Avir017803.1
Basic Information
- Insect
- Agapostemon virescens
- Gene Symbol
- cnc
- Assembly
- GCA_028453745.1
- Location
- CM052094.1:20268045-20271372[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.1e-17 1.3e-13 51.4 5.2 3 65 190 252 188 252 0.97
Sequence Information
- Coding Sequence
- ATGTCCTACGACTGCAGCTACTCCGTTTCCGGGCGAAATGGCGGATCTCCAAGATGTCAGACGGAACGCACTATGCCCCCGGTTGCCCAAAAAAAGCATCAAATGTTTGCAAAACGATATTTCCAAGAACAAGGTTCACCGCTCGGAGCCACAGCACACCCGACTACCCCGATGAAATACGAATACGATACGCATACAGTTGGTGCTGGAGCACCTGGAAACGCGTATTCGGGACCAATCGAGGGTGCAGCTGGACCACAACCCGAAATGAAATACAGCTGCAGCGTGGACTTTAGTCGACATCAATCAGGACGTTCTGCTATTGAACACATTCACCATAATCACACGTATCATTTACCTGCGGAAAGTTCTGGGTCCCTTCAACGTCCAGTTTCTCGTGACAAAAAAGTGCGTAAAAGCGAAGGCGAGGAACACCTGACAAGAGACGAGAAAAGGGCCAGGGCATTGAACGTGCCGATTCCAGTGAATGATATTATTAACTTACCTATGGACGAATTTAATGAACGTCTTAGTAAATATGATCTCAGCGAAGCTCAATTATCTTTGATACGTGACATAAGAAGACGGGGCAAGAATAAAGTTGCTGCTCAAAATTGCCGCAAACGCAAACTAGACCAAATCATTAGCCTTGCCGATGAAGTGAAGGAAATGAGAGACCGTAAAATGAGACTTATTCGCGAACACGAATTCATGCTTCTCGAGAGGCAACGCGTGAAGGATAAATTTAGCCAACTTTACCGTCATGTATTTCAATCTTTACGGGACCCTGATGGGAATCAATATCACCCATATGAATACAGCCTTCAACAGTCTGCAGATGGGAATGTGTTGTTAGTGCCAAGAAATCAGACAAATCCTCATCACCCGCGTTCCACAACAATGGAACCGAAAACGAAACCCAACCCAGAGCATAAGGAATGA
- Protein Sequence
- MSYDCSYSVSGRNGGSPRCQTERTMPPVAQKKHQMFAKRYFQEQGSPLGATAHPTTPMKYEYDTHTVGAGAPGNAYSGPIEGAAGPQPEMKYSCSVDFSRHQSGRSAIEHIHHNHTYHLPAESSGSLQRPVSRDKKVRKSEGEEHLTRDEKRARALNVPIPVNDIINLPMDEFNERLSKYDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQIISLADEVKEMRDRKMRLIREHEFMLLERQRVKDKFSQLYRHVFQSLRDPDGNQYHPYEYSLQQSADGNVLLVPRNQTNPHHPRSTTMEPKTKPNPEHKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01511948;
- 90% Identity
- iTF_01511948;
- 80% Identity
- -