Avir026578.1
Basic Information
- Insect
- Agapostemon virescens
- Gene Symbol
- Atf3_1
- Assembly
- GCA_028453745.1
- Location
- CM052095.1:9400332-9412037[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8 9.8e+03 -2.6 4.6 4 14 77 87 75 102 0.65 2 2 3.8e-16 5.4e-13 49.5 12.8 2 63 210 271 209 273 0.96
Sequence Information
- Coding Sequence
- ATGCCATCCAACTTGCTTCAACAGCAAAATGCTACCAAAACCAGTCCCAACTCCTCGCCCAAATTTCTTCACCATCTTCATCCTCAAAGACAATTTCTAAAAACTCTTAAATCGCAACATAAGTCCTCAAAAACCATAAAAACCATCACAACGTCAGGAAAAACGAACGAAAAATGGCCGACCATCGAGGAGGAAGGACAACAGAAGACTCTTCGACAGCAACCGCCAAAAAATCGCAAAACGCGTCGAAGAAACCGAGCAGAGGAATCGGCTAGGACAAAATATGGTCGGTTGTCGAGGAGGAAGGACAACGACGACGACGCCGTGTGCACGGAGGAAGGAGAACGCGAAGAAGAGGCGTCGTTGGAGACGAAAGAGGAGGAGAGAGAAGCAGCTTGCGCAACCGGTGACCATCTGGCCAGAAAGCTTTTATCGTGCTTTTTCGGTACGGTCGTCGACATAAGCGTGGGCGGCCTAATTCCTGCGGCTGTCGTTTCTGCAACGTACTGGTCCGATCGCCAACAGAGGAACAATTCTCCCCGCCGGCGTCCATCGGAATCCCATGAAGACTCCCACGAAACACCGTGCACCGATCGCCATTTTACGAGCCAGCTGACACCGGAGGATGAGGAGAGGCGTCGAAGGAGACGCGAGAGGAATAAAATCGCTGCCACAAAGTGTCGTTTGAAGAAACGTGAGAAGACGGTGATCCTGGTCCAGGAGTCTGAGATCCTGGAAACGCAGAACCACGACCTGAAGTCCCAGATCCAGGAGCTGGAGACGCAAAGGCGTAGGCTTGTGGACATGCTGAGCCTCCACGGGCCCTCCTGTTTGAAACAGGGTGGCACGGACAACTCGTACCAGCAGTACGCAGAGCCATTGCACCTGCCTAGTTACCAGGAGAACTTTGTGCATCCTCCTCCGGCATTGAACCAGCCTCAGAACTGCGTGACGGATTACCCGGTGAAGCTGGAAGACTACGAAGGAGAATTCTACAGGCAGGAGAGTCCGTACGTGCCAACCTCAGACGCCAGTTGCACAGTGTAG
- Protein Sequence
- MPSNLLQQQNATKTSPNSSPKFLHHLHPQRQFLKTLKSQHKSSKTIKTITTSGKTNEKWPTIEEEGQQKTLRQQPPKNRKTRRRNRAEESARTKYGRLSRRKDNDDDAVCTEEGEREEEASLETKEEEREAACATGDHLARKLLSCFFGTVVDISVGGLIPAAVVSATYWSDRQQRNNSPRRRPSESHEDSHETPCTDRHFTSQLTPEDEERRRRRRERNKIAATKCRLKKREKTVILVQESEILETQNHDLKSQIQELETQRRRLVDMLSLHGPSCLKQGGTDNSYQQYAEPLHLPSYQENFVHPPPALNQPQNCVTDYPVKLEDYEGEFYRQESPYVPTSDASCTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -