Afus018777.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Agapetus fuscipes
Gene Symbol
pho
Assembly
GCA_951799405.1
Location
OX637355.1:4669560-4682525[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.02 1.4 10.0 3.9 1 23 564 586 564 586 0.99
2 10 0.00022 0.015 16.2 1.4 2 23 594 615 593 615 0.97
3 10 0.04 2.7 9.1 6.1 1 23 619 641 619 641 0.98
4 10 0.00019 0.013 16.4 0.6 1 23 678 701 678 701 0.95
5 10 0.00031 0.021 15.8 0.4 1 23 707 729 707 729 0.96
6 10 0.0023 0.16 13.0 0.7 1 22 735 756 735 760 0.93
7 10 0.0014 0.093 13.7 1.4 1 23 768 791 768 791 0.95
8 10 0.00093 0.063 14.3 1.6 2 23 798 820 797 820 0.94
9 10 0.013 0.87 10.7 0.2 3 23 831 851 830 851 0.96
10 10 5.5e-06 0.00038 21.3 0.4 1 23 857 880 857 880 0.97

Sequence Information

Coding Sequence
ATGTCTTCTTGTGCAAACCTCTCCTCAGGGATCGCGTCCTTCAGGGAGAATGTCTGCCGCACTTGCTTGCTGACTTCTCCCAAGGCGCTCCATCCCTTACAAGACCAAGACAAACAAGCGCTCCTCAACCTCTGCAACGTCCAGGTGAGGAGTGTTGGGGTGCTGCCCTACCTGTATGGAGTGCTCGCCCCTGCTATAGCCTTGTGTTGTGTTCAGGTGAGGAGTGTTGGGGTGCTGCCCTGCCTGTGTGGAGTGCTCGCCCCTGCTATAGCCTTGTGTTGTGTTCAGGTGAGGAGTGTTGGGGTGCTGCCCTGCCTGTATGGAGTGCTCGCCCCTGCTATAGCCTTGTGTTGTGTTCAGGTGAGGAGTGTTGGGGTGCTGCCCTGCCTGTATGGAGTGCTCGCCCCTGCTATAGCCTTGTGTTGTGTTCAGGTGAGGAGTGTTGGGGTGCTGCCCTGCCTGTATGGAGTGCTCGCCCCTGCTATAGCCTTGTGTTGTGTTCAGGTGAGGAGTGTTGGGGTGCTGCCCTGCCTGTCTGGAGTGCTCGCCCCTGCTATAGCCTTGTGTTGTGTTCAGGTGAGGAGTGTTGGGGTGCTGCCCTGCCTGTATGGAGTGCTCGCCCCTGCTATAGCCTTGTGTTGTGTTCAGGTGAGGAGTGTTGGGGTGCTGCCCTGCCTGTCTGGAGTGCTCGCCCCTGCTATAGCCTTGTGTTGTGTTCAGGTGAGGAGTGTTGGGGTGCTGCCCTGCCTGTCTGGAGTGCTCGCCCCTGCTATAGCCTTGTGTTGTGTTCAGGTGAGGAGTGTTGGGGTGCTGCCCTGCCTGTCTGGAGTGCTCGCCCCTGCTATAGCCTTGTGTTATGTCCAGGTGAGGAATGTTGGGGTGCTGCCCTGCCGCCTGTGTGGAGTGTGTCGGCTGCGCCTGCAGCGCATGCAGCAGTTTGTCTCCCAGGCACGCGGGGCCCAGGACGCCCTCATGGACTACCTGCTCAACAACCACGCTGAGGACGATGATGATCCCATCCTGCAGATAAACATAGACACCCTGAGAGATCTCCGAGATAGATGTTTCCCAGCTGAGGGGCTCGGTTTCTCCAAGCTTGTCACAGTGGACTGCATGGTAGATGATGAAATTAAAAGTGAAAACTCCGCCACATTCACAAACTGTATAAAGTGGTTGTCCTTGGAAGACGATGCCAACCTGGAGCAACCCAGCAGAGCCGACATTAAGCATGAAGTAGACATCAGCGATGGGGAGTCAGAGGGCGGAGGAGAGTACGGAGAACTACTCTTAGACAGGATCAAGGAAGAGCCTGATGTGACAGAGAGAAAAGTGACAACTAAAAAAAGTGCCAGAAAAAAAGTCAAAAGTCGTAAATCCAAacaatctaaaatgaaaaaagCAATTATGAAAGTGTTGGGGAAATCTAAAGCAGCTGGAAGGACAACTGCTGATACTTCAGGAGAAGTCAGCTGTGGTGTTGTGGAAGATTGTGATGTGATCATGGACAAGGGCAGTTTGAGTGGAGAGTACATAGACCCAGATGATCTGCCCCTGGGGAGCAAGTCGGTCCACAGAGACTCCTTCCAGCATTTTGACCGCAGCCTGGTGCACATCATCAAGTTGACCTTGGACGAGCAGCTGCAGGAGTTGGAGGAAGCGAGGAAGAGTGACAAGTACACGCTGTCTCCGTACAAGTGTGTCATGTGTGCCAAACACTTTGCTTATGAGCTCACATACAAAACCCACATGAAGAAGCACACCGAGGAGGCAGGCAAGGTGTCCTGCCCCATCTGCCGGCAGCGTTTCAAGTCCCACAAGAGCCTGGCCGTGCACCTCAACAGCCACTCAGAGCAGTTCCAGTGCAGCAAGTGCGGCGTGAAGTTCAAGACGCGCTGCGCCATCTCCACGCACCTGCACAAGCACTCAGCCAGCCTGCCGCAGCAAAACTACCAGTGCAAGCAGTGCGGGGAGATCAACCATACATATCCTGCCCATCGCCGACACACGAGAAGTCATCAGGACAGGAGCAAGCACAAGTGCCACCTGTGCCCCAAGGCCTTTGCTGAGGCCAGCTTACTGGCCAACCACGTGGCCAGTCGCCACAATGGCATAAAGAACTACAGCTGCCCGCAGTGTGAGCGCATGTTTGTGAGCCGCGGGGCGCTGCGCCTGCACTCCACCCGCCACTCCAGCAACAAGGACTTCTACTGCGTGGAGTGCAACGCCAATTTTAAGACCCGCGCCTCCCTCGAGATGCACCTCAAGATCACCAAGAAGCATGTGCAGCCCGAGACTCTCAGGTTCCAGTGTGACCAGTGTCCGCGCCGCTTCGACAGCAACTACAAGCTGGGCGTGCACCTGGACGTGTGCCACCTGGGGGTGAGCCGCTGGCCCTGCCAGGCCTGCTCCATGAGTTTCAAGACCCCCAGCGGCCTGCGACACCACCGACAAAGGAAGCACGAGAACAAGAAGACGCCCAAGAACAACATTTGCGAGCTGTGCGGGAAGGGCTTCGGGTCCAAGGCCATTCTGCGCCACCACGTGCTGATCCACACGGGGGAGAAGCCCTTCTCCTGCAGCTACTGCGGCACGGCTTTCAGGCAGAAGGCCGCCATGACCACGCACATCCGCCTGGTGCACCTCAAGGTCAACCGCAATGGCACCACCAAGAGCTAA
Protein Sequence
MSSCANLSSGIASFRENVCRTCLLTSPKALHPLQDQDKQALLNLCNVQVRSVGVLPYLYGVLAPAIALCCVQVRSVGVLPCLCGVLAPAIALCCVQVRSVGVLPCLYGVLAPAIALCCVQVRSVGVLPCLYGVLAPAIALCCVQVRSVGVLPCLYGVLAPAIALCCVQVRSVGVLPCLSGVLAPAIALCCVQVRSVGVLPCLYGVLAPAIALCCVQVRSVGVLPCLSGVLAPAIALCCVQVRSVGVLPCLSGVLAPAIALCCVQVRSVGVLPCLSGVLAPAIALCYVQVRNVGVLPCRLCGVCRLRLQRMQQFVSQARGAQDALMDYLLNNHAEDDDDPILQINIDTLRDLRDRCFPAEGLGFSKLVTVDCMVDDEIKSENSATFTNCIKWLSLEDDANLEQPSRADIKHEVDISDGESEGGGEYGELLLDRIKEEPDVTERKVTTKKSARKKVKSRKSKQSKMKKAIMKVLGKSKAAGRTTADTSGEVSCGVVEDCDVIMDKGSLSGEYIDPDDLPLGSKSVHRDSFQHFDRSLVHIIKLTLDEQLQELEEARKSDKYTLSPYKCVMCAKHFAYELTYKTHMKKHTEEAGKVSCPICRQRFKSHKSLAVHLNSHSEQFQCSKCGVKFKTRCAISTHLHKHSASLPQQNYQCKQCGEINHTYPAHRRHTRSHQDRSKHKCHLCPKAFAEASLLANHVASRHNGIKNYSCPQCERMFVSRGALRLHSTRHSSNKDFYCVECNANFKTRASLEMHLKITKKHVQPETLRFQCDQCPRRFDSNYKLGVHLDVCHLGVSRWPCQACSMSFKTPSGLRHHRQRKHENKKTPKNNICELCGKGFGSKAILRHHVLIHTGEKPFSCSYCGTAFRQKAAMTTHIRLVHLKVNRNGTTKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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