Avir005116.1
Basic Information
- Insect
- Agapostemon virescens
- Gene Symbol
- -
- Assembly
- GCA_028453745.1
- Location
- CM052082.1:16822020-16825388[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 2.8e+03 -0.9 0.4 17 35 332 350 325 358 0.69 2 2 2.7e-09 3.9e-06 27.5 7.9 3 62 352 411 350 413 0.94
Sequence Information
- Coding Sequence
- ATGGACACAGTCCCATTGTTAACCCCAACTATGGAGACAGAATTATTAAAAGATCCATGGACCTTTCCACAGTTCAAGACGGATCAGATAAAAGAGGAGGAGAAAACAGCGTGTTCCATATGGGAGGAAAACTTTCAGGATTTAAGCGGCTGGTGCATGGAGACGTTCCAGGCTCATTGCGATTTTCCTACAGGTGAATCACCTGCCTTTAAGCTATCAGGTACGAAATACGAGGGTAACAGTGCTTTGTCTTCAGAAGAGGGGGTATTGAAAGATTTGATAGGTGTAGCGGATGAGGAGAGATGTAACGTAAAAATGAATAGTGCTGAGACAACCAATTATTTCACCAACAACAGTCACAGCTTACAAACCACACCGAAACTAACAGCTAGCAAATGCGCGGAGGAGGATAACAGTACCGCAGACTCAACCACGTTGTCGGACTGGTTGAAGCTACCGAGAGGACCAACGGCGTCCAGCACGAGTACAAGCACATGTACAAGTCCGTATAACAAACAGAATAACGCAACGATCATCGGCACGCCATCATTCGAACCTAAATACCAAGTAGAAGAGATTTATCTGGATGAGGCTTGTCCGACTTCGATCGACTCTGAGAAACAACGCGAGACGTGGGATATGCTGCGTACAGTTGAAACCACTGGCTCAGAGACCTTCGACTTGTTGTCATACCTGTGCGACGATGATATGCGTTCGCCAGAGGGTAGTGTGTCCACGGATTCGTCCTCGGTGGTATCGAAACCATGGTCGATCGCGGACTCATCGAAAAATATTCCTCAGTCGTACGGCCGGGGAGAGGCAGAGAATACGAAACCGTTGGTCGAGATGTGCACAAGGAATCGAGCAGCATCGACAGCTACATCATCGTCGTCTATGGACACCACCATCGTATCATCTCGGAAGTCGCAGAGGCTGAGGTCGTCGGCGGAGAAGACGTACCACAAAGTGGACAAGAGCCACAACAGGATAGCGAGGCGGGAGAAATCTGCGAGGAGGCGTTGCACCGATGCATTGGAGGATCGTGTGTTTACATTGCACTATCGCGAGTCCAGGGAGAAAAACAATGAGGCGTCGAGGAAGTCGCGGATAAACAAGAAAGTGAAAGAGTCGGAGATGTCGACGAAAGCGATCGAACTCGAACGGGACAACAGGATATTGAAGATGAAGGTCGAGGAGCTCGAGAAACTCGTCACGTCGATGCGCAGCGCGTTGCTGAGATCTGCTATGAAGAAGGAATTCTAA
- Protein Sequence
- MDTVPLLTPTMETELLKDPWTFPQFKTDQIKEEEKTACSIWEENFQDLSGWCMETFQAHCDFPTGESPAFKLSGTKYEGNSALSSEEGVLKDLIGVADEERCNVKMNSAETTNYFTNNSHSLQTTPKLTASKCAEEDNSTADSTTLSDWLKLPRGPTASSTSTSTCTSPYNKQNNATIIGTPSFEPKYQVEEIYLDEACPTSIDSEKQRETWDMLRTVETTGSETFDLLSYLCDDDMRSPEGSVSTDSSSVVSKPWSIADSSKNIPQSYGRGEAENTKPLVEMCTRNRAASTATSSSSMDTTIVSSRKSQRLRSSAEKTYHKVDKSHNRIARREKSARRRCTDALEDRVFTLHYRESREKNNEASRKSRINKKVKESEMSTKAIELERDNRILKMKVEELEKLVTSMRSALLRSAMKKEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00763008;
- 90% Identity
- -
- 80% Identity
- -