Basic Information

Insect: Agapetus fuscipes
Gene Symbol: -
Assembly: GCA_951799405.1
Location: OX637336.1:2252530-2274933[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.1 73 4.6 1.2 3 23 139 160 138 160 0.89

2 16 5.5 3.8e+02 2.4 5.9 2 23 189 211 188 211 0.92

3 16 0.17 11 7.1 0.4 3 23 456 479 454 479 0.94

4 16 1.6 1.1e+02 4.1 0.1 3 23 519 539 518 539 0.97

5 16 0.52 35 5.6 0.2 1 23 587 610 587 610 0.89

6 16 0.0043 0.29 12.2 0.1 2 23 694 716 693 716 0.94

7 16 3 2e+02 3.2 0.3 1 23 724 747 724 747 0.89

8 16 0.00014 0.0092 16.9 0.9 1 23 753 776 753 776 0.94

9 16 0.00013 0.0089 16.9 1.6 1 23 783 805 783 805 0.98

10 16 9.2e-06 0.00063 20.6 2.7 1 23 810 832 810 832 0.96

11 16 0.0002 0.014 16.4 2.6 1 23 838 860 838 860 0.98

12 16 0.03 2 9.5 3.3 1 23 866 888 866 888 0.96

13 16 0.0024 0.16 13.0 4.8 2 21 895 914 895 916 0.95

14 16 0.2 14 6.9 0.9 3 23 924 946 922 946 0.93

15 16 3.3e-05 0.0023 18.8 3.2 1 23 953 975 953 975 0.97

16 16 0.011 0.78 10.8 1.1 2 23 982 1004 981 1004 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.1	73	4.6	1.2	3	23	139	160	138	160	0.89
2	16	5.5	3.8e+02	2.4	5.9	2	23	189	211	188	211	0.92
3	16	0.17	11	7.1	0.4	3	23	456	479	454	479	0.94
4	16	1.6	1.1e+02	4.1	0.1	3	23	519	539	518	539	0.97
5	16	0.52	35	5.6	0.2	1	23	587	610	587	610	0.89
6	16	0.0043	0.29	12.2	0.1	2	23	694	716	693	716	0.94
7	16	3	2e+02	3.2	0.3	1	23	724	747	724	747	0.89
8	16	0.00014	0.0092	16.9	0.9	1	23	753	776	753	776	0.94
9	16	0.00013	0.0089	16.9	1.6	1	23	783	805	783	805	0.98
10	16	9.2e-06	0.00063	20.6	2.7	1	23	810	832	810	832	0.96
11	16	0.0002	0.014	16.4	2.6	1	23	838	860	838	860	0.98
12	16	0.03	2	9.5	3.3	1	23	866	888	866	888	0.96
13	16	0.0024	0.16	13.0	4.8	2	21	895	914	895	916	0.95
14	16	0.2	14	6.9	0.9	3	23	924	946	922	946	0.93
15	16	3.3e-05	0.0023	18.8	3.2	1	23	953	975	953	975	0.97
16	16	0.011	0.78	10.8	1.1	2	23	982	1004	981	1004	0.96

Sequence Information

Coding Sequence: ATGACAGAGTTGGGGAGTGTCGGGTCTGAGGAGTCGGACAACGAGCCACTGTCTGTGCTGGCCGAGGACAAGCATGCGCCTCCTTATGGGGCCATGGAGCCTGGCGGCTTCCCGGAGCCCGAGGTGCTCTTGCAGACGGAGGGACTCTCCGAGCCCCTGGAGCTGAGCAGCCGGCCCCTGTTCACCAAGCTGTTCCAGCAGAAGAAGCGCTGGAGGAGGACGGAGGTGGTGAGCGTGCCGGACATCTGCCACCTGCAGCCCGAGCTGAACGCCATAGAGCAGGAGCACGTGCTGAGGAACTGCGCGCTGGCGGACACCTTCATCACGCACGTGCTGCCGCCCCTGGcgccccagcagcagcagcaggacCTGTGGCTGGACGTGAAGCCCCTCAGCCAGTCCGGGGCCATGGCCTGCCGCCTCTGCATGGAGTGCTTCGTGAACAAGAGCAAGCTGGTCATGCACTACGTGCTCAACCACAGCAAGGCCTACTGCGGCAACTGCAGGTACCTGCTGGACGAGGGGGAAGCGTGGAGCGTGCACTGGCGCCGCCACCTGCCCCTGCGCTGCTGCTACTGCCAGGAGGACTTCATGGAGGAGCGCCACCTGCGCACCCACTACACGCACGCGCACCAGCTCTCCCACTGCCGCATGTGCAACCTCATGCTGCCCGAGGGACCAGCCTACCAGAGCCATCTGCTCAAGAAGCACACCGTCACCATGGAGTCCTACGAGGAGAGAGACCTTGTGTGGGAAATCCTCAACCCCGCTACCTGGATGTTCTCCTGCCTCTTGTGCTACAAATATGATATTCCTCATTATGATTTCCTCCGACATTTCCTGTATCACCACAAATTCACGTTGAAGTGCTTGGCCAGTCTTGTGAATGGAAAGAAACTTGGGTTCACCGTCCTCGGAGCCAACTTGAGGAATGTGAATCCTGAGGGAGACGCTCCTCCGGAGCATCCGGCGCTAACTGAGCATTCCCCCAACAGGAATTTCCCCATCGGCGACGACCACATGGACTACCAGCTCATGGAAGCCTTGATTCCAGAAATCAAACAAGAAGTTCTGAGTGAGGATGAAAATGAAGGAAACCACCTGAGGATCTATCAAGAAAATCTGAATGTGAAGCATGAGGTTTTAGATCCCGGAAATGACATATCAATGACTTCAGAAAAGTTCCTAGTGAAATGGTCCGGCAGGGAGGACTTTGACATAACCATGGTGGAGTTTATGCCCATCCTCAAAGCTGAGACTGATTACATCAATAATGTTTACTTAGATATGAACACCTCCACGGTGACCTCTCCTACTTCCCTCTCGTATGAAGCCGAACTTGCAGATGTAGTCCACGGAGTGATGTGTCCGCTGTGCTATCCCTGCAAGAGCTTCCCCACGCTGGCGAGCCTGACGGAGCACGTGAACAAGCAGCACTGCTCCAAGGGCGCGCCCAACTACTGCTGCCGCGCGTGCATGAGCAGCTTCCACAGCCGCACGGAGCTGCAGCGCCACCTCGCTGCCGAGGCGCAGGACTACCAGCAGCTGCTGCTGTGCCAGCTGTGCGAGCTGCAGTTCCAGAGCCGCGAGGCTGCGCGCGCCCACCTGGCCAGCCACTGGGAGGACATGACCCTGGTGGAGTGCTGCAGTCCCCAGCTGGGGCTCAAGTGCCGATACTGCCCCATGCTGTTCTGGCATGAAATTGATCGCGAGCGACATCACTGTGAAGCGCACTATGTGACGTACAATGACCAATTTTACAAATGTAGTACATGCAACATGCTATTTAGCGAAAAGATATGGTGGGCGTCGCACGAGCTGCAGGAGCACCTGCAGCCCGGGGAGCAGCTGGGGGAGGTGCCCTACTGGCTGGCCTACAAGTGCGGGGCGTGCTGCCGCGTGTTCCGGGACGTGCCCTCCCTGCGCGAGCACTGCGTGGACCTGCACCCCACGCAGAGGCGCATCTACTGCGCGGTGGCCGGCTGCGTCTCCAAGCCGTTCCGCATCCCCAGATATCTCAAGCAGCACAATGAGGTGGTGCACTCGGTGGAGCGCGGGCAGCTGGCAGGCGCGGGGCTGCAGTGCGAGGAGTGCGGCAAGGTGCTGCGGACACAGCGCGCGGCCACCACGCACCGCACCGTGGTGCACGGCCACAAGGCCAGCAGCAGGTTCAAGTGCCGCATCTGCAACTACGGCCTGCCCTCCATACAGGACAGgaAGCTGCACTACCTGGTGATGCACCCTGGCGTGGCGCCCTTCTCCTGCTCTGTGTGCGGGAAGGGCTACAACAACAAGTCTGCGCTCTACACGCACCGCTCCCAGAGCCACTCCGTGCACCTCGCCACCTACACCTGCTCCTTCTGCGATAAGATATTCAATAAGCGGGACTCGTACAAGGAGCACCTGCTGATCCACGTGGGCCCGCGCCATGCGTGCCCGCACTGCTCTCGCGTGTTTGTGCAGCGCTCCAACATGCTGCGCCACATCCGCCTCCACACAGGGGAGAAGCCCTACCCCTGCCTGCACTGCGACAAGACCTTCGCCGACAAGGGCGCCTGCAACTCACACATCAGgaCCCACACTCGTCAAGATGTTCACGCGTGTCTGTACTGCGGCCAAGAGTTCCTACAGAAACAGAAATTAAAATATCACCTCAGGAAACACACGGGAGAAGACTTGGAGACGTGTCCAGTTTGTGCTAAGAAGTTCACCAACCACACCAACCTGCGAGAACATATGAAATGCCATGATGAAACCTGCCCCATGGCCTGCCACCTTTGCACAGATAAGGTGTTCATGTCCCCGAGGTACTGGGAGCGCCACATGAAGGACAGCCACAGCGAGACAGCAGAGGTGCACCCTTGCCCCATCTGCGGCCGCTCCTGCCCCAAGCGCTCCGCCCTACGCCACCACCTCATGTCCCACTCCAAGACTAAATACATACAGTGCATGCTATGTGGGAAGCAGTACAACGGGAAGAAGAGCATCAACAGGCACCTGCAGAAGCGGCACACCATTGACGGGACAGGGGAGAGGTACAGCAAGTACTACAGCCAGCTGGACCCGCGCCAGTGCGGCCTGGGCCTGGACGAAGAAACCATCCTTAAGGTCTTCGGacctcaaaaaaatataaaattcgaGCTACCCCTGATGGTGCCGCCGCTCAGGATTACCAAAAATAAAGTGTCAAAGGTTTACAAGACCGTGGACAGTGATTCCGATCACGAATACAAACCACAGGGCGCTTACAAGAAAGATCCCGTGGACGCTGTCAACACTCCTGAAGGAGACGGACCTATCTCGGGGACAGACCTCGCAACCCTGAGAAACCGAGCTAAACGGGAAAGCGCAAGAAACATTAAATACTGTTACGGATCAGATGAAGATGACGATGCAGATTTTGTTAAGAAATCTAAAGCCAAAAACAAAGTTAAGGTCAGGAGAAAACAGAAATCGTTTACGTTTAATAATTTACAATCAGATTCGATTCTCAAGAGCGCCTTGACGCGGCAGCAAGCAGATGAAGCTCCTGTCCCTGacgatgatgaggatgatgataGAGAACCAATGTTTCCTTTAGTTGAAATAAAATGTGAGCCCGTGGAGTACGACTGA
Protein Sequence: MTELGSVGSEESDNEPLSVLAEDKHAPPYGAMEPGGFPEPEVLLQTEGLSEPLELSSRPLFTKLFQQKKRWRRTEVVSVPDICHLQPELNAIEQEHVLRNCALADTFITHVLPPLAPQQQQQDLWLDVKPLSQSGAMACRLCMECFVNKSKLVMHYVLNHSKAYCGNCRYLLDEGEAWSVHWRRHLPLRCCYCQEDFMEERHLRTHYTHAHQLSHCRMCNLMLPEGPAYQSHLLKKHTVTMESYEERDLVWEILNPATWMFSCLLCYKYDIPHYDFLRHFLYHHKFTLKCLASLVNGKKLGFTVLGANLRNVNPEGDAPPEHPALTEHSPNRNFPIGDDHMDYQLMEALIPEIKQEVLSEDENEGNHLRIYQENLNVKHEVLDPGNDISMTSEKFLVKWSGREDFDITMVEFMPILKAETDYINNVYLDMNTSTVTSPTSLSYEAELADVVHGVMCPLCYPCKSFPTLASLTEHVNKQHCSKGAPNYCCRACMSSFHSRTELQRHLAAEAQDYQQLLLCQLCELQFQSREAARAHLASHWEDMTLVECCSPQLGLKCRYCPMLFWHEIDRERHHCEAHYVTYNDQFYKCSTCNMLFSEKIWWASHELQEHLQPGEQLGEVPYWLAYKCGACCRVFRDVPSLREHCVDLHPTQRRIYCAVAGCVSKPFRIPRYLKQHNEVVHSVERGQLAGAGLQCEECGKVLRTQRAATTHRTVVHGHKASSRFKCRICNYGLPSIQDRKLHYLVMHPGVAPFSCSVCGKGYNNKSALYTHRSQSHSVHLATYTCSFCDKIFNKRDSYKEHLLIHVGPRHACPHCSRVFVQRSNMLRHIRLHTGEKPYPCLHCDKTFADKGACNSHIRTHTRQDVHACLYCGQEFLQKQKLKYHLRKHTGEDLETCPVCAKKFTNHTNLREHMKCHDETCPMACHLCTDKVFMSPRYWERHMKDSHSETAEVHPCPICGRSCPKRSALRHHLMSHSKTKYIQCMLCGKQYNGKKSINRHLQKRHTIDGTGERYSKYYSQLDPRQCGLGLDEETILKVFGPQKNIKFELPLMVPPLRITKNKVSKVYKTVDSDSDHEYKPQGAYKKDPVDAVNTPEGDGPISGTDLATLRNRAKRESARNIKYCYGSDEDDDADFVKKSKAKNKVKVRRKQKSFTFNNLQSDSILKSALTRQQADEAPVPDDDEDDDREPMFPLVEIKCEPVEYD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -