Basic Information

Insect: Agapetus fuscipes
Gene Symbol: -
Assembly: GCA_951799405.1
Location: OX637359.1:3141712-3145446[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.27 18 6.5 0.2 2 20 93 111 92 113 0.90

2 18 0.0037 0.25 12.4 3.5 1 23 139 162 139 162 0.98

3 18 0.13 8.8 7.5 1.1 2 22 164 184 164 186 0.84

4 18 0.0044 0.3 12.1 0.6 2 23 406 427 404 428 0.91

5 18 0.05 3.4 8.8 0.8 2 23 555 576 554 576 0.96

6 18 0.032 2.2 9.4 3.5 3 23 584 605 583 605 0.92

7 18 0.026 1.8 9.7 2.1 2 23 640 662 639 662 0.92

8 18 0.00091 0.062 14.3 1.1 1 22 667 688 667 691 0.90

9 18 0.00051 0.035 15.1 0.6 1 23 700 723 700 723 0.97

10 18 8.9e-05 0.006 17.5 0.1 2 23 730 751 729 751 0.97

11 18 0.038 2.6 9.2 2.3 1 23 758 781 758 781 0.95

12 18 0.00023 0.015 16.2 1.4 1 23 787 809 787 809 0.98

13 18 4 2.7e+02 2.8 2.5 1 19 815 833 815 838 0.73

14 18 0.34 23 6.2 1.1 1 13 851 863 851 868 0.85

15 18 0.032 2.2 9.4 0.5 2 23 881 903 880 903 0.95

16 18 0.0036 0.24 12.4 0.2 1 23 909 932 909 932 0.98

17 18 0.002 0.13 13.2 0.7 1 23 938 960 938 960 0.98

18 18 0.0032 0.22 12.5 1.1 1 23 966 989 966 989 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.27	18	6.5	0.2	2	20	93	111	92	113	0.90
2	18	0.0037	0.25	12.4	3.5	1	23	139	162	139	162	0.98
3	18	0.13	8.8	7.5	1.1	2	22	164	184	164	186	0.84
4	18	0.0044	0.3	12.1	0.6	2	23	406	427	404	428	0.91
5	18	0.05	3.4	8.8	0.8	2	23	555	576	554	576	0.96
6	18	0.032	2.2	9.4	3.5	3	23	584	605	583	605	0.92
7	18	0.026	1.8	9.7	2.1	2	23	640	662	639	662	0.92
8	18	0.00091	0.062	14.3	1.1	1	22	667	688	667	691	0.90
9	18	0.00051	0.035	15.1	0.6	1	23	700	723	700	723	0.97
10	18	8.9e-05	0.006	17.5	0.1	2	23	730	751	729	751	0.97
11	18	0.038	2.6	9.2	2.3	1	23	758	781	758	781	0.95
12	18	0.00023	0.015	16.2	1.4	1	23	787	809	787	809	0.98
13	18	4	2.7e+02	2.8	2.5	1	19	815	833	815	838	0.73
14	18	0.34	23	6.2	1.1	1	13	851	863	851	868	0.85
15	18	0.032	2.2	9.4	0.5	2	23	881	903	880	903	0.95
16	18	0.0036	0.24	12.4	0.2	1	23	909	932	909	932	0.98
17	18	0.002	0.13	13.2	0.7	1	23	938	960	938	960	0.98
18	18	0.0032	0.22	12.5	1.1	1	23	966	989	966	989	0.92

Sequence Information

Coding Sequence: ATGGAGTCAGAACCTGAGGGGGACAGAGAGAAGGGAAGGGGCGCAGCGCCACACCCAGGAGCTTGTATTGTCATAAAACGAGGACCAGAAGACAAACGCAAGGAAACCCAAAGAGCCGTAGCTTCCCAAGATGAGACCGTCGACTTGCTGTCATCTGATGACGAGCAACAAAATGTAGCTGCACCAGAGCAAGTGGTGCGTTCCTCTGTGTCCGAGGTAAACAATACACTTAAGGATCCTATTGCCAAATCAGGAAAAGTTCCTACTAGAGTTAAGAAGTGTAGAGGTTGCTTTAAAGTATTTCCTGATCAAATTAAAATGATGTACCACGTAGAAAGATGTGAAAAAGTACTGAAAAGATATGTGTTCAACAGCAGTTCACAAAAGCTGCGTGCTTTATCTAAGGTTGTGATGTATCCATGCTCCACGTGTTGCAAGAAGTTTGTCTCAGAGGAAACCCTGCAGAAGCACCAGCAGACGCAGCATGCAAGGTGCCAGTACTGCCAACAAATATTCAAGACCAGCACTGAGCTGGTCTTCCATAAAAATGAGATGCACAAGCACATTTGTCGAATATGTGGAGATGTCTACCATGCCAAAGAACCTGTAAAGAGGCATTGTGGTGTTCCACAAGGTGAAATAGAAGCAGAAGCTGCTATCCCAGATAAAAATGTTGAGGGAAAAGAAGAAATCGTCAAGCCTACACTACAAGACACTACATCTGGACTTCTTGCGGCTTCTAATGCGCCTGAAGCACCCAGTGACAATGCTAACAAAACAACAAGTACAAATGTTGTTTCTAGTAACGTATCACAACTTCTAGAATCAGGTACTTTTGATCCATTTGCTTACACACAGAGAATGGATGTGCTGGAAAATGCCTGCAGTCTCCTGAAGAAATGTGTATTTTGTTCTATACCATATAAAAACACCAGCAATTGTAAGATGCATGTTTTGTATTGTTGTGAATTGGCAGTTTACATGAAGAAGCGCTATCAGGTTCCGTTGAAAACATGCACCCTGTCTCCTTCGGCATCAGACAAACAAGAACCAGCACCTGAGATGTTAGCTGCTCCACAATCCCAAGCTGTGGCCTCCCATCAGCTGGCTCCTAAGTGCTTACCTCAATCGACCAAATCTAACAACCCCGAGATGGATAAAGCTCTCAACTTCGACTTTGTTGATATTCCCTTCATTCCGCTAGAACCCAAGTGTGAGTGTCTCATATGTGGAGCAAGCACAGCCTCTGCAGAGAGCCTCCTGACGCACATGGAGCTTCATCACAAGAATGTGGACCCTCTGGCAGATGTCATCAAGGAAGAGGACTGCTCCACTCAGCCAGGAGATCAGGAAGAAGAGAATCAAAGTCTGGTACAATCAGAAAAACATGCTGAAACAAAATCAAAGGAACAAAAGGATGTTGTGAAACCAACAGAAAAGGACATCTGCTTGCAATCTAGCAGCATCACCTCTGAGATTTCCAAATCAGCAGGCGTGAAGGTCCGCGTTTCAATGCCAATACGAGGGACAAAAATTCAAAGGGCTACACACATGAAGAAAGTTCATCCCACCATCCTGGACTGCTCTCTGTGTGACCTCTTATTCCAAACTACAGAAGAGCAAGCGCAGCATCTCACCTGGCACTCCAAGTTAGAGGAGATCAAGTGTGAGCGCTGCGGCAAGATGGTCATCGGCCGAATCAAGTACAAATGGCATATGTTACACCATGATGACGAGAATGCCACCCTGTGTCCCATATGTGGATTCAAATGCACCACCAAACATGCCCTGACTTTGCACAACTACAGGATGCACCAGGGCTTGGGAAATGCTCTGTGTGCGGAGTGTGGTATCACTGTGCCCAGCATCATGTACGGCAGGCATCGCTACCTAAAGCACGTCGCCAAGGTGCCAGACATGTGTGACATGTGTCCGCGCGTCTACAGGGAGAAGCGTTTCCTGAACCGCCACAAGCTGGAGTGCCACTCCGGGAACGTGCACCCCTGCAAGACCTGCAACTTGACCTTCTCCACAGGATCTGAATTGGCTCAACATCGTCGGGAGGTGTTCCATGAACCAGCCCCtccaaaaaaattgtatacctgCCAAGACTGTGGACAAGAAATGACCAATCCCTGGAACTTCCGCGCTCACCGACGCTATCAACATGAAAAGCATCTCTTTGTGTCCTGCACAGTGTGCCCCATGAAGTTCCCCTTCGCTCAGAATTTAGAAAAACACATGTTGATGCACCGAGATAATACAGCTGAACATGTCTGCTCCTTCTGCACGCAGCCTTGTGATTCTGCCGAGTCTCTGCAGCAGCACTTGCAGAACATGCATCAGGGAGAGGGCTCCTTCACATGCAGCTTCTGCCAAGAAGTGTTTCATCGCCAAGAATCCCTCATTATCCATGAGCGCATACACACCAACGAGAAGCCTCATGCCTGTAAGGTGTGCTCCAAAACTTTCCAAGATATTGTTGCTTGCAAGCAACATGAAGCTAGGAAGCACAAAATGCATTCTTCCTTGCAAGCCACTGTTCATAAGTATACTTGCCAAGAATGTGGAAAAAGATCGTCCTCTCCCTGTCGCTTACACGTTCAACAACGCACTCAACCTCAAAAGGatcttgttttgtcttgtccAACATGTTCCATGAAGTTCCCCTCGGCAAAGGCAAGAGATAGACACATGCTGAAGCGCCATGGGGTTGAGGCTCAGTTCAAGTGCTCCATCTGCAGGATGTCATTTATTTCCGAGTATCCTTGGGGCGCACACATGCAGACAATGCATCTGGTAGAGCGCCCCTTTTCATGTCAGGATTGTCCAGCTAAGTTCAAGAGCAAGTTCGCTGCTACCCTTCATGAGCGCACACACACAGGCGAAAAGCCTTATGCCTGTAAAGTGTGCTTCAAAACTTTTGGACAGAAATCTGCCCGTAAGCGACATGAAGTTAAAGTGCACAAATTGCATTCTGCTGCTTCTGGCTCCACCTCCTCTCCTGAGTACATGGTCATAGATGAGCCGGGCATAGAGGAGCCTCTGCCTCTACTGGACCAGTCTCCACGAGAAGGAAATCGCGCTGCTGCCTTTATTAAGCACACATACACTGGGCGCTAG
Protein Sequence: MESEPEGDREKGRGAAPHPGACIVIKRGPEDKRKETQRAVASQDETVDLLSSDDEQQNVAAPEQVVRSSVSEVNNTLKDPIAKSGKVPTRVKKCRGCFKVFPDQIKMMYHVERCEKVLKRYVFNSSSQKLRALSKVVMYPCSTCCKKFVSEETLQKHQQTQHARCQYCQQIFKTSTELVFHKNEMHKHICRICGDVYHAKEPVKRHCGVPQGEIEAEAAIPDKNVEGKEEIVKPTLQDTTSGLLAASNAPEAPSDNANKTTSTNVVSSNVSQLLESGTFDPFAYTQRMDVLENACSLLKKCVFCSIPYKNTSNCKMHVLYCCELAVYMKKRYQVPLKTCTLSPSASDKQEPAPEMLAAPQSQAVASHQLAPKCLPQSTKSNNPEMDKALNFDFVDIPFIPLEPKCECLICGASTASAESLLTHMELHHKNVDPLADVIKEEDCSTQPGDQEEENQSLVQSEKHAETKSKEQKDVVKPTEKDICLQSSSITSEISKSAGVKVRVSMPIRGTKIQRATHMKKVHPTILDCSLCDLLFQTTEEQAQHLTWHSKLEEIKCERCGKMVIGRIKYKWHMLHHDDENATLCPICGFKCTTKHALTLHNYRMHQGLGNALCAECGITVPSIMYGRHRYLKHVAKVPDMCDMCPRVYREKRFLNRHKLECHSGNVHPCKTCNLTFSTGSELAQHRREVFHEPAPPKKLYTCQDCGQEMTNPWNFRAHRRYQHEKHLFVSCTVCPMKFPFAQNLEKHMLMHRDNTAEHVCSFCTQPCDSAESLQQHLQNMHQGEGSFTCSFCQEVFHRQESLIIHERIHTNEKPHACKVCSKTFQDIVACKQHEARKHKMHSSLQATVHKYTCQECGKRSSSPCRLHVQQRTQPQKDLVLSCPTCSMKFPSAKARDRHMLKRHGVEAQFKCSICRMSFISEYPWGAHMQTMHLVERPFSCQDCPAKFKSKFAATLHERTHTGEKPYACKVCFKTFGQKSARKRHEVKVHKLHSAASGSTSSPEYMVIDEPGIEEPLPLLDQSPREGNRAAAFIKHTYTGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -