Basic Information

Insect: Agapetus fuscipes
Gene Symbol: -
Assembly: GCA_951799405.1
Location: OX637334.1:20589589-20591378[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0024 0.16 13.0 3.0 1 23 110 133 110 133 0.96

2 7 8 5.4e+02 1.9 3.4 1 23 143 165 143 165 0.95

3 7 0.00044 0.03 15.3 2.5 2 23 204 224 203 224 0.97

4 7 5.5e-06 0.00037 21.3 0.2 2 23 230 252 229 252 0.96

5 7 0.00053 0.036 15.0 4.0 1 23 258 281 258 281 0.98

6 7 6.6e-05 0.0045 17.9 5.4 2 23 288 309 287 309 0.97

7 7 0.00013 0.0092 16.9 1.2 1 23 315 338 315 338 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0024	0.16	13.0	3.0	1	23	110	133	110	133	0.96
2	7	8	5.4e+02	1.9	3.4	1	23	143	165	143	165	0.95
3	7	0.00044	0.03	15.3	2.5	2	23	204	224	203	224	0.97
4	7	5.5e-06	0.00037	21.3	0.2	2	23	230	252	229	252	0.96
5	7	0.00053	0.036	15.0	4.0	1	23	258	281	258	281	0.98
6	7	6.6e-05	0.0045	17.9	5.4	2	23	288	309	287	309	0.97
7	7	0.00013	0.0092	16.9	1.2	1	23	315	338	315	338	0.97

Sequence Information

Coding Sequence: ATGAAAAACATCGGTGTCTCTGTCATCATCAATGGCCAGCCGAACCTTATATCAAACATTATAGAGACTTGCTTCAATATACAGcttcTATCAGATGATACATTTCCTCAAAATATATGCATCCCATGTATCACGCAGCTGCAATCTGCTTACTTCATGAAGCTGAAGATAAAAGAGACCAGCAAAATTATTACAAGGCGTGTGGAAGAAATGAAGAGAGAGGATTTCAGCATTGCGGAGTTTGAAGATGATGGCTACTGCAATGATGATGCCGTCAGCTGCTCATATTCCCCACCCAGTGCAGTGAAACAAGAAAGTGAGGTTAAGTTTTATTGCCTTCAATGCAAATCCAGTTTCTCCACTCCGTTGACACTCAAGCAGCACTATCGGCAAAAGCACAGGCCCGCTGGCATGCTCAGGGGAATATACAAGTGCAAGTGCTGCCTGGAACGCTTCACCAACCTACAGCTGGCAGGGAAGCACCGGGAGAGGCACCTCACCCCCAACACGTGCTGCTGGTGCGCCGACGTCATCACAGACTACGACTCCCATCTCCTGTCCTGTGATAAGTATGCGGAGTTCATGGCATCAGACCAGAGACAAACTATTCCATGTCATCACTGTGGCAAATCATACTTGAGGGATTACCTGCGAGTTCACTTGCTCACGCACGGCCCAGATGTCCTGAAGTGCCCCCTGTGCGAGCGGGGCTTTAAGGTGAAGGGGAACCTCGCCACTCACATGAAGGTGATGCACAGTCAGGTGAGGCCCCACAAGTGTCCGTACTGTGAGCGATACTTCAAGCTGTCGGGGACACGGAAAAGACATATTCGAaaagaccatttaaaagaaagaaatcAAAAATGTGAAGAGTGCGGGAAAGGTTTCTTTACAAGAAAGTGCTTGCTACGCCACATGTGTGTCCACACAGGAGAGAAACATTTCAAATGCCTGTATTGTGATAAAGCTTATCAAAACAGCTGGGGATTAAAAATGCACACAAAGAGTCAACACTCCAAACAAAGGACTGCTGATTCTTTACCTTCTGAAATGTATGAATAA
Protein Sequence: MKNIGVSVIINGQPNLISNIIETCFNIQLLSDDTFPQNICIPCITQLQSAYFMKLKIKETSKIITRRVEEMKREDFSIAEFEDDGYCNDDAVSCSYSPPSAVKQESEVKFYCLQCKSSFSTPLTLKQHYRQKHRPAGMLRGIYKCKCCLERFTNLQLAGKHRERHLTPNTCCWCADVITDYDSHLLSCDKYAEFMASDQRQTIPCHHCGKSYLRDYLRVHLLTHGPDVLKCPLCERGFKVKGNLATHMKVMHSQVRPHKCPYCERYFKLSGTRKRHIRKDHLKERNQKCEECGKGFFTRKCLLRHMCVHTGEKHFKCLYCDKAYQNSWGLKMHTKSQHSKQRTADSLPSEMYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -