Avir025713.1
Basic Information
- Insect
- Agapostemon virescens
- Gene Symbol
- F54F2.9
- Assembly
- GCA_028453745.1
- Location
- CM052084.1:10331757-10333852[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.9e-06 0.0094 16.8 0.0 3 38 294 332 292 334 0.83 2 2 2.4e-10 3.8e-07 30.9 0.1 2 45 373 421 372 422 0.91
Sequence Information
- Coding Sequence
- ATGAGATTGTCATTGCTGTTTCTCGGTGTTTTCTCTTTCCTCGATCTGTACAAATTCACGAACGCTTGGGACAATGACGAGCTCGAGGTGTTCGACGTCGTCGAAGAAGTCAATCAAAACTTTTACGAGGTCCTCGGCGTCTCGCAGACTGCAAATGCGTCGGAAATTAAAAAGGCATTCAGGCGGCTGTCCCTGCAGCTGCACCCTGACAAAAACCCAGCGGAAGATGCAGAGCAGCAGTTCAGAAAGCTAGTTGCAGTGTACGATGTACTGAAGGACTCAGGAAAGCGGCAACGCTATGACAACGTGCTGGTCAATGGCCTGCCAAATTGGCGGTCAGCTGTATATTATTACCGCCATGTGCGGAAGATGGGGCTCTTAGAATTAAGTGTAATTTTATTCTTAGTGTTTACGGTTGGACAATATCTGGTAGCCTGGGGTGCATATTTTGAGAAGAGATATACATATGAGCAAGTATTAGGCAGTAAGCTCCAAAAGATGCAGAAGAAGAATAAAAAGGGTAAAATGGATGTACCGGACCTAGCAGATATTTTGGAGAAGATTCCCACGCCGAGCATTTGGAATACTCTTCCATTCCAGTTTCCGAAATGGATTGTAAATTTTACGTTGTCCATACCGAGCATCGTGCGTGCAATGTATAATATGTTAGAGGAGCGAAAACGTAGGAAAAAGGAAGAAGAGGAGGCACTAGCACAAGAGAACGAGCAACAAGAACCAGAGCCGGTGCCTCGAACTAGAAGAAGGAGACCTGGTTTCACTCCGCAAGAAAGAAGCAGTAACAATTACAAAGAAGTCACGAAGAAGCCTAGCGAGCAGACTAATCACGTCTATCAGAAGCCTGCTCCGTCTAGCGGAGGATTATGGGTCGACGATGATATTTGGGAGCTGATCAAGCTCGTGAAGAAATATCCCAGCGGGACACCAGAGCGATGGGATAAAATTGCGGAAGCTATGAACCGCACGGTTGCCGATGTAACGTACATGGCGAAGAAGGTGAAAGACGAAGGCTTGAAGCCCAACTCCATGTCGGAGGAGCCTGTGGTTGAAGATCGTCGGAAAAAGGTAAAAACGCGCGTCGAGAACGTGGAGTACATGGGCGATTGGAGTCAAGAGCAACAGAAGGCATTTGAAGCTGCTCTCATTAAATATCCGAAGGGCGCATCTGTAGATAGGTGGGAAAAGATAGCGAACTGTGTCGAAGGGAAAACAAAGGATGACTGCCAAGTGAGGTATAGGCAATTGGTGGAGTTAGTGAAGAAGAAGCAACAAACTCAGTAG
- Protein Sequence
- MRLSLLFLGVFSFLDLYKFTNAWDNDELEVFDVVEEVNQNFYEVLGVSQTANASEIKKAFRRLSLQLHPDKNPAEDAEQQFRKLVAVYDVLKDSGKRQRYDNVLVNGLPNWRSAVYYYRHVRKMGLLELSVILFLVFTVGQYLVAWGAYFEKRYTYEQVLGSKLQKMQKKNKKGKMDVPDLADILEKIPTPSIWNTLPFQFPKWIVNFTLSIPSIVRAMYNMLEERKRRKKEEEEALAQENEQQEPEPVPRTRRRRPGFTPQERSSNNYKEVTKKPSEQTNHVYQKPAPSSGGLWVDDDIWELIKLVKKYPSGTPERWDKIAEAMNRTVADVTYMAKKVKDEGLKPNSMSEEPVVEDRRKKVKTRVENVEYMGDWSQEQQKAFEAALIKYPKGASVDRWEKIANCVEGKTKDDCQVRYRQLVELVKKKQQTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00302959;
- 90% Identity
- iTF_00183870;
- 80% Identity
- -