Basic Information

Insect: Agapetus fuscipes
Gene Symbol: -
Assembly: GCA_951799405.1
Location: OX637347.1:6557449-6570564[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.5 3.7e+02 2.4 1.5 1 23 249 272 249 272 0.81

2 8 3.9e-05 0.0026 18.6 1.4 1 23 383 406 383 406 0.94

3 8 0.0064 0.43 11.6 3.8 1 23 606 628 606 628 0.98

4 8 5.9e-05 0.004 18.0 0.3 1 23 634 656 634 656 0.98

5 8 4.3e-05 0.0029 18.5 0.6 1 23 662 685 662 685 0.94

6 8 5.2e-07 3.6e-05 24.5 1.6 1 23 691 713 691 713 0.98

7 8 1.7e-06 0.00012 22.9 2.4 1 23 719 741 719 741 0.99

8 8 2.4e-05 0.0016 19.3 2.1 1 23 747 769 747 769 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.5	3.7e+02	2.4	1.5	1	23	249	272	249	272	0.81
2	8	3.9e-05	0.0026	18.6	1.4	1	23	383	406	383	406	0.94
3	8	0.0064	0.43	11.6	3.8	1	23	606	628	606	628	0.98
4	8	5.9e-05	0.004	18.0	0.3	1	23	634	656	634	656	0.98
5	8	4.3e-05	0.0029	18.5	0.6	1	23	662	685	662	685	0.94
6	8	5.2e-07	3.6e-05	24.5	1.6	1	23	691	713	691	713	0.98
7	8	1.7e-06	0.00012	22.9	2.4	1	23	719	741	719	741	0.99
8	8	2.4e-05	0.0016	19.3	2.1	1	23	747	769	747	769	0.96

Sequence Information

Coding Sequence: ATGAGAACCATCGAAGGAAGTTTATTGAATGAGCCTAAAACTGTACAAAATGTCTCCCATTACCTCTCACCCCATCACGCTACTGCCGAAGACAGTGGAGGGGGCGATGGACAGTTGTCGTCGGACGGCTGGGGCGTGGAGCTGCTGGGTAGCGAGGAGGGGGTGGCCAACGCCGCTGATCAGCTCTCTGATGATGACCGACGGCTGGCGGCTGCTCTGGAAGCTGTGCAGTTTGTGCAACAACACAATCGGCACCCCATCATGCATGACCTCGGACAAGTGATCAAAGTTGAACAAGTTGAACTGAGAGAATCAGATTTGGTGGAAGTTCAAAACCTTCAATCTCTCCCTTCATTGGCCCCATTGAAGAATGGGCAGGATTCTGTTTGGTATCACATCAAAACAGCTGACCAATATCCTAAAGGGTTTAAGgGAATCGAAGAAGACACGTCTGCCATTGAAGCAGACGACATTGAAATAGAAGTTCATGAGTCATCTCTGATTCAGAACAAGCAGCAGCAACAACAAAGCAAAAAGAgcttaccacacaaaaagagaATATCTAAAAagctaaaaaaacatattccaCACATTTTACAAATGTCCAACTCACGTGGCTCCGTACACGATCTTGATGATGACAAATTAATGCAAGACACTGTGACAAATGAGGTCTTAAACAGAACTGAACATGGCATCTCCTCATCACAGATTGATTCCGCATCGCATGTGAATAGAGCCATGTTCATATGCCAGTTGTGTGGAGAATACTATGGGTCGAATCAAATTCAATTTTTTCATCATTTAAAGGAACATTATGAGCCCCATAGCAACAGTATTATCATTGAAAGTTCAATAGGTAATATACAAAACGATGCGGATGCAATTGAAATCGATAAGATGGAAGGCAGTATGGTAGTGGCAAATGCTCCTCTACCAGAAGCGCTCGTAGAATTGTCTCTAGAAGGAACTGTCTCAGATAAGACATCATTGTACGAGTCTTCTGACAAACTTCCCGTCTATCAGACGTCTGACAAAAACTTCTTCAACGAACCCAAGTCCAGTGTGTACAGCTCAGACAAATCTGAAAATATGTTCCAGCAGCCACAGAAACAAGACAATATGTATGTCAATATTGAGAAGTTGTATTCTTGCACACAATGCCCCAAAACATTCAGGAGACAGAGGCAGTATGAAATACATTCACGGGATGCGCACTCCAAGGTGGATGAAATGAGTGAGTTTAGTGATCCTGAAGATTTGATGGAAGGTATAAATGTTGTGGTGGAGCCGGAAGCCGAGGACTTCCTGCAGGACGATGTCTCCCAGGACTCCAACACCATACTTATTCAATCTTCAGATGGGACACAGGAGCAGTACATACTGCCTCATCTGCAAATAGAGAATGGCCAGGTTCACCAGCTGCATTTGAACTCAAAGCAATGGTGCATCAAGCAGTGCCTTGATGATGCAGAAAATGATGGCAAGAATACATTAACCATCGAGGAAACGGGTAATGACAATAATAGTCAAACTACTATCCACGAATTAAACCAAAAGTCGATCGAAGAAGTGATTTGCCCATTGTGTGGAGGAAGTCTTCCCAGTAGAGACTATCTTGAACATGCCCAGCAATGTCACATGAGACTGAAAGAGCAAGTCTTGAAACACAAGATGGAAGTTGAGGCAGCTAACTATGCCGATGTGGACACAGATCATATGATAGAAAAAGAGGAATGTGAAGTTGAAGAAGTTGAAGAAACCGTAGAGACAGTAAGTGCAAAAGAACCAGAAAACACGATCAGCAAGGGAGCTTACTCGTGTGCATACTGCTCAAGGCAATTCAAACACAAGAATTCCATGATCTATCATTTACTGTCTCATAATGGGAACAGGCCATATGAATGTGATGTCTGTCAGAAAGCTTTCTTTTCAACTGGTGCTCTGAAAGTTCATAGGCGTTTACACAGCGGGGATAAGCCATACAAATGTGAAGAATGCGGAAGGCTCTTTCGTCAGTGGGGAGATCTCAAGTATCATTTCACGTCAATCCACTCTAATCTGAAACAACACCAATGTGAATATTGTGGAAAAGACTTTGCTCGTAAATATTCATTGATCGTTCATCGGCGGATTCATACGGGTGAAAAGAATTATAAATGTGAATTCTGTGATAAAACATTCAGAGCTAGCTCTTACTTACAAAACCATAGAAGAATACATACAGGTGAAAAACCTCATGCTTGTTCAGTGTGTGGGAAAAGGTTTAGAATGAAGGGAGACATGCGGCGACATTTATCAACACATTCAAAAGAAAAAGTGAAGTTCACATCTGACAATGAAGGCGATACAGTGCCAGAAAAGGAGCCTCCTAAACGCAAGACCAGGTCTTCCGCAGCCGTGACCGCAGAGATGAAAGTGGAAAAACAAGAAGATGCCTCGGAGAATGGGAAAGATGACAGCAGCGATGGAAACAAGGCTCAAAATGCCAACATGATACAGTCATCCACCAACGAAAACATTTTACCCGATGAAACAAGGCTTCCGGCTAATTTTCCACTAGACGCCAATGGTGCCATGTATGTGTGGCCTGTCTTCATAACTTAG
Protein Sequence: MRTIEGSLLNEPKTVQNVSHYLSPHHATAEDSGGGDGQLSSDGWGVELLGSEEGVANAADQLSDDDRRLAAALEAVQFVQQHNRHPIMHDLGQVIKVEQVELRESDLVEVQNLQSLPSLAPLKNGQDSVWYHIKTADQYPKGFKGIEEDTSAIEADDIEIEVHESSLIQNKQQQQQSKKSLPHKKRISKKLKKHIPHILQMSNSRGSVHDLDDDKLMQDTVTNEVLNRTEHGISSSQIDSASHVNRAMFICQLCGEYYGSNQIQFFHHLKEHYEPHSNSIIIESSIGNIQNDADAIEIDKMEGSMVVANAPLPEALVELSLEGTVSDKTSLYESSDKLPVYQTSDKNFFNEPKSSVYSSDKSENMFQQPQKQDNMYVNIEKLYSCTQCPKTFRRQRQYEIHSRDAHSKVDEMSEFSDPEDLMEGINVVVEPEAEDFLQDDVSQDSNTILIQSSDGTQEQYILPHLQIENGQVHQLHLNSKQWCIKQCLDDAENDGKNTLTIEETGNDNNSQTTIHELNQKSIEEVICPLCGGSLPSRDYLEHAQQCHMRLKEQVLKHKMEVEAANYADVDTDHMIEKEECEVEEVEETVETVSAKEPENTISKGAYSCAYCSRQFKHKNSMIYHLLSHNGNRPYECDVCQKAFFSTGALKVHRRLHSGDKPYKCEECGRLFRQWGDLKYHFTSIHSNLKQHQCEYCGKDFARKYSLIVHRRIHTGEKNYKCEFCDKTFRASSYLQNHRRIHTGEKPHACSVCGKRFRMKGDMRRHLSTHSKEKVKFTSDNEGDTVPEKEPPKRKTRSSAAVTAEMKVEKQEDASENGKDDSSDGNKAQNANMIQSSTNENILPDETRLPANFPLDANGAMYVWPVFIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -