGCAACAGAACGAATCAGCGTCTACTTTAACAGCTGCCAGCTTGATAGATGCTATCATAACTCACCAAATTAATCAGAGCGTGGATAACACTGGCGGAAATTCGCAACCTCAACGACCAGGCGATCGTCTTTTCCAGGTATGTCGGAATTTCCCTGGCAAACCTTTGGACACTTTTTCTTTGTCTACAGGGTGGGACATTTGA
Protein Sequence
MIRTISHTRAFHEVPVYPGKFSLYEGSRQIGPHACTVCQNVVEGCAQSRALPRSQAAQYGLREDQVAAGARVCNTCRCKAVRGRYTSCPLPGCPNVNNASSKTRVKRLRALPAKWLDLPTEIRDPIIQEFQIPSNATKCCSACFNRISRRLTPHLTGSAEVAENMADSMARQWTDEELELLRRALREHGTNWLKVAEQVPGKTNHQCKNYYFAYRKKLSLDQMVAEYYQSLGEERRPCLTDEEESGSSTSSCDELAVHDSSDTASAGSPANNMSSGTPGTPGSSTTLPMSFSRLTDQKLGDKLADIAVVSLVPPVSIGSSQQSSASGGSNAASAGTREDYDSSATETADEGQGGADLDNSSVVVTLTTANNSTPLQQQQQQQQQQQQQQQHQQQHQQMPPASHSPPSTTSNSNPLTVKDLMLGVIEMQLKRNPNSPAGTGGSSVPINSGTPTISSILKTDHRNDITFVREYKPSSSMANTTMSRDSNLATLSVVSGPHHVHRSAPSPQQLGQMQATITPCPPAASSSQSSSSDLIPKEGLIVMQVQQAHRETEGTLDLSIKKPRQQQEYNHSLQPLHKPPTVALYRPEPPPGAYYHPHAHPEQSRGAKSPLVYASSPRPQAPLTPKMNKVTVPPPHPKLSPKLSTIGTPGHKSGSITHGTPVSSARYDGLLRQMTPPGNPGNAAGTSNVASGASAVNAPSNQGPKETGSITQGTPVHPFAVDKRAPMYDYHRPIRHSPVTTGNIPGQGQSQTGTATVVVTHSNQYNSYSARPPSYTMEQQLSSRQIIMNDYITSQQMHARSRSSATSEGNNKNEPPSTLYYTSTPPPQSHTQPRQGVIQRHNPQKQMHYPPPPPGLEAFSSLVDVAVQQPSLPVPHPHSHPASVSSSHEGLGKTMADRLLADRYGDKHRLAMHQADHRMAVAHHHQRDRERERDLVHLREKEEYRLQREKEIQQQEHRLAQQREKDAQHAEHRLSMQQREKDIQHTDHRLTVHQQREKEIHQQMAAAAAQREKEHQEHRLAVQQQRERDMHLQQQQQQQQQLQQHIHQQQRMEAERRHIAQMYRDQQQQQLDRDASRLMSTGFTQSSRLQQPQQSQQQQQQQQQQQQQSSSRQSQSSSQQQNESASTLTAASLIDAIITHQINQSVDNTGGNSQPQRPGDRLFQVCRNFPGKPLDTFSLSTGWDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00219041;
90% Identity
iTF_00860317;
80% Identity
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