Basic Information

Gene Symbol
HIVEP1
Assembly
GCA_951799405.1
Location
OX637355.1:12766380-12781217[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.0017 0.12 13.4 1.6 1 23 194 216 194 216 0.97
2 8 0.1 7 7.8 1.6 6 21 227 242 222 246 0.87
3 8 0.0028 0.19 12.7 0.0 1 20 482 501 482 503 0.94
4 8 5.9e-06 0.0004 21.2 1.3 1 23 1290 1312 1290 1312 0.99
5 8 3.8e-05 0.0026 18.6 4.4 1 23 1318 1342 1318 1342 0.92
6 8 8.5e-06 0.00058 20.7 0.3 2 23 1776 1797 1775 1797 0.96
7 8 0.0037 0.25 12.4 1.4 1 23 1803 1827 1803 1827 0.91
8 8 0.00025 0.017 16.1 2.1 1 23 1848 1872 1848 1872 0.93

Sequence Information

Coding Sequence
ATGCGATTCGAATTATCACTTGGTCGGGGAGCGGGGAAGGGGGGATTGCGAGatGATCACAGTGAGAATTCTGTGCCAGCATTGCCGGACAAGTCAAGAGAGGAGTTTCACAGCATTTCCAATCAAAGCAGATACCTCCACAAGAAGTTCAAGAAGCTGGCGACCGTGGTGCAGCCAATGCCGGAAAATGGCCACAAAGTGGACGTGTTCCAGAAGCTGTCTGTTCTTCCCTGCGGGGGCCAGAGTTCTCCACGAGACCCTGCTGAAGGCAGCACTCTACCTGCCACCATGAGCACACAGCAGGGAGCCTCGTTAGACCTGACTCCAAACCACACTAGTCCTGCAAACGATGCCAGCTCAATGCTAACGTGGCATAGTTCTACTGAAATAGACGGCACTGGACTCATACGCAAGGATTACGATGAAAGAGCGTCTGTAGTCAAAGAATGCTCCAGTTACAGCGGAAATACTGAGACTACAAACGTCAACGGCTTCGCAAGCAAAAAGTTTGAGAGCGGGGAATACAGAGAAGCTTGTGAGAGTAATTCAAAAGATGCGTCAGGCAGCGGAGGGGGTCGGCATGTTTGTCCCTATTGTAAGCTGAACTGCGCCAAGCCCTCTGTCCTGCAGAAACATATCCGAGCACACACTAATGAACGGCCATatccttgcattccatgcgggTTTGCTTTCAAGACTAAATCAAATCTGTACAAGCACTGTCGATCCAGATCTCACGCTCTGAGGCTGCAGGGAACAGAAGAGATCCCCAACACGGAGGAGGACTGGTCCCTTGGTTCTGAAGCAGACTTGCCGGGAACCAGCAACTCTAGGCCGGAATCCACTTGGAGCTCGGACAAAGGAAGTGTTCAAGGAGATTCTATAGGAATGAATGACAGCTCACCACCAGACTTAGAGGGCACGGACTGCGTGTCGCCATCCAATATGATGACAGGCTTCACCGACTGTAGACCTAAGCCCATTATATATAAACCTAAATTTCATAAGGCTGCTTATtaccaagaagaagaagaaagtccTAGAAGTGTTCTATCACCTAATCCAGAATTCTTAAACCGACATATCTCAAAAATTATATCAGACAATGAAGCTATCGTAGATACATTAGATTCTCCGTTACATAGAAGATATAGTAAGGATAATATTAATCAGAAACACTTAAATGAGATGATATCAATCCAAGACTCCCTCAACTGTGAGAATCAGCCGTTGAATCTTACCAAAAATAGTGAGTCCGAAGAAGCCAATCACAGGAAGAGATGCTGCTCGGAGAGCTTCGCTCAGCCCGAGTCTCTCAAAGGCCAGCTGCACCCCCTGAACCCTGAGGGATCCATCATCAAGGATCTGTTGCTGAAAGCACGAGCCCAAGAAAGTGGCTTGTTACCAGTCACAAGTGAAGATTATGATGCATCAGAGACTCTGTACATTTGCCCACTGTGTAACATCCGCTATAGAAGTGCAGAAAACCTTGAAATCCACACACTTTATTATTGCAAGGGAAATATTGTGTCTTCCAACTCCATGCTGAATGGTTTACGTGATCCCAAATTCTCAAAACCGGAGCACGGCTATGTCAGAAGCAACTCAGTCCACGTCACTCTACCTGAAACTTATAATCCCAACAGCTTAGTGAAGCTAGCCAGCACCACTCTCAAGTCCCCCCTGGAGAGGGGAAACAAGCCAGAGAACATTGTCATCCACAAGAATGACTTCCATGAAACAGTTGCCCCGCTTCCTTCCCCTGGACCTCTCTTGGGAAACACTCGACTGATTGACACAAACAACTCCATGGATACTCCCAAGTCTGCAGTGATGATGAACAGCGTTCCATGCAGCCCGATCCCATCTTTAAAGCGACACACAGAATCTCAATCTTCAGATTACTTCTGTAGGTTTCCCAAGCTCAATGAAGACAGACTTCACACATCGGAAGTGTACAGTCCTCCTACGAAAATACGTCGTGTGGAAACGCCAACGACGCTACGATCTCTGGAGGAGCTGTCCCTGTCTCCCATGCGGCAGAACTCAACATCCCTGCAGATGTTCGGGGGAGAAGTGAAGATCATGGACAACGCGGGAGGAACAATGACCATGAGGATTGACACCATCACTTCACAACAGTCTTCCACGGTGTTGTCTCAAAGTGCAGCGTCTCCCAAACTCCAAGGGCCAGAGACAAGCAACATTGTTGTCAGATCCGGCTTGCATTCTGGTGGCACCATCGTTCACAATCCACCGACACCAAAAGAACCACTTCCGTCTCCACATCCTCAAACACCTCGTCTGCTAGTTTCCATGGCTCCAAATATAACAACTCCTAACTTGACAGTTTCTGGGATTACAGGACCAAACATGACCAAATTTCAATTCCCGCCAAGTGAGTCGTTGTCTGCCTACAATCTGTTAACTCTTCCACCCATCAGTCCTGCTGCGTCACCAAATGCTCCAGCTACCATATTCCATGCAGGGAAACTGATTCCTTATGTCCCAGGAATGCCCGGGCCAAACTCGCTCAACAATCACATGCCTACTATGTTTAATATGTTAAATACCATGCAGGTGTACAAGAAGACTCCGGATAATATCACTACAAAAGACGATAGAAAAATGACAAATGATAGAATAACACTTGATGCATCAACTTCTGAAGATCTTAAGTCGAAGACTCTTCCACCCAGATCCAAGTTAAGAACTCAAAATCATCCGATATTCAATTACACAAAAGATAAGTTTGATGCCAGCGTTAAAATCAATTCTGATCTCAATCCTAAAACAATATTGGTTAATAATTCTTCTCCTAAAGAAAATGTTCCAATCATCAAGATACAATATGAAGATTCCCATCTATCGAGTGGTTCTAAAAGATTAAACATGCCTGGAAACAAGTtagatttaatatttcaaaataaaaacaaaaacattgtaGACTTTTCTCCTCAAAAACTGGTCCGGGAAGATCTACCGAGATTGTCGCTTACGAAACCAGATAAAATGTGTGAATACAACAATTCAGAAAAGGAGAATGCGTCTGTTCCAATAATTGAAAAGAAGATTTTAAGCCGATCGGAATACCGTCAGTTCAATTTTGAAAACTTGATTTCAAAATCTGAAATATTGAACAAGTCACTCGAAGTTTCAACGTGTGAAATGCCGAGCACGAGTGAAAACTGCATCAAAAGCGACGAGAAAAAATCTGAACGTTCGGAAACATCTTACTTTAAGAAATCTGTGAATTCGTTGGCGGAATCCAGCAAGAATGACGTTCAAAAAGTGAAGTTTTTGAGGCCGACTTCGTTGCCGCTGAAACCTGGAACTTTTGTGCCGAAGAGGCATCACGGAATCACTCCAAATGCTAACACGTTGCCGTTGATCTCTCCAGAGACTCCTCGGCCGGCTAAGGCGTATGGCCAGCTGTATCTGAACGGCCATGCTTACACATATTTGGGGCTCAAATGTTCAGCCAGGGTTTACTACTGCACTCTCAACAGACCGCAGCCCACCTATGTGCCCAAACAACATGCTCTCTCAATGTACAGCAACTGgcaaGTTTGTTCGGAGTCTGCACCTCATCCTCTGGGTCTATCGCCAGGCAATGCCATGGCTCTCTACGACTCACGGCACCGGCCACAAAACACGACCGTGGCCAAAATAAAGCACGACCATCTGATGACGCATTCCTCGCAGTGGAGTGCTACGGCAGCCAAACAGGACTCTGATAGTGACGGAAACGAAGACGCCAAAACATCCGGCACCGATTTGGGTGTAAGCAAGTGTGGCAAAGGTGTGACGGGAGGATTTGAGAGCAACGAGGAGTACACGTATGTGCGAGGCAGAGGACGAGGGAGGTACGTGTGCGCCGAGTGCGGAATCCGGTGCAAGAAGCCCTCCATGCTCAAGAAGCACATCCGGACTCACACCGATGTCAGACCTTTCACCTGCAAACACTGCGCTTTCAGTTTCAAGACGAAGGGCAACCTCACGAAGCACATGAAGAGCAAGGCCCACTACAAGAAGTGCTGTGAACTGGGGATCAGTCCATCTGAAGAAGTGGACAACGAGGAGCCCAGCCAGGATATGGGAGAGTCTGAGGAAGATACTGAATCTGAAGATGATGGCAATGAGGCGGAAACAGAATCTAGTGATACAGATTCCTGGAAGTCTCGATTGGAGCACGAGGCTGCTCACTGTCTCTTGTCCCTGTGGGGCGGGCGCCCTGCCCCTGGCCTGCTCACCTCTGCCAGGCCCACCACCTACCCCTACTCGTCCACATCAGAAACACCAACACCCTGCAGCTCAACAGCCATACCCCAACAAAACCCAGCACACACAGACACCACTTCAAGCGTCATAAAGAAGACTTCATTCACAAGCAAAGAAGACCCCGAAGTACGCCCAAACTTCTTCCCATTAGACCAAAGCAAACCTATGGATCTTAGCAAAGGAGATTTCAGTTCTGCGTCAGATATTTTAACTCCCGTCGGAGAACCGAGTCTGCTGGTATCTCTGGCTCGTAGCACGTCTCAGCTGCCTCAACGACGAGCAGATTGGAGGGACGATGAACCTATGCTGCAGGCGTACCTCACGGAGAAGGCCCTTCAGGATTCTCGGATCAAGCAAAGTCAGTACACAAATGGAAGGCCGCGGCAGCTGGATATCAATGCTGTGCTCAGTGACAGTTTAAACTTAAAAAGTATAACAACAATTGATAATACAATTATGACTCAAAGCTCCAAAGTAAAAACCTCGTGTGTAATATCAGAATCACCTGCAGTTATTGTGCGGGCTGCGATAAAACTAGATGTTCCCATTCCTCAAATGCAAACTTCTCAATTGCAGACTTCCACAGAAAGCTCGGCCATAGAAACGTTAGCGGAAATAGCGGCTAGCTCAATGCGGTTGTCTACTCCTCCGCTTACAGTCAGTTCTGAAAAAATAACCACAACCGCTGCGACATCTGAGTCCTCGGTCAACACTGATAATGCAAAGTTTGTTGCTTCTGAATACTTGAAAGTTGTGAGTGCCAAGTCAAATATAGAGACAGACAATAGCCATTTAGGGAATGCTTCTGATAAATTAAGTGAGAAGCTATCTAAAGAAGCCAGCAGTCATTTGAATAGTAATGATGGAAATATCAGCAATGAAAAGGACAGCGAAGTAGCAAAGCTGAATCCTGATAGCATAGGAGTGGCCCGCAAGGTGGTTGTCGGAGCAGGAGGCCTGGGCTTCAAGCTGACAGCTCCGTCTGGGGAATACTCGTCCGCAGTAACGTTTGCTAAAGGACATCTTACTGAAGATGGAAGATCTGTGTGTGTGGTTTGTAATAAGACATTTTCAAAACCTTCACAACTGCGTTTACACATCAACATCCATTACATGGAGCGGCCGTTTCGTTGCAGTGCGTGCGCTGTCAGCTTCCGGACTCGAGGTCACCTCCAGAAGCACGAGCGCTCTGGATCTCATCACAATAAAGTGTCCATGACTTCAACGTTCGGTGCCGCGACAACCACTAATCCACGGCCTTTCAAGTGCTCGGACTGTGGAATTGCATTTAGGATACACGGCCATCTGGCGAAGCATCTCCGAAGTAAAATGCACGTCATGAGATTAGAATGTTTAGGGAAATTACCTTTTGGGACATTTGCCGAGATAGAACGAGCAGGAGTAAGCTTGACTGATATTGATACAACAGACTGCGATAATTCTTTGGCAAGTTTGCAAATCTTGGCTCAGAAACTACACGAGAAAGACCCCACGAAGTTGGAAAAGTGGGATCCGACGACGATGGCGCCTCCTCTGCTGCCTCCCGGTGCAGACTCCTCAGATGAAGAGGAGCAGGACACGGATCCCACCAGCCCCAACGATCATATCACTCCTTCCCCTTCCTGTGAACCCAGAACTATACACGACAGTGACAGTACGGATGAAGTTCATGTAAATCATAGTGCCACAGATACTTAG
Protein Sequence
MRFELSLGRGAGKGGLRDDHSENSVPALPDKSREEFHSISNQSRYLHKKFKKLATVVQPMPENGHKVDVFQKLSVLPCGGQSSPRDPAEGSTLPATMSTQQGASLDLTPNHTSPANDASSMLTWHSSTEIDGTGLIRKDYDERASVVKECSSYSGNTETTNVNGFASKKFESGEYREACESNSKDASGSGGGRHVCPYCKLNCAKPSVLQKHIRAHTNERPYPCIPCGFAFKTKSNLYKHCRSRSHALRLQGTEEIPNTEEDWSLGSEADLPGTSNSRPESTWSSDKGSVQGDSIGMNDSSPPDLEGTDCVSPSNMMTGFTDCRPKPIIYKPKFHKAAYYQEEEESPRSVLSPNPEFLNRHISKIISDNEAIVDTLDSPLHRRYSKDNINQKHLNEMISIQDSLNCENQPLNLTKNSESEEANHRKRCCSESFAQPESLKGQLHPLNPEGSIIKDLLLKARAQESGLLPVTSEDYDASETLYICPLCNIRYRSAENLEIHTLYYCKGNIVSSNSMLNGLRDPKFSKPEHGYVRSNSVHVTLPETYNPNSLVKLASTTLKSPLERGNKPENIVIHKNDFHETVAPLPSPGPLLGNTRLIDTNNSMDTPKSAVMMNSVPCSPIPSLKRHTESQSSDYFCRFPKLNEDRLHTSEVYSPPTKIRRVETPTTLRSLEELSLSPMRQNSTSLQMFGGEVKIMDNAGGTMTMRIDTITSQQSSTVLSQSAASPKLQGPETSNIVVRSGLHSGGTIVHNPPTPKEPLPSPHPQTPRLLVSMAPNITTPNLTVSGITGPNMTKFQFPPSESLSAYNLLTLPPISPAASPNAPATIFHAGKLIPYVPGMPGPNSLNNHMPTMFNMLNTMQVYKKTPDNITTKDDRKMTNDRITLDASTSEDLKSKTLPPRSKLRTQNHPIFNYTKDKFDASVKINSDLNPKTILVNNSSPKENVPIIKIQYEDSHLSSGSKRLNMPGNKLDLIFQNKNKNIVDFSPQKLVREDLPRLSLTKPDKMCEYNNSEKENASVPIIEKKILSRSEYRQFNFENLISKSEILNKSLEVSTCEMPSTSENCIKSDEKKSERSETSYFKKSVNSLAESSKNDVQKVKFLRPTSLPLKPGTFVPKRHHGITPNANTLPLISPETPRPAKAYGQLYLNGHAYTYLGLKCSARVYYCTLNRPQPTYVPKQHALSMYSNWQVCSESAPHPLGLSPGNAMALYDSRHRPQNTTVAKIKHDHLMTHSSQWSATAAKQDSDSDGNEDAKTSGTDLGVSKCGKGVTGGFESNEEYTYVRGRGRGRYVCAECGIRCKKPSMLKKHIRTHTDVRPFTCKHCAFSFKTKGNLTKHMKSKAHYKKCCELGISPSEEVDNEEPSQDMGESEEDTESEDDGNEAETESSDTDSWKSRLEHEAAHCLLSLWGGRPAPGLLTSARPTTYPYSSTSETPTPCSSTAIPQQNPAHTDTTSSVIKKTSFTSKEDPEVRPNFFPLDQSKPMDLSKGDFSSASDILTPVGEPSLLVSLARSTSQLPQRRADWRDDEPMLQAYLTEKALQDSRIKQSQYTNGRPRQLDINAVLSDSLNLKSITTIDNTIMTQSSKVKTSCVISESPAVIVRAAIKLDVPIPQMQTSQLQTSTESSAIETLAEIAASSMRLSTPPLTVSSEKITTTAATSESSVNTDNAKFVASEYLKVVSAKSNIETDNSHLGNASDKLSEKLSKEASSHLNSNDGNISNEKDSEVAKLNPDSIGVARKVVVGAGGLGFKLTAPSGEYSSAVTFAKGHLTEDGRSVCVVCNKTFSKPSQLRLHINIHYMERPFRCSACAVSFRTRGHLQKHERSGSHHNKVSMTSTFGAATTTNPRPFKCSDCGIAFRIHGHLAKHLRSKMHVMRLECLGKLPFGTFAEIERAGVSLTDIDTTDCDNSLASLQILAQKLHEKDPTKLEKWDPTTMAPPLLPPGADSSDEEEQDTDPTSPNDHITPSPSCEPRTIHDSDSTDEVHVNHSATDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-