Basic Information

Insect: Agapetus fuscipes
Gene Symbol: -
Assembly: GCA_951799405.1
Location: OX637343.1:9823434-9833787[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.094 6.4 7.9 0.2 1 23 212 235 212 235 0.91

2 8 0.046 3.2 8.9 0.2 2 23 397 418 396 418 0.95

3 8 0.2 13 6.9 1.2 1 20 425 444 425 447 0.80

4 8 0.00012 0.0079 17.1 0.0 2 23 454 475 453 475 0.95

5 8 4.1e-05 0.0028 18.5 3.5 1 23 481 503 481 503 0.98

6 8 7.8e-05 0.0053 17.6 4.2 1 23 509 531 509 531 0.97

7 8 5.6e-06 0.00038 21.2 2.3 1 23 537 559 537 559 0.97

8 8 0.00059 0.04 14.9 0.8 1 23 573 596 573 596 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.094	6.4	7.9	0.2	1	23	212	235	212	235	0.91
2	8	0.046	3.2	8.9	0.2	2	23	397	418	396	418	0.95
3	8	0.2	13	6.9	1.2	1	20	425	444	425	447	0.80
4	8	0.00012	0.0079	17.1	0.0	2	23	454	475	453	475	0.95
5	8	4.1e-05	0.0028	18.5	3.5	1	23	481	503	481	503	0.98
6	8	7.8e-05	0.0053	17.6	4.2	1	23	509	531	509	531	0.97
7	8	5.6e-06	0.00038	21.2	2.3	1	23	537	559	537	559	0.97
8	8	0.00059	0.04	14.9	0.8	1	23	573	596	573	596	0.96

Sequence Information

Coding Sequence: ATGGACTCACAGGGTGCACACGTAAAAATCAAATCTGAACACTGCGTTGTTTGCAACTCTTCGTATGACGGTGCCTCTTGGGATATTTATTCTACGTACACAGAAGGATCGCGTTGTTTATTAGCAGAGTACCTCACAAAGACGAGCGAATCCATTTTCGATCGCGACAAAATTTCATCTCTAAGGATTTGCAAGTCCTGCTATGACTTGGTGATCCAGCTTGATGTGGCGGAAATGGactatttgaatttgaaaaacgaATTTCTTATTGTTCTAAATGGTAACTTTAAAGCTAGCGCGCTTACGCCGATCAAGAAATATGTAGAATGCCAGACACAGACTGAAGATGGCTACGGAAGTAAAATAGAGTTTTGTTCTGTTGAAATTAAAGATGAATGCGATGATGACGACAATATCCCATTCTTGGATTCCCCGGCTCCTGTAGATTATGATTCAGATGACATCCCGCTGGCCAAGAAGGAAAAGGTGGAGAAGGCAGAGAAAGCAGAGAAGCCCGCTAAGGAAAAGCATAAGCATGAGAAGCATTTTAAAAAAGCGCCTAAACTTGAAAAGAAGGAACCGGATCAAATAAAATCAGAAATATTGGACATATCATACGACCCCTCAGACAACTTCAGCTGCCGGGAATGCTTGGAAAAGTTCACCACCAAGGCGCAGGCGGCTGTCCACGCGTTCATGGTGCACCGCATCAACCTGGCCACGGATCCCGGCATTATTCTCAAGGCCAACGGGAAACCGTGCAGGACGCGCCGGGTCAAGAAAAGAAAGACTTACTCAGAGCTGGGCGCTTCCGACATAGACGAAGATCCCGATGACAAGGAATGGTCGGCAGCCGGGACCTCTGGGACTGTAATAAAGGAGCGCCCGGGTCCTGGAAGAAAACCCAAGGGTCCCTTGCTGGCCACACCAATCCCGGTGAAGCCCTTTGATGGCATCCTGCCCTCTCCATCTCCCTCGGCCGATCAGCTGCAAAAGAAACTGGGTGGGGGGAGTCTTACCATTAAAAAGGTGGGATCCAGTAAGAAGAGCAAGCGCCCCCGGCCAGACAACGTCCTGGTGGTGGGCCAGGCCTCGGCCTCCTCGGTGCTGAGCCAGCTGCAGCTGGTGGGGCTGCAGGTGATGTCCAACGTGTCAGAGAGGCCAGTGAAGAAGCCCAAGCAGCTGCTGCCCTGCCTGCAGTGCAAGGCCACCTTCGCCACACAAGCTCGCCTGGACTACCACATGGTGAAGCATCTTGCCTCCAAGTCTCCCTTCATCTGTGAGATATGTGGAGCTTCCTACAAACACAAAAAGGCCTGCGATATACACGTGGGCATGCACAAAGGCATTAGTCCGTGGAAGTGCGCGCAGTGTGGCAAGATCTTCCCCTCCAAGGGCGCCCTGTCCCGGCATGAGGCCATCCACACGGGGAAACCCAACTATCAGTGCGACCTGTGCGGCAAGTCGTTCATCCACACGTCGTCGTTCAAGATGCACAAGCTGTCGCACACGGGCGTGAAGCCGCACTCGTGCAACAAGTGCGGGCTGGCGCTCATGACGCGCTCCCACCTCAAGAGGCACCAGAGGGTGCATAGCGGAGAGAAGAGACACGAGTGCCTCATCTGCGGGAAGAAGTTCTCCGAAAGatacaACCTGTACGCGCATCAGAAATCCCACGAGACTCTAAACGGCATCATCCAGCGTCAGATGAAGAACCACGACTGCAGCGTGTGCGACGCCACCTTCAACCGGCGCTACATCCTGGAGAAGCATATGGAGACCGTGCACCAACGCGTCATGGAGGTGGGGGTGAAAAGGCCCAGGAACACCATGACCAAGCTGCTGAAGAAGCAGGCCATGAAGGCTGAGGAGGGGCAGGAGGGGCAGGAGGGGAACCCGGCGGAGATGTCCATCAGCAACGAAATAGACATAAAGCCTCCATCCCCTGTGGCTGCCCACACGCCGCCCCACGTGCACACCACCGACAGCACCTCCAGCACGCTCATGGGCGAGAGCAGCAACTATCAGTCCACCTCCGTCACGGTCCTGGACGCCTCGCCCAACACGAGCCGCAGCGAGCCACCTCAGCAGTCGTCATCACAACAGCAACAGCAGGAAGCTCCTGGAAGCAGCGGGCCCCCTGCTTCCTCCTCCATTCCGCCCGGAGCAGCGGGACTGCCCTGGGCCACCCTGGCGCACTACCATCTGGCCAACGATTACCCACTGAGGATGCACGGTGTGGATTATGCAGGATATCTCAACAGGCAATAG
Protein Sequence: MDSQGAHVKIKSEHCVVCNSSYDGASWDIYSTYTEGSRCLLAEYLTKTSESIFDRDKISSLRICKSCYDLVIQLDVAEMDYLNLKNEFLIVLNGNFKASALTPIKKYVECQTQTEDGYGSKIEFCSVEIKDECDDDDNIPFLDSPAPVDYDSDDIPLAKKEKVEKAEKAEKPAKEKHKHEKHFKKAPKLEKKEPDQIKSEILDISYDPSDNFSCRECLEKFTTKAQAAVHAFMVHRINLATDPGIILKANGKPCRTRRVKKRKTYSELGASDIDEDPDDKEWSAAGTSGTVIKERPGPGRKPKGPLLATPIPVKPFDGILPSPSPSADQLQKKLGGGSLTIKKVGSSKKSKRPRPDNVLVVGQASASSVLSQLQLVGLQVMSNVSERPVKKPKQLLPCLQCKATFATQARLDYHMVKHLASKSPFICEICGASYKHKKACDIHVGMHKGISPWKCAQCGKIFPSKGALSRHEAIHTGKPNYQCDLCGKSFIHTSSFKMHKLSHTGVKPHSCNKCGLALMTRSHLKRHQRVHSGEKRHECLICGKKFSERYNLYAHQKSHETLNGIIQRQMKNHDCSVCDATFNRRYILEKHMETVHQRVMEVGVKRPRNTMTKLLKKQAMKAEEGQEGQEGNPAEMSISNEIDIKPPSPVAAHTPPHVHTTDSTSSTLMGESSNYQSTSVTVLDASPNTSRSEPPQQSSSQQQQQEAPGSSGPPASSSIPPGAAGLPWATLAHYHLANDYPLRMHGVDYAGYLNRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -