Afus010692.1
Basic Information
- Insect
- Agapetus fuscipes
- Gene Symbol
- -
- Assembly
- GCA_951799405.1
- Location
- OX637343.1:10996910-11007488[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.066 4.5 8.4 1.2 1 23 175 197 175 197 0.96 2 29 0.019 1.3 10.1 0.2 2 20 246 264 245 266 0.92 3 29 8.2e-05 0.0056 17.6 1.4 2 20 284 302 284 304 0.94 4 29 0.44 30 5.8 0.7 3 22 340 359 339 359 0.94 5 29 0.087 5.9 8.0 1.6 2 23 370 391 369 392 0.93 6 29 0.0017 0.12 13.4 0.2 2 23 438 459 437 459 0.94 7 29 0.003 0.2 12.7 2.5 1 23 482 505 482 505 0.96 8 29 2.2 1.5e+02 3.6 5.0 1 23 522 545 522 545 0.96 9 29 2 1.4e+02 3.7 0.3 2 23 581 602 580 602 0.96 10 29 0.0003 0.02 15.8 0.9 1 23 613 635 613 635 0.98 11 29 0.031 2.1 9.5 0.6 1 20 703 722 703 724 0.92 12 29 0.00062 0.042 14.8 0.2 2 23 742 763 741 763 0.96 13 29 0.092 6.3 8.0 0.2 2 23 809 830 808 830 0.91 14 29 0.46 32 5.8 1.2 1 23 852 874 852 874 0.92 15 29 0.078 5.3 8.2 4.6 1 23 883 905 883 905 0.89 16 29 0.0077 0.52 11.4 5.9 1 23 913 935 913 935 0.99 17 29 7.2e-05 0.0049 17.8 0.1 2 23 954 976 953 976 0.96 18 29 8.9 6.1e+02 1.7 1.4 2 23 1026 1047 1025 1047 0.79 19 29 0.0097 0.66 11.1 3.6 2 23 1058 1080 1057 1080 0.94 20 29 0.0093 0.63 11.1 1.1 2 23 1104 1125 1103 1125 0.95 21 29 5.7e-05 0.0039 18.1 0.7 2 21 1129 1148 1128 1149 0.94 22 29 1.9 1.3e+02 3.8 3.1 2 23 1168 1190 1167 1190 0.93 23 29 0.25 17 6.6 0.6 1 23 1205 1227 1205 1227 0.98 24 29 0.012 0.8 10.8 3.5 3 23 1235 1255 1235 1255 0.99 25 29 0.23 15 6.7 0.2 2 23 1266 1288 1265 1288 0.91 26 29 5.3 3.6e+02 2.4 0.4 2 12 1305 1315 1304 1323 0.80 27 29 0.61 41 5.4 1.8 1 19 1326 1344 1326 1347 0.91 28 29 0.033 2.3 9.4 4.5 2 23 1442 1464 1441 1464 0.96 29 29 1 70 4.7 0.6 2 10 1480 1488 1480 1498 0.88
Sequence Information
- Coding Sequence
- ATGTCGCTCGTCCTCAAGCTCAGCAAATGCCGCTTATGCCTCAAGCTCGGtgacttttattccattttcgcCGTGGACAACTCGATTCAGCTGTCTAAAATGGCCATGGCGTGTTCCAATATTAAGATCCAAGAGGGCGACGGACTTCCCGAAAAGGTGTGCGGGGAGTGTGTCGAGAAACTGAGTtctgcttatttatttaaacagcaATGCGAAAGATCAGATGCCGAACTCCGAAAATCGCTTCAATTGACATCTGGTATTTCGGAGATTGCATCTTATGGCAGAGGCAGCTCAGATTCAGGTTTCTCAAACAGCACCAATGTCTCCACATCCAAAAAGGGCTCCAAAAAGCGGAAACTACAAAATTCCACTCCTGTACCCGGCTCCTCCATGAACAATGACACCCTCCTACAAGAATCTTACAGTGTGGATATCCACGATCCGTTGAATTTAGAAGGACTTCACAGTGGCAACATTGATCATTCTCAATCAGACAGCAATGAAGAAGACGGGAAGTGCTATTATTGCAAACCCTGCGACAAGTCATTCCTGACAGCCAAAGGCCTGAATGTCCACATATCACACCATCAAAAGTTCTCAAGTTCGCTGGCAAGCAATAAAGAAGAAGACTCACCGTTGCTGAAAGCCCAGTTAAGCAAGGCACCAGTGTACCGGGAAGAATCCTCTCAAGACTCCAAGAGCTCATCAAAGAGTTCCACTTCCAATCCATTAACCTGCAAAGCATGCAACAAAACCTTCAAACTCAGCATCATGCTGCGCAGACACGCTTCCATGTGCCAAGGCAGCCAATCCAGAGACACTTCACAATCACCGGTCACACTTGAACGATGTTCCAATTGCTCAAAGAGGTTCAAATCTAATTCTGACCTGAAAAGGCATTTGACTATTACAAACTGTGGCACTCTGGTAAACTGGACTCCCAAAGGTTCtgaatcctcaagcaagataACTCCAAATAGAAAACAGGCAAAACGTAAAAAAGGTCCGGCCATTTGCTCCAATTGCGACACCAAATTCGGGAATTTTACTAAAATGTACAGCCACATGAAAATGTGCGTAAAAAAGAAAACTCCCAATGTTATCCAATGTATGGCTTGTAGTACAGTGTACTCCCAGATGACAGGGCTCTACAAGCATCTAAGGAAACATCATCTTCCATATGATGATATAACTGTTGAAGTGCCGGTTAAAGAAGTGGTTGTGAAGCAGGAACCAATGGATGAACAGGAATCAATGGATGAACCAGAACCAATGGAAGAACAAGAGGAAGGTGAAGAAGAATTGCTGAGGTGCAGGGAGTGCAGTGAGACCTTCACTGATCAGCAACAGCTGGTGATGCATCTGGCAGCTCACATGGCCAACATGAATGACTTCAAGAGCAAGGAAAAAAAGGATGCCACATTCAGATTCAACAAGAACTATAATTGCTACAAGTGCACCAAGCCATTCAAatacCTCACCAGCTATAAAAACCATCTCCGCGATGCTCACGGTGTCACACAAGAAGAAGCTGATAGCATCCAAAAGCAAGGAAGCATTTTCCGCTGTGTCGCCTGCAAAAAGGACTTCCGATCCCATAAGTCCCTCATATGCCACCAAAACAGCGTTCACGGGAAAGAGAGAAAACTCCTTCGTGATTCCACTTCTACTCCCGCAATCATTAAAACACCCAACCCGCCTAACAAAGGCATAATATTCTTCTCCAAGTCACCGGTCAAATGTTTGATCTGCGACATAACCTTGAAAGGATTGTACGAGACTAAAATGCACAACAGAATGCATGCGTTGAAGAATGAAAAGACAAAGAATGAATATGTTTGTCCCACGTGTAATCTCTCGTTCTTCAACTCGAGAATGTTCAGGATTCATATTAAGGAGCACAATGACTTGGTGGTGGAACAGAAAGCCAACATTGATGCAACAGAAGGAAACGACGGGCTGGAAGCTGAAGAGCATGAAAGTGACCCGTCTCAATTCTGTGCTGTGAAGATAAAGGCTGAACCCGAGGATCCCGATGACCCGGTTCATGAGCGGGCGGACGGGAGCGGTCAGCCGCAGCGCCTCATGGTGAGCCTGGGGGGCTTCAAGTGCCCCACCTGCGGCAAGGTGCTGGACTCCATCAAGCAGTACAAATACCACACCAGCAGGAACTGCAGCAGGGGGGCCCCCATGCAGTTGCCCCCCCCAGCCAGGATTTTGCCCTGTCCCACGTGTGATGAGGTTTTTAACATTGGAAGTCATCTGAAACTGCACATCAGGCAACACGCCCGCGAGGCCCTGGTGGACCCCACAACCATCTACTGCAAACCCTGCAAGCACCAGGCCAAGTCCTACAGGAGCTTCCTCTACCACCAGCACTGGCACAGGAGGGAAACCAGAAACGTGACACCTACGTCCTTCGCTTGCATAGTCTGCAAAGAAAACTTCCCTACCAGAGCTGACTACCAAGCACACTACCAGCAACACGTCAAAGATGGGGAAGCCACTAACATTGTAGAGACGTATGAAGTTAACAAACAAGTGACACCTTACCAGTGTCACATTTGCCAGAAGTACATGCCCACCGATGTATCACTCAAGTACCACACAGCTTGGCATGTCAGCTCCTGTTCAATGCGGCGCTACAACTGCGAGTACTGTGACAAAGTGTTCACGAGCAAGGGACGGCATCACATGCACGTGAAGATGCACAGACAAAACATGCCGGGCGCCTTCAAATGTCACGTCTGCGGGAAGAGCATGCACAGCGAGGGGCATTACAATATTCACATGAAAATGCATGCCAACGCTAAATTCAAGCAGAGGATCAATCCATTGTCAATGTTGAATCATGTTAGCTGTCCGATTTGCGATGTCAAGTTCCCGTATCAAGCTAAGCTCAACCGGCATTtgaaaatggtgcatcctgagAATAAGATGGTTAAAAAATTGGATCCCGACGGGGATTATTTGGAAAAGAAATACGTTTGCACTATTTGTTGTAAAGAGTTTAATTCTGAAAGGAAATTGTTGTTCCATAAGACGACTCATGCGCGCCGAATGGTTTATATCAAGTGCTCCTTGTGTGGGAAGAAGAGCCCGTCTATGAAGTATCACAGGCTGCACGTTAAGGCGCACATGGCTCAGAGATTCAAAAGTGACCCCTTAAAGTGTGAGCACTGCGAGGAAACCTTTGTGAAGCGTTATAGCTTGCATTTACATCTGTTCCGGGCGCATAACATCAATCATAATTACATTGCGGAAAATAATGGTGAACAAGATGATGACAAGGAGTTGAAAGAGTTGCAGTGTCAGCAGTGCAGGAAGATCTTATCCACGGAGAGCAGCTACCAGAGACATCTGGACTACCACAACAGCATGCGGTGCAACTACTGCGGGAAATTCTTCAACTCTAAATCATTCCTGGAAGCGCACTTACAATTTGAGTGCGAGCGCAAAAGAATCCTAGGAAACTGTGATGCGTTTGACAAGAAGCTGAAGTGCCATGTGTGCTTCAAGCCTTTCTCCATCATTGTCAAACTAAACTGCCATTTGAAGACTGCCCACAACTTGGGACCGATCTTAGTTAAAAATTCTGCCGACCCACAATACGTGTGCAATTTTTGTTTCTCCGTTTACAGTGAGGAAGAAAAAATGTTGTCGCATCAGAGGATACACTTCAGGCCTCCGTATTTAGGCTGCAAGTTCTGTGACAAGAAATTTGCGACCATTACATTATTCAACAAACACAAGAGGAACCACATGCAAAAGAGCTTCCAGAGCAATCCCATGACTTGTGAGTTGTGTCCGGAGAAGTTTGTATCCATGCAAGACTTTATCACGCATTCCAAAGATGAGCACAATTGTGAACTAGAGTGGATCGTACAACCAGAACAAACTCCCGCGCAAATGTGTGAGCTCTGCAACAAAGAGTTCATTAATATCCACAATCACATGACTTACCATGAGAAGTACAAGTGCAAAAAGTGCAACGAGTACTTTTTCTCAGAGGTATTGTATGCAGCTCATTCCTGCGTCTTAGCCGGCGATGACGAAGACGTCAGAAGAATAACTACGGAAGAGGGGAACTTCACAGTTGGAACTTTTGGCCGGGACGTAGAAGGATCAAAGGATTACGTTGAATGCTCCTTTTGCTTTAAGCCGTACACGGCACATTATTCAAAAGGGAAACACGATTTGAATCATACCAAAGTTACCATGTTTGGTTGTAGATTCTGTAATGGGCGATTCAGCACTATGATCGCGTTCAATTTACATTCTCTGCGCCACAAAGTGAGACACTACACCAATGACCCAATAAGGTGTCGACATTGCAATGAAAGATTCACTCGATATAAACCGTACGTACACCACCTTAGGTCAGTTCACCAGGACAACGAAATCCTGTTGTTCAAGCCACAGTATCCACCGGAAGAATGCAAAATATGCCATAAAACTTTTCCTGCGATTCATCTTCATTACAAAAGTCATTTGCGGTTCCGTTGCCAAGATTGCAAGAAGTACATCTGCTCCGAGCAACTGTTTAAAAACCATTTCTGTAACGATCCAAACGAAGACAAATCTTTAGTGTTTGAATACGAACCCGATGTCCAACATCTGACTATCGGACAGTTTGATATTAGTGAAAGAAGACACGGTCCCGATATCCCAGACGCACCTTACGATGTTGAACCTCAAAGCAGTAATAATGATTATGAAATAGACATTAACGAGTTTGAATTAGACGACTCCGTTTTAAAAAACAATGACGAAACTCATCCTAACAATCCAGACGTTATTGTGTCTATACCCGATGATTTTATTGACGATAACGAGTCTGAGGCTAATTCTCAATCATTTGGTACATTTACTCCTATAATCTCTTCAACGGTCTCACTTAGTCTGCCTATGGATGACGATGATttcatgatcaatcacaacaaaACAGACAATGATACTCAAATGGCGGATGATtccatgatcaatcacaacaaaACAGACCTTGATACTCAAATGGCGGATGATtccatgatcaatcacaacaaaACAGACAATGATACTCAAATGGCGGATGATTCATTAGAGTTGCTAGATGAAAAAAACCTTGATGAATAG
- Protein Sequence
- MSLVLKLSKCRLCLKLGDFYSIFAVDNSIQLSKMAMACSNIKIQEGDGLPEKVCGECVEKLSSAYLFKQQCERSDAELRKSLQLTSGISEIASYGRGSSDSGFSNSTNVSTSKKGSKKRKLQNSTPVPGSSMNNDTLLQESYSVDIHDPLNLEGLHSGNIDHSQSDSNEEDGKCYYCKPCDKSFLTAKGLNVHISHHQKFSSSLASNKEEDSPLLKAQLSKAPVYREESSQDSKSSSKSSTSNPLTCKACNKTFKLSIMLRRHASMCQGSQSRDTSQSPVTLERCSNCSKRFKSNSDLKRHLTITNCGTLVNWTPKGSESSSKITPNRKQAKRKKGPAICSNCDTKFGNFTKMYSHMKMCVKKKTPNVIQCMACSTVYSQMTGLYKHLRKHHLPYDDITVEVPVKEVVVKQEPMDEQESMDEPEPMEEQEEGEEELLRCRECSETFTDQQQLVMHLAAHMANMNDFKSKEKKDATFRFNKNYNCYKCTKPFKYLTSYKNHLRDAHGVTQEEADSIQKQGSIFRCVACKKDFRSHKSLICHQNSVHGKERKLLRDSTSTPAIIKTPNPPNKGIIFFSKSPVKCLICDITLKGLYETKMHNRMHALKNEKTKNEYVCPTCNLSFFNSRMFRIHIKEHNDLVVEQKANIDATEGNDGLEAEEHESDPSQFCAVKIKAEPEDPDDPVHERADGSGQPQRLMVSLGGFKCPTCGKVLDSIKQYKYHTSRNCSRGAPMQLPPPARILPCPTCDEVFNIGSHLKLHIRQHAREALVDPTTIYCKPCKHQAKSYRSFLYHQHWHRRETRNVTPTSFACIVCKENFPTRADYQAHYQQHVKDGEATNIVETYEVNKQVTPYQCHICQKYMPTDVSLKYHTAWHVSSCSMRRYNCEYCDKVFTSKGRHHMHVKMHRQNMPGAFKCHVCGKSMHSEGHYNIHMKMHANAKFKQRINPLSMLNHVSCPICDVKFPYQAKLNRHLKMVHPENKMVKKLDPDGDYLEKKYVCTICCKEFNSERKLLFHKTTHARRMVYIKCSLCGKKSPSMKYHRLHVKAHMAQRFKSDPLKCEHCEETFVKRYSLHLHLFRAHNINHNYIAENNGEQDDDKELKELQCQQCRKILSTESSYQRHLDYHNSMRCNYCGKFFNSKSFLEAHLQFECERKRILGNCDAFDKKLKCHVCFKPFSIIVKLNCHLKTAHNLGPILVKNSADPQYVCNFCFSVYSEEEKMLSHQRIHFRPPYLGCKFCDKKFATITLFNKHKRNHMQKSFQSNPMTCELCPEKFVSMQDFITHSKDEHNCELEWIVQPEQTPAQMCELCNKEFINIHNHMTYHEKYKCKKCNEYFFSEVLYAAHSCVLAGDDEDVRRITTEEGNFTVGTFGRDVEGSKDYVECSFCFKPYTAHYSKGKHDLNHTKVTMFGCRFCNGRFSTMIAFNLHSLRHKVRHYTNDPIRCRHCNERFTRYKPYVHHLRSVHQDNEILLFKPQYPPEECKICHKTFPAIHLHYKSHLRFRCQDCKKYICSEQLFKNHFCNDPNEDKSLVFEYEPDVQHLTIGQFDISERRHGPDIPDAPYDVEPQSSNNDYEIDINEFELDDSVLKNNDETHPNNPDVIVSIPDDFIDDNESEANSQSFGTFTPIISSTVSLSLPMDDDDFMINHNKTDNDTQMADDSMINHNKTDLDTQMADDSMINHNKTDNDTQMADDSLELLDEKNLDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -