Basic Information

Insect: Agapetus fuscipes
Gene Symbol: RREB1
Assembly: GCA_951799405.1
Location: OX637352.1:3765965-3782647[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 7.1e-05 0.0048 17.8 0.1 1 23 92 114 92 114 0.95

2 14 7e-06 0.00047 20.9 1.5 1 23 120 142 120 142 0.99

3 14 2.5 1.7e+02 3.4 0.0 2 23 209 232 208 232 0.90

4 14 0.04 2.7 9.1 2.2 2 23 238 260 237 260 0.94

5 14 3 2e+02 3.2 0.4 1 22 316 337 316 337 0.92

6 14 0.044 3 9.0 0.1 1 23 483 505 483 505 0.97

7 14 0.0014 0.096 13.7 0.9 1 23 514 536 514 536 0.99

8 14 0.00079 0.054 14.5 2.1 1 23 542 565 542 565 0.97

9 14 0.0011 0.078 14.0 2.8 1 23 998 1021 998 1021 0.96

10 14 0.00039 0.026 15.4 1.3 2 23 1345 1366 1344 1366 0.97

11 14 0.027 1.8 9.7 5.1 1 23 1372 1395 1372 1395 0.97

12 14 0.0018 0.12 13.4 0.6 1 23 1439 1463 1439 1463 0.96

13 14 0.019 1.3 10.1 0.4 2 23 1650 1671 1649 1671 0.94

14 14 0.021 1.5 10.0 5.9 1 23 1677 1699 1677 1699 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	7.1e-05	0.0048	17.8	0.1	1	23	92	114	92	114	0.95
2	14	7e-06	0.00047	20.9	1.5	1	23	120	142	120	142	0.99
3	14	2.5	1.7e+02	3.4	0.0	2	23	209	232	208	232	0.90
4	14	0.04	2.7	9.1	2.2	2	23	238	260	237	260	0.94
5	14	3	2e+02	3.2	0.4	1	22	316	337	316	337	0.92
6	14	0.044	3	9.0	0.1	1	23	483	505	483	505	0.97
7	14	0.0014	0.096	13.7	0.9	1	23	514	536	514	536	0.99
8	14	0.00079	0.054	14.5	2.1	1	23	542	565	542	565	0.97
9	14	0.0011	0.078	14.0	2.8	1	23	998	1021	998	1021	0.96
10	14	0.00039	0.026	15.4	1.3	2	23	1345	1366	1344	1366	0.97
11	14	0.027	1.8	9.7	5.1	1	23	1372	1395	1372	1395	0.97
12	14	0.0018	0.12	13.4	0.6	1	23	1439	1463	1439	1463	0.96
13	14	0.019	1.3	10.1	0.4	2	23	1650	1671	1649	1671	0.94
14	14	0.021	1.5	10.0	5.9	1	23	1677	1699	1677	1699	0.98

Sequence Information

Coding Sequence: ATGCAAGACATGTCGTGCCTCATCACGGAGCAGGCCAGCTCGCCTCCCAGGGTGCTCCGGTCCTCAGATGTTTCCCACGAGAAGTCCAGCACTGCAGACGCCAAAGTCAAGAACTCACCAAAGAGCCAGAAGAATGAACCTTCAACCAAGAGACGCGGTGCACCAAACCACGAAGATCCACCAAGCAAAGGAAACCAAGAGACCAAGAAAGAAGTAGCCAAGGAATCTCCGCAGCAGCCCAAAGCAGAAGTCGACGATGAGTGCTTGAAGTCGTTTCCTTGCAAAGTATGCGGTAAAGTGTTGTCTTCGAATAACAGTCTGGAGAAGCATTTGGCCGCGCACAACGGAGAGAAGCCGTTCCGCTGCAAAACCTGCGACTTGACCTTCACAACCAACGGCATGATGCTGCGGCACATGAGAGTGCATCGGCAAGCTCAAGGCCATGGCTCTGATACTGATGAAACAGACGAGGACACCAAGAGTACGTTGTTACCGCCACGGAGCAGAAAGCGGAGACTGGAATTCAACAACAACGATAAGAATGTCGCAAACGGCAGCGCGGACAACAGCTCGGATGAAGTGAGGGCAAACAGGAGGAAGCAGAAGAGCAGCCACCAGAGTTTGCAATGCCCTGTGTGTGAAAGGGAAGACTTTGCGTCTGTGAACGCTCTGGAAACACACATGGAAGAAGACCATCCGGATTACCTGATTAAATGCACATCTTGCAGCATCAGCTTCAAGAATCATCGAGCTCTGAATCTGCACCGCTTCATGGTTCATCCTGTCGATCGTAAAGATGCTGACACTCTCGGGAAGAAGCTGAACGTGAATTCCGTTTCAGGGTTCAACGATTGCACTTTCATTGATTTCTCGAGTGACAAGTTTCCGCACATTGCAAAAGCCATGTGTGAAAAGAACGTACACAAATCAGTTACAGATCAGACATTCAGGTGCGAGTCTTGTTCCAGAGACTTTCCTTGTGAGAGCGCTCTGGAGATCCACGCCAAAACCTGCAACGACTTCATTCCTCAATCTGTAGAAGACAGTAACGAGTCAGCTGCTAAAAGGCGAAGGCATTCCAACAGTACAGATGAAGAGATTCGTCGAGACGACTTCTTTGCTAATCTGGACTTGCAAAACAAGTCACCAGGATTTGCTCAACTTCCAAAAACAATGGTGGGGCTGCGAAAACCAAAGATGCACAACGATTATTACTCGATGACCAAAGAAAACATGAACCGACCACCCGTAGAAGACTTGGCGGATATTCAGTCAATTCTATCAGTCACTTCTTCTGGTGGACTCTTAGGACATCTGACTCAAAAGTCCAATGACGGAAACATCAGCAGTTCAGCTGATCAATCTAACAAGAACTGCGATAATGACCACGAGGAAGTTCAAGATTTATTTGCTGCAGAATTCCGTAAGATGAAACTTCGTGGGGAATTTCCGTGCCGCCTGTGCACGGCTGTGTTCCCTAATTTGAGGGCCCTGAAGGGACACAATCGTGTGCACCTGAGTGGCAACGGTCCAGGACCTTATAGATGCAACATGTGCCCACACTCCTCCTTGGACAAAGCTGCTCTAGTTCGCCACATGAGAACACACAACGGAGATCGACCTTACGAATGTGGCGTCTGCAACTACGCCTTCACCACCAAAGCCAATTGTGAGAGACACCTCAGAAACAGACACTCAAAAGTCACTAGGGAAGAAGTCAAGAGGTCCATCATATACCATCCGTCCGAAGATCCTAACAATGATGAGGTCAACACCAAACTCAATATTTCCAGAGAAGAAATCAAGAGATCTATGATCTTTGGAACACCAGAATCTGATAATCATACTGTGGAAGATGTTGACAGGCGCCCTGTGGATGTTTCTACGCCATTGTCTCATTTCAACAGGGAGCCACCTCCAAGCTTCAAAGAGCACATTGAACGTCTCTCAATTCCATTGCCCAGAGATCTGTCCATTGTGATTCCTCAGCCCAGAGACATCATGAGGGCTCACTGCTCGATAGAACCAGTCTGCAAACCACCTCAACCAACAGAAGAGGTGGTGCAACCGAGGATCAAAGTCAAAGGTATCGGTCAGCTGATTCAAATACCAGAATACACTGTGGAGTCTGACTGCGAAAGGGAACCAGATAGCGATGACGATGAAAATGGGGACGATGGTTATTCAGATAAGGGTGTGAATTATTCCACTGAAGCTCCAATGGATTTAAGCAGATTTGATGCCCAACAGGATGTGCTGGATCTCAGTAAAAAGAAATCCGACCCTAAAATGGATAACTCACTTGAGAGAAGTGAAAATGATGATTACATCCCCAAAACAATTGAATTCAACAATAACCACACGtctaacatatttgaaaaaacacaaCAGTTCCTCCTTGCACGACAGCAACTGCTTAACGGAGTCCAAATGCAAAAGATTGATCCAGCTGCTGGTTTCTACGCAAACCAATTGTCTCAATTGTACCGTTCTGGTGCCACATTCCCAGGACTAGGCATTCCACCTGCATTTCCATTAAACCCGTACTTCCTCCAACCTCATCCCTTGCTGCCTCCGACTGCCAGTCAGCAAGATATTGCAGAGATGAAGGAAAGGATCCAAATGGAGATCATCAGAGGTCTCAAGCTCTCCGGAGGTGGTCTCGTCGGGTTGGACCATGGAAACATGACTCTTGCTCAAGAGCGACTCCAAGCTTTTCATCAGAACATCAACATGGCTGCGAGTCCTGACTTGAAACCGCGCACCCCAACACCTGTCATCAAAATGGAAGAAGATCTGAAACCACAACTTCACATTCATACAGATGTCCCACCAAGCGCATCTTACTCCAGTCCCATCATGGCATCGCCCAAATTGCAACAAAAGAAAGAAGCCGTGGTCACACACAGTCCCAATTCCGTCAAAATGGTGATCAAGAATGGTGTTTTGATGCCCAAACAGAAACAACGTCGGTACAGAACTGAGAGACCATTTTCTTGCGAGCATTGCTCAGCCAGATTCACTTTACGGTCAAACATGGAGAGGCACATTAAGCAACAGCATCCACAATACTGGTCGCAACGTCAAAGATCCACCATTGGAAACCTGCCAAGAAAAAACTCAGCAACTCTGGTGCCTCAAAATATAACAGTACCAAGTATCAACTATGAGAATAGACTGAGCTACATTAAGAACATACACGCAAGCATGGAACCTCAAGGTGTTCAACAGATGAATTCTGAAGATAAAGACTCGTCAGCCAACAAACCATACTCGATGATATCAGATCAAGTGAAGTATGCAATTCTAGCTCAACAACTGAAGTCCCATCCGAATGTGTTTGCTCAACAGCAAAGCAAGGATCTGCAGCAAGCCAATAGGGTGCTGGAAAACGGTGATCTTGAAGAGGAAGACGAAGACGACGCTCTTATAATTGACGAGGAAATCAACGAAGACAGCAAAGGTGGATCCATCAAGGACGGAATCACCGTCGACAGTGTGAAAGAAAATGTTCAAGTCAACGAATCAAATCTCATGGCAAAGAAAGTGGCTGAGGAGATTTTGATTGGCGTTTCGGCGGCAAAAACTCAGCACCACGACATGGCAAAGGATTTTGAATGGAAAATTGCCGGAAACCTGATCAGCAAGAACCCGCAAAACGCAATCATCCCGACGTTTGTCTCGCAGATTGGACTTTTGAAAGACAAGGAGAACCAGGGGCAGAACAATTCGTCGAGATCTGAAGAAGCCGACTTGGTTCCCGTGTCCAGGCTCCTGGTGAACTCGCAGATTCCTCTGGGGAAGTACTTCAAGGGAGAGTTTGCTGGGGCGGGGACGGATGCCCAGCGACAGGATATCATGCATCCTGCGGGGGAAGGCTCAGAGGAAGACGAAGAAGGACTGGTGGCGTCTTCCGGATCAACCAGCGAAGGGAACATCTCAGGCAGTGATGAGAACAGATCGGAATCCGAAGCCACCACCCAGGTGCCTCAAAAGAAGAAGTCAGCCTACAGTCTGGCCCCGAACCGCGTCTCTTGTCCGTACTGCCACCGGAAGTTCCCCTGGTCATCGTCCCTGCGTCGCCACGTCCTCACCCACACGGGTCAGAAGCCCTACAAGTGTCCGCACTGTCCCCTCCTCTTCACCACAAAATCTAACTGCGACAGACACTTGCTGCGGAAGCACGGCGCACAAACGTCCCCTCCAAGCGGAACCACGTCGACGGGCAGTCCTAACAATGCCGTTCCAGACGCCATGCCCATCCCAGGAATGGGAAACCAGGCGTTCTTGATGAGAAACGTGCCGGAGAGGCCGTACAAATGCGCCGGGTGCCCCAGCAGCACATTCTCTTCGCTCAGCAACCTGAAGAAACACATGGCTTCGAAGCACGGCTTAAACGTCGGCGATTGCACGGAATCCGATGACGCCAAGTGCGATGAAATTGACGAATCGTCAAGGCCGGCTAGCAGGGCTGATAATGAAAATGTCTTTACTTCAGACGATGAAAAAATGAGTTCGGGAGAGTTGAAAAAGTTTGAATTGGACGTTACAACTGATAAGTCTGTTGTAAATTTGACGAGTGAATCGTTGAATAAGACAAACACAGACTGGGAGAGTCAGATTTCTACATCGTCAAAGTGCAGCCCGTCGCAGAGTATTTCTCAAGACATTTCCGGGATACAAAACTGTTCTGATCTTCCGTTCAAGTGTCATCTGTGTGAGGGAAGCTATGCCGAGAGACAGGATTGCTTGGATCACATCAAGGACTTCCACAGCAGTGAGTTTGAGCTTCTGATGTCCAAGGGCGCGCTGGAGACCAGCCTTCCTTCCGAGGACCTTCCCACCAGTCCTCCTGATCACCGCAGCGAGCCGGGGGAGGATCAGGTCAGCGAGGAGAATCCAGAACAGCTGAGGGGGAAGTTCCCTGATTATGCCAACAGAAAGGTGGTGTGCGCGTTCTGCATGCGGCGCTTCTGGTCAGCGGAGGATCTGCGCCGGCACATGCGCACGCACACCGGCGAGCGGCCCTTCTCCTGCGACGTCTGCCGGCGCCGCTTCACCCTCAAGCACTCCATGCTGCGCCACCGCAAGAAGCACCAGCACCGCCCGCACAACAACCAGACCAACTCGGACGAAGACTCCCCCAACATGTCCACTTCCTCTTCCTACATAAACTCTTCATCCACCACACAAGCGTCGCTGCAGTCCTTCTCGCCAAACTCGTCAAACTACGCTCACATGAAAAATACGTCAACGCCTATTGTTTCAAAACTAGCTTTGACTCTGAACGGATATCAGATGGCAATCAACAATAAAGCGACGTCGGCGAGTCCTGAAATACCGAGCAACGTAAACAATAACAATTCACCTCCGTCTGTAGCAACAGATAACAAATCTAAATTGATTGCAATGAAGAAAGCGAAGGAAGAGCAAGGTATGGGAATGCTGACGAGAAACGCACGCTATTCTAGCGATGACGCCGCCGCAGCCGAAGTTCAGGATAACGAGATTGAGTCGGGTAACGATTTGATGTGTAACTTGTTGGGTATCAGCGACAGGAAGATGATCAGTAAGCTGTTGTCGTGTCCGGACGAGGCGGCCAAATTGCTCGGTGTGAACAAGTGA
Protein Sequence: MQDMSCLITEQASSPPRVLRSSDVSHEKSSTADAKVKNSPKSQKNEPSTKRRGAPNHEDPPSKGNQETKKEVAKESPQQPKAEVDDECLKSFPCKVCGKVLSSNNSLEKHLAAHNGEKPFRCKTCDLTFTTNGMMLRHMRVHRQAQGHGSDTDETDEDTKSTLLPPRSRKRRLEFNNNDKNVANGSADNSSDEVRANRRKQKSSHQSLQCPVCEREDFASVNALETHMEEDHPDYLIKCTSCSISFKNHRALNLHRFMVHPVDRKDADTLGKKLNVNSVSGFNDCTFIDFSSDKFPHIAKAMCEKNVHKSVTDQTFRCESCSRDFPCESALEIHAKTCNDFIPQSVEDSNESAAKRRRHSNSTDEEIRRDDFFANLDLQNKSPGFAQLPKTMVGLRKPKMHNDYYSMTKENMNRPPVEDLADIQSILSVTSSGGLLGHLTQKSNDGNISSSADQSNKNCDNDHEEVQDLFAAEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRVHLSGNGPGPYRCNMCPHSSLDKAALVRHMRTHNGDRPYECGVCNYAFTTKANCERHLRNRHSKVTREEVKRSIIYHPSEDPNNDEVNTKLNISREEIKRSMIFGTPESDNHTVEDVDRRPVDVSTPLSHFNREPPPSFKEHIERLSIPLPRDLSIVIPQPRDIMRAHCSIEPVCKPPQPTEEVVQPRIKVKGIGQLIQIPEYTVESDCEREPDSDDDENGDDGYSDKGVNYSTEAPMDLSRFDAQQDVLDLSKKKSDPKMDNSLERSENDDYIPKTIEFNNNHTSNIFEKTQQFLLARQQLLNGVQMQKIDPAAGFYANQLSQLYRSGATFPGLGIPPAFPLNPYFLQPHPLLPPTASQQDIAEMKERIQMEIIRGLKLSGGGLVGLDHGNMTLAQERLQAFHQNINMAASPDLKPRTPTPVIKMEEDLKPQLHIHTDVPPSASYSSPIMASPKLQQKKEAVVTHSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWSQRQRSTIGNLPRKNSATLVPQNITVPSINYENRLSYIKNIHASMEPQGVQQMNSEDKDSSANKPYSMISDQVKYAILAQQLKSHPNVFAQQQSKDLQQANRVLENGDLEEEDEDDALIIDEEINEDSKGGSIKDGITVDSVKENVQVNESNLMAKKVAEEILIGVSAAKTQHHDMAKDFEWKIAGNLISKNPQNAIIPTFVSQIGLLKDKENQGQNNSSRSEEADLVPVSRLLVNSQIPLGKYFKGEFAGAGTDAQRQDIMHPAGEGSEEDEEGLVASSGSTSEGNISGSDENRSESEATTQVPQKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPYKCPHCPLLFTTKSNCDRHLLRKHGAQTSPPSGTTSTGSPNNAVPDAMPIPGMGNQAFLMRNVPERPYKCAGCPSSTFSSLSNLKKHMASKHGLNVGDCTESDDAKCDEIDESSRPASRADNENVFTSDDEKMSSGELKKFELDVTTDKSVVNLTSESLNKTNTDWESQISTSSKCSPSQSISQDISGIQNCSDLPFKCHLCEGSYAERQDCLDHIKDFHSSEFELLMSKGALETSLPSEDLPTSPPDHRSEPGEDQVSEENPEQLRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDVCRRRFTLKHSMLRHRKKHQHRPHNNQTNSDEDSPNMSTSSSYINSSSTTQASLQSFSPNSSNYAHMKNTSTPIVSKLALTLNGYQMAINNKATSASPEIPSNVNNNNSPPSVATDNKSKLIAMKKAKEEQGMGMLTRNARYSSDDAAAAEVQDNEIESGNDLMCNLLGISDRKMISKLLSCPDEAAKLLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -