Avir032124.1
Basic Information
- Insect
- Agapostemon virescens
- Gene Symbol
- V-MYB_1
- Assembly
- GCA_028453745.1
- Location
- JAQQRL010017384.1:1-2491[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-18 1.5e-14 54.6 1.1 7 46 93 133 92 133 0.98 2 2 3.4e-21 5.4e-18 65.6 0.2 1 44 139 182 139 184 0.96
Sequence Information
- Coding Sequence
- ATGAATTACACCAGCGTTCCGGTAAAAGGCAACCGTCGATTCCCTCGTGTCGCAGTTGTTTTGAAGTTGAAATTTGTGGCCCTTCTCGGCCTCGTGATCCTGTGTATGGCCGGTACTGTACGCCTACACGTTGGGCCGGGCAGAAAAGAAACGAGCGAAAACGCTCTCCACGGTCGCCTCGGTGGGGTATGCAATAAGAAAAAGAGAGGGCCTGGAGCCGCGGAGATGCTGCGTCGTCGTCGTCGCCGTGCCAATGCACTTGGCAACAGCCAAGGGCAAGAGGACGAAAAAGTGGTAGAATTGGTGGAGCGATACGGGCCGAAGAAGTGGACGTTAATTGCACGGCATCTGAAGGGTCGTATCGGTAAGCAGTGCCGGGAACGATGGCACAACCACCTGAACCCGGGGATCAAGAAGACGGCGTGGACGGAGGCGGAAGATAGGATCATCGTGGAGGCTCACCGCACGGTGGGCAATCAGTGGGCGAAAATCGCGAAATTGCTGCCCGGAAGGACGGACAATGCGATTAAGAACCACTGGAACAGCACGATGAGGAGAAAGTACGAGGCGGAAGAAGGGAGATCCGCCACCGAGACCAGAG
- Protein Sequence
- MNYTSVPVKGNRRFPRVAVVLKLKFVALLGLVILCMAGTVRLHVGPGRKETSENALHGRLGGVCNKKKRGPGAAEMLRRRRRRANALGNSQGQEDEKVVELVERYGPKKWTLIARHLKGRIGKQCRERWHNHLNPGIKKTAWTEAEDRIIVEAHRTVGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEAEEGRSATETR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -