Avir023481.1
Basic Information
- Insect
- Agapostemon virescens
- Gene Symbol
- SNAPC4_1
- Assembly
- GCA_028453745.1
- Location
- CM052096.1:34221-37028[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 4.3 6.9e+03 -2.0 0.0 3 17 165 179 164 180 0.89 2 5 1.9e-12 2.9e-09 37.6 0.6 1 45 265 311 265 312 0.96 3 5 2.7e-08 4.3e-05 24.3 0.6 4 43 322 365 321 368 0.96 4 5 2.7e-14 4.3e-11 43.5 0.0 1 45 374 419 374 420 0.97 5 5 1.9e-10 3e-07 31.2 0.1 3 41 429 467 427 469 0.88
Sequence Information
- Coding Sequence
- ATGGATAAGCCAATGGACAACGATGATTTGGAAAAAGCTCTGTTACTAGAAAACGCTTCTTCCAAACGAAAAAGCGAGTACGATTTTCCAAGTACTTCTTCAGTGGAAAAATCAGTAACGGTCGGTAAGTCGCAAGTGTTTTCAAAAGATTCTACGTTTCAAAAGAAATCAGAATATAGAAAGGAAAATATGCTTTCGGAATGTAATATCAATGATTGCAATAACTTATTGGATTTCAACAAGCAGATCGTTTCTCTATTGCTCGATTTAAAAAAACACATAACCTATGCTCTTGAAAAATGTGAAACGAAATTGACAGTGATAGAGTCGAGCCTTGAAAAACATGTAACCGGAGATACAAGAGCTTTAATTTGCAATGCCGGTATGCCATATTTTAAGGATAGGAATCATTTTTTTGCTCCTAACAACGACGACGAAACGTTGAAAGAAAATTGTAGAGAATTACATCTCAGGAATCTTCCTAAAGTAGCTCCTTGGACGATCAAAGAAAGGAATACGTTATTTAAAGTAATACAGGAAGAAACTGCCACAGCTTCTAACAAGATCGAATGTGTCGGACTTGACGAATCGGCGCACGAGCCTGGATCAAAACTCAATGAAAATATGAAAATGAGAAAGAGATTATCGGCCAACGACTATGAGAAACTGGTTGTCCCATTGGAAGAAAAAGATTTTGATTGGTTCAAAATATCGTCTATTTATTTCGAGGAGGTGCACTCGCCGCTCGATTGTCGAGTCATGTGGAATGTTTTTCTTCATCCTAGGATTAATAAAAACTCCTGGACAAAGTCAGAAGACGACAAATTGAAAGAAACCACAAAGAAGTACAAATTTCAGAATTGGGACAAAATTGCGGCTGAGTTGAATACAAATCGATCTGCTTACCAATGTTTCATCAGATATAATACAATAAGGAAATTGCAGAAAGTTAGAAATTTCATATGGAAACACAGAGAGGATGATAAACTCTTAAAATTAGTCAAAATTTTCCAGATCGGCGACTTTATTCCTTGGGGTGAAATAGCTAGTTGGATGCAAAATAGAACTAAACAACAAGTGTATTTTCGATGGACTTATAGTTTGGCGCCATATCTGACTAAAGGCAGATTTAGCAAATCCGAGGATAATCTTTTAAAAGACGCAGTTGCTAAATACGGTACAAATTTTCGTAAAATATCAGCCGCACTAATGCCCAACAGATCAACAGTCCAACTTCATGATCACTATCAAACATTGACCAACAGTCAAATAAAAAATTCGAATGTATGGTCGCTAGAAGAAGATTCAAAACTGTTGGAACTTTTCGAACGATATGGTCCAGATTGGTCCAGAATAGCTAAAACATTTACATGTAAAACAAGAACGAAGTTGCGACACCGGTGTGCCGCTTTACAAAGGTATATTAATAAAGGTGTATCCATTCGTGATTTGCACATGGATTACGTAAAGTACAAGAACAACAGAATAGAACAGAGAAAGAGAAGCGAAGGATCTGATCAATCGAAACAATCAAATCAAATACATTGCTTTAACAAAGGTGTGCCGAATAAGGATCACAATGACTATAATGACGACATTGATAAGGAATTGATTAAGTATTTCCATACAGAAGAAACGACAGAAAAATCGCGTTATCCCGCACAACAACATTATACGTCGGACGAACTCGAGCACAATGCAAAAAAATTATATAATATTTTACAGCAATTAAATGCTGAACTTTGTATTCCCGACGATGCATTTAACAATTCAATGTTACACAACAGGCACAGACAGCTTCTGTGTTCGTTAAAGGAACATATAGATGTGAAAAACAACAAGAAGAGACAACAAATGTTAATGGATAAGTATAGTTTGCTCATGTTTGGCGTAAATCACAACAATGTGGTGAAAAGAGCTTCTGACGATACATTACCATGCTCTTTTCAATCAGAGATGAAATTTGAATTTCCAAATAGAACAGGATGCATAGATTATCATGTGAACACAAAGAGTACCTTTTTAGTCGAGAAAACGATAGTCTTTGATACTCCAGACTTTGTGATATCTCATATTGGTGGCAACAAGCAACAATTAGAATTTGAGAAGGTTGCTCGTCTGCTCGTGCAGAATAGTAGTTCAAGAAATGAACAGTCCCTGGGAACCATTAAAGGTAGAGGCTTTTACGCAATTCCGTCTGCGATGTCTTTGGATCAAAACTACTTAGCTGCCAGCAGCAGGGATAACGACAATGGAAGCAGAATGGAAGCAAGTACCGAGTCTACAAACATAATGATGACCGATGATTCAAAAGATTCGAAAAATTTCAATATTCGTGATCGCATAAACCGTTCAACATTGTGGTCGCAAAACGAAAATACTACGAGAAATATTACGTTGTTCAACGCATTCGAAACGATACACGAGTTTGTATCTGCTTCCCCCGTGGAAACATCCAAAGACCAATACATACCCGCAATCGAAACTACACACTCAACTTTATTCAGTTTTAAGCATTTACTCGGTTTGAAACAGAGTTTCAACGAGGAACACAATAATCCATTGAAATGTCTCACGATGTCGACAAGATGTCAACGATCGTTCAATTTATTGGAAACGCGTTTAGAACAGTTATTTAAATATCCAATCGGTCTGTCGAGGACCACGTTGCCAGAAGTTTATGTTATGGATATCTTTTCTTACGACGATGTTACATCAAAAAGGAAAGCTTCCGAACCACCGACAATACCGAAATCATGTAAATCAAGAAAGTTTCCAATACTCGACAAGAACAACAAAAATAGCTAG
- Protein Sequence
- MDKPMDNDDLEKALLLENASSKRKSEYDFPSTSSVEKSVTVGKSQVFSKDSTFQKKSEYRKENMLSECNINDCNNLLDFNKQIVSLLLDLKKHITYALEKCETKLTVIESSLEKHVTGDTRALICNAGMPYFKDRNHFFAPNNDDETLKENCRELHLRNLPKVAPWTIKERNTLFKVIQEETATASNKIECVGLDESAHEPGSKLNENMKMRKRLSANDYEKLVVPLEEKDFDWFKISSIYFEEVHSPLDCRVMWNVFLHPRINKNSWTKSEDDKLKETTKKYKFQNWDKIAAELNTNRSAYQCFIRYNTIRKLQKVRNFIWKHREDDKLLKLVKIFQIGDFIPWGEIASWMQNRTKQQVYFRWTYSLAPYLTKGRFSKSEDNLLKDAVAKYGTNFRKISAALMPNRSTVQLHDHYQTLTNSQIKNSNVWSLEEDSKLLELFERYGPDWSRIAKTFTCKTRTKLRHRCAALQRYINKGVSIRDLHMDYVKYKNNRIEQRKRSEGSDQSKQSNQIHCFNKGVPNKDHNDYNDDIDKELIKYFHTEETTEKSRYPAQQHYTSDELEHNAKKLYNILQQLNAELCIPDDAFNNSMLHNRHRQLLCSLKEHIDVKNNKKRQQMLMDKYSLLMFGVNHNNVVKRASDDTLPCSFQSEMKFEFPNRTGCIDYHVNTKSTFLVEKTIVFDTPDFVISHIGGNKQQLEFEKVARLLVQNSSSRNEQSLGTIKGRGFYAIPSAMSLDQNYLAASSRDNDNGSRMEASTESTNIMMTDDSKDSKNFNIRDRINRSTLWSQNENTTRNITLFNAFETIHEFVSASPVETSKDQYIPAIETTHSTLFSFKHLLGLKQSFNEEHNNPLKCLTMSTRCQRSFNLLETRLEQLFKYPIGLSRTTLPEVYVMDIFSYDDVTSKRKASEPPTIPKSCKSRKFPILDKNNKNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -