Basic Information

Insect: Agapetus fuscipes
Gene Symbol: -
Assembly: GCA_951799405.1
Location: OX637354.1:14134247-14167288[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 7.8 5.3e+02 1.9 0.7 2 23 514 535 513 535 0.93

2 19 0.033 2.2 9.4 0.0 1 23 543 566 543 566 0.90

3 19 0.14 9.6 7.4 1.0 1 21 770 790 770 791 0.94

4 19 0.087 5.9 8.1 0.8 2 23 801 822 801 822 0.94

5 19 0.004 0.27 12.2 1.0 1 23 860 884 860 884 0.96

6 19 0.0017 0.12 13.4 2.5 1 23 889 911 889 911 0.97

7 19 0.031 2.1 9.5 2.3 1 23 917 939 917 939 0.97

8 19 2.9 1.9e+02 3.3 0.0 3 19 951 967 949 969 0.87

9 19 0.00016 0.011 16.7 2.3 1 23 1046 1068 1046 1068 0.98

10 19 5.4 3.7e+02 2.4 3.2 1 23 1075 1097 1075 1097 0.91

11 19 0.0092 0.63 11.1 4.3 1 23 1129 1152 1129 1152 0.94

12 19 0.0032 0.22 12.6 5.3 1 23 1158 1181 1158 1181 0.97

13 19 0.0015 0.1 13.6 0.4 1 23 1196 1219 1196 1219 0.97

14 19 0.00027 0.018 16.0 0.9 1 23 1234 1256 1234 1256 0.98

15 19 0.027 1.9 9.6 0.6 1 23 1261 1284 1261 1284 0.95

16 19 0.2 13 6.9 2.0 1 20 1290 1309 1290 1312 0.89

17 19 0.034 2.3 9.3 0.9 1 22 1318 1339 1318 1339 0.95

18 19 7.7e-05 0.0052 17.7 0.5 1 23 1356 1378 1356 1378 0.98

19 19 0.0091 0.62 11.1 7.2 1 23 1384 1407 1384 1407 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	7.8	5.3e+02	1.9	0.7	2	23	514	535	513	535	0.93
2	19	0.033	2.2	9.4	0.0	1	23	543	566	543	566	0.90
3	19	0.14	9.6	7.4	1.0	1	21	770	790	770	791	0.94
4	19	0.087	5.9	8.1	0.8	2	23	801	822	801	822	0.94
5	19	0.004	0.27	12.2	1.0	1	23	860	884	860	884	0.96
6	19	0.0017	0.12	13.4	2.5	1	23	889	911	889	911	0.97
7	19	0.031	2.1	9.5	2.3	1	23	917	939	917	939	0.97
8	19	2.9	1.9e+02	3.3	0.0	3	19	951	967	949	969	0.87
9	19	0.00016	0.011	16.7	2.3	1	23	1046	1068	1046	1068	0.98
10	19	5.4	3.7e+02	2.4	3.2	1	23	1075	1097	1075	1097	0.91
11	19	0.0092	0.63	11.1	4.3	1	23	1129	1152	1129	1152	0.94
12	19	0.0032	0.22	12.6	5.3	1	23	1158	1181	1158	1181	0.97
13	19	0.0015	0.1	13.6	0.4	1	23	1196	1219	1196	1219	0.97
14	19	0.00027	0.018	16.0	0.9	1	23	1234	1256	1234	1256	0.98
15	19	0.027	1.9	9.6	0.6	1	23	1261	1284	1261	1284	0.95
16	19	0.2	13	6.9	2.0	1	20	1290	1309	1290	1312	0.89
17	19	0.034	2.3	9.3	0.9	1	22	1318	1339	1318	1339	0.95
18	19	7.7e-05	0.0052	17.7	0.5	1	23	1356	1378	1356	1378	0.98
19	19	0.0091	0.62	11.1	7.2	1	23	1384	1407	1384	1407	0.96

Sequence Information

Coding Sequence: ATGTCTCTGACGCTGTGCATGCAGGATACGTCAGGCGGCAACACTGACATTGTCATAGAGAAACATCACACATTTCAAGAATTCCTAGACAACTCCAGGCAGTCTCTCGGATATGACATTGACTTGTCTATGATCACAAGGAACAAAGATGTCAAACTCACGGACAATGTGTATGACTTCTTCAATGAGCTCCAGGCTGAAGACGGGGAGGCTGACAAGGTTCCCGAGGAAGAAACCCAGGGAATTCAAGAAACTCAGGAAACTGAAGAAACTCAGGAAACCCTAGAAACTCAAGAAACAGAAGGAACTCAGGGAAACCTAGAAACTCAAGAAACAGAAGGAACTCAGGGAAACTTAGAAACTCAAGAAACTGAAGGGACTCAGGGAACCCTAGAAACTCAAGGAACTCAGGAAAGCCAGGAAGAGCCAAGTCAGGATGAAGGCGAAGGAGAGGCAGAGTTCTTGGAGGAAGACTATGATGTGGAGTATTTAGAGGAACCAAGCGAAGATGAAGAGAATATGGAGGTTGAAATGCTGGAGTCGGATTTCGAGGAAGAAATGATTATGCAGAAGAAACCAACAAGGACTTATTCTAGAAATGTCGAGAAAGTGGCTGTAAGTAAACCCGTCGGGGACGACAAGATATCCTTGGAAGAAGCTTTAGCTCTTGTGGAAAACGGGGCGAATGATGACGGAGACATCTTGGCTTCCGAGTTGGGAGAGCTGACTAAAGAATTAGAGAATGACGAAGCTCTGACCAACAGCCAAGTCACGGAGAAAAAGGAATCTGATGGGAATGCGCTGTACACCAATCAGGAACTTTTAGACGTGCTGGGAGGGGATGAAGACGTAGAGAATGTGTTGTCGGTGAACAAGATTTATAAACCAGAGCGTCCAGGGCCCAAGTGCTCCAAAAGAAGAAAGGAGGAAGACTCCTCGGACGAGGCGATCATGAAATCTTTGTTTTACGGAGGACAGAAGAACGCCACGAAGAAGCAGCGTATAAATGAAGACATAGAGAGCTACATCGAAGAAGTCTCGTATTATAGTCCCGAGGATATTGCGGAAATGCTGAAGACTGTGCGGCAACCGGAAGTGGCGCTGGAGAAGTTGGACGAGGAGGAGGTGGAGAAATGGAAGGGTGATGTGTGGAAGGGCTCGGCCCGACGACTGTTGCCGGCTGTGTACGAGGACGTTGATAATGAAGGGATCTATGACTATGAAGAGTCGGAGCTGGAGTTCCGGGACCTCATCGGGGATAAGCTGGGACTGTTCCGGAAGAAGTCGGAGCAGAGGACCAGCGTGGCCACGGCTGTGGAGGGGATCAATAGACTGTTCACTAAGAAAGAAGCCAAAGACAGGAAAAAGACCAGTGTATACTTCACCTCTCAATACATAAAGCAAGAGctggatgatgatgacgatgatggtaGATACGTCAGGAAAATCAAGCGAGAGCCCCTGAGCGCTGACGAAGACTACGTGCCAGGAGCTGACGAGGACTGGACCCGCAGACGCAAGAAGTCCAAACCTCTGctgacatgccgcatgtgcagcCTCTCATGTGCCAGGCTACAGGACGCAGTGAGACATGCCCTACAACACAAGCTGCCGGGCAGGGCTGTGTATCCTTGTATCCTGTGTCCACTGGGTTTCACGACCTCCACGGAGTTGGAGGAGCACATGCTGGACGAGCACAAGCACAAGCGGGGCCGTGGCCGCGGCTCTGGAGCCGTGGGCAGACCCAGGATCAAGCGGGAGCCCGTTCCTCCTCCGCCCCCGAGGGACCCCAACGCCGAGCTGTTTGGCCCGGCCTGCATCAAGAAGGAGCCCCAGGACTCAGAGCCTGAGATGGAGCAGGACATCATCATGCTCGAGGAGTGGCTGGAGGAAGACAGCTCCAGCAAGGAGGTGGGCCTGGAGGCGCTGCTGATGGCGCATCTACCGCAACTGGAAAAGTGCGCCATCAAACTGGAAGCCGAGGACTTTCTGCTGGCCGAGCTGGAGGAGAGAGAGCGCACCAACCGCATGGCCAGATACAGCAAGCCCAAGACCTCCCACGTGCACTTCCAGCTGAAGCCCAACTCCATCAAGATCAACCCCAACTCCCTCATCAGGCGGCCCCTGCTGCAGCAGGCGGACGAGGTGAAGATTGTGCGTCTGCCCGGAACGCCCCCCAAGCAGGAGGTCATCAAGGTGGAGCCTGTGGAGAAGCAGGAGGAAGAGGATCCTGATGATCCGGAGGACGACTCTTGCGGGGAGGTGGAGTGGCTGATGGATGAAGAGGAACTCCTCAAGGATTTGGGGTTTTCTTGTGAAACTTGCGGGGGAGAGTATGAGGACGAGGACCAGCTGCAGCAGCACCACTGCCAGGAGAGGGCCCCGGTGCTGGAAAGTGCCCGCTGCGCTCTGTGTGGACAGATCTTCCCCTCCAACAAGCGCCTGCAGTATCACAGATCCTTCCACCAGGCGGAGCTGCTGTGGAGAGGCCTGTCCTGCAGAGACTGTCCCGAGCTGTCGGCCTTTGTGACGGAGAAGGAGCTGTTTGATCACCTCAATGAGAAGCACAACAACTCCTTTGTGTGCGGGGAGCAGGGCTGCAACAAGAAGTTCCATCTCAGATCTTCACTCCGCGCCCACGGCCGCATCCACGGCAAGCAGCGCCACCGCTGCGAGGTCTGCAACAAGAACTTCTTTGATTTGCAGAACCTCAAGGAGCACAACATCACACATCTCAAGGTGAAGCCCTTCCAGTGCCACATCTGCCTGAAGTACGTGAACCGGCGCTCCCGCCTCCGCATGCACCTGCTGGCTCACGAGGCCCGCCCCACTTCCAACTGTATCCTGGCCTGCAAGGCGTGTGGACAGGCCTTTAGGGACGCCCAGGACGCTGAGATGCACGCTGAAGAGTCTCCAGAGTGCTGTGTGGACATAAAGAAAGAAGAACCAATGGACTCTGCGCCAGAGCAGCCGGAGGAATACGAGGAGAAGGTGGACGACCCTGAAGGAACACACGACCAAGCGGAGAACGGAGTGGGCAGCCAGGAGGAAGAGAAACGAGGGGAGAAGAAGCTGCTGGAGGAGCTCACGCCGCCCACCAGGCAGAGGACCAGCGCCATGACCATCAGCATGGTGTACCGCTGTGAATACTGCGAGAAGGTGTATTGCACCGTGGAATCCCTGAATAACCATCGGCAGATCCACCGCGGCATCAAGGAGCCCTTCATCTGCAACATATGCAACAGTGCCTTCTCCACATATGCCAGATGCACGTCCCACAAGACCACGCACGGCTTCTACAAGCTGAGGCCGGAGACGGGAGGAGACCAGGAGCAGAGCGCGCAGGCTGTCAGCGGGTACGAGGCATTCCCAGTCGTCAAGCACTTCCTGTGCGAGATATGTGACAAGACGTTCCTGCACTGGACGTACCTGCAGGTGCACAGGCGGCACAAGCACGTGGCGGGGCACTTCTTCAACTGCAAGCTCTGCGGGGAGCACTTCCGGGAGAGTTGGATGCTGAATCATCACAGGAGGAAGTACCACCCCGAGGTCATCAGCAGAGCTAAAATCAGCGCCAATACATCGTACAAGTGTGCAGACTGTGAGCAGGGCTTCAACATGAGGAAGGAGCTGGCCAAGCACAGAGACACTGAGCACGGGGATCCATCTCTGCTGCAGGCCAAGAGCAAGCCAGGTCCCTTCAGCTGCCACGAGTGCCAAAAAGTTTATCAAACCAAAGCTGGACTAGATGGCCACATGCGAATCCACAATGGCCGCCTGTACCTGTGTGCCCTGTGCGGAAACGGCTTTGCACATCAAGCTGGCCTGGCAACACATCATAAGCGTGTGCACCTGCGCCAGCAGCGCCACACGTGTGGAGTGTGCGGGCAGAGCTTCTTCTCCTCCGCAGAGCTGGACGGGCACTCGCGCTGCCACACAGGGGAGAAGCCCTTCCCCTGCGACTACTGCCCCATGTTCTTCAGGACCAAGGGCAGGCGCAACGAGCACCGCAGGACCAAGGGCAGGCGCAACGAGCACCGCAGGATTCACACTGGCGAGCGGCCGTACCCGTGCGACGTGTGTGGTCTGGCCTTCAGGAGGTCGCACGCCATGAAGAACCACCGCCTCATCCACACCGGGGAGAGGCAGCACCGGTGCCCGCACTGCTCCAAGCTCTTCCACGTCAGGTCCAACCTCAACACACACATCAAGAACAAGCATCCTGGCAACTTCTTGGTGCTGGAGGTGGCCGGAGGTGCCGAAGTGCGCGCCAAGCTTGAAGAGGAGCTGCAGCAGCTGGCCCTGGAGCAAACGCAGATCCAGGAAATCACCGACGATCCGGATACAGTCACACACAACGTCGAGGAGCCAAACTACTGCATACAGCTGCTGCTGGATGAAGATGGACAGTTCATCGAGCAAGGGGCGCAGGGCCAGGGTGTCACGCTGCACCGGGTGGACGGAAATGTGGTGCAGGAAGGTCACACCCTGCAGCTGGTCGAGGGAGAGGTCTACGAGGGTGGGGATCAAGCCCTGGTGGACCAGCATGGAAACTTGGTGAACGCAGAAGCCACTCTAGTGAATGAGCAAGGAAACCTAGTGGATGCAGATGGAAACTTGATCAGTGCAGAAGCCACTCTAGTGAATGAGCAAGGAAACCTTGTGGATGCAGATGGAAACTTGATCAGTGCAGAAGCTACTTTAGTGAATGAGCAAGGAAACCTTGTGGATGCAGATGGAAACTTGATCAGTGCAGAAGCCACTCTAGTGAATGAGCAAGGAAACCTTGTGGATGCAGATGGAAACTTGATCAGTGCAGAAGCCACTCTAGTGAATGAGCAAGGAAACCTTGTGGATGCAGATGGAAACTTGATCAGTGCAGAAGCCACTCTAGTGAATGAGCAAGGAAACCTTGTGGATGCAGATGGAAACTTGATCAGTGCAGAAGCCACTCTAGTGAATGAGCAAGGAAACCTTGTGGATGCAGATGGAAACTTGATCAGTGAAGAAGCCACTTTAGTGAATGAACAAGGAAACCTTGTGGATGCAGATGGAAATTTAGTTGATGAGCAAGGAAATATAGTGGAGGGGAATAGACAGTTTGTAAATGAGCATGGGCAGTTGGTTAATGAGCACGGAAACTTGGTTGATTCGGATGGAAACTTGATAAATACAGGCGTGAATTCAGTGGATGAGCAGGGAAATTTAGTGGATGAGCACGGAAATTTGGTGAATGAGGAGGGACAACTTGTGGACGCAGATGGAAACTTAGTGAATGCAGGCGTGAATTCAGTAGATGAACAAGGAAATTTGGTAGACGAGCAGGGTAATTTGGTAAATGAAGAAGGGCAGTTAGTGGATGCAGACGGAAACTTGATCAGTACAGTTCAAGCGTTGGTGGATGAGCATGGAAACTTGGTAGATGAACACGGGAATCTGGTGAATGAAGAAGGGCAGCTGGTAGATGCGGATGGAAACTTAATCAGTACAGATCAGAATTTAGTTGATGAGCAGGGAAACCTGGTAGATGAGCAGCGGCAATCAGTAGATGCCGATGGAAATCTAGTGAATGCAAGCGGAAATTTAGTAAATGAAGATGAATGCTTGCTCGAAACTAAAAAGGAAATGCAAGAAACTATGAATTCAGACGAGAACTTGGAagaaagcgataaaacacaAGAAATGCCAGCTGAAAATGATGAGAAGACCGCGGAGGTTGATAACCAAGATGGAAAAGAGTTTACGGAAAAAGTTTCTGATGAATTTGTCGAAGGAAAAGAAACTGGAATGGGAGGGGAGTTCCTGGATGAAGTCAGGGAGCCAGCGGAAACTGTAGTCAGTTTAAAAAATGATATGTTGCCTTTGTAA
Protein Sequence: MSLTLCMQDTSGGNTDIVIEKHHTFQEFLDNSRQSLGYDIDLSMITRNKDVKLTDNVYDFFNELQAEDGEADKVPEEETQGIQETQETEETQETLETQETEGTQGNLETQETEGTQGNLETQETEGTQGTLETQGTQESQEEPSQDEGEGEAEFLEEDYDVEYLEEPSEDEENMEVEMLESDFEEEMIMQKKPTRTYSRNVEKVAVSKPVGDDKISLEEALALVENGANDDGDILASELGELTKELENDEALTNSQVTEKKESDGNALYTNQELLDVLGGDEDVENVLSVNKIYKPERPGPKCSKRRKEEDSSDEAIMKSLFYGGQKNATKKQRINEDIESYIEEVSYYSPEDIAEMLKTVRQPEVALEKLDEEEVEKWKGDVWKGSARRLLPAVYEDVDNEGIYDYEESELEFRDLIGDKLGLFRKKSEQRTSVATAVEGINRLFTKKEAKDRKKTSVYFTSQYIKQELDDDDDDGRYVRKIKREPLSADEDYVPGADEDWTRRRKKSKPLLTCRMCSLSCARLQDAVRHALQHKLPGRAVYPCILCPLGFTTSTELEEHMLDEHKHKRGRGRGSGAVGRPRIKREPVPPPPPRDPNAELFGPACIKKEPQDSEPEMEQDIIMLEEWLEEDSSSKEVGLEALLMAHLPQLEKCAIKLEAEDFLLAELEERERTNRMARYSKPKTSHVHFQLKPNSIKINPNSLIRRPLLQQADEVKIVRLPGTPPKQEVIKVEPVEKQEEEDPDDPEDDSCGEVEWLMDEEELLKDLGFSCETCGGEYEDEDQLQQHHCQERAPVLESARCALCGQIFPSNKRLQYHRSFHQAELLWRGLSCRDCPELSAFVTEKELFDHLNEKHNNSFVCGEQGCNKKFHLRSSLRAHGRIHGKQRHRCEVCNKNFFDLQNLKEHNITHLKVKPFQCHICLKYVNRRSRLRMHLLAHEARPTSNCILACKACGQAFRDAQDAEMHAEESPECCVDIKKEEPMDSAPEQPEEYEEKVDDPEGTHDQAENGVGSQEEEKRGEKKLLEELTPPTRQRTSAMTISMVYRCEYCEKVYCTVESLNNHRQIHRGIKEPFICNICNSAFSTYARCTSHKTTHGFYKLRPETGGDQEQSAQAVSGYEAFPVVKHFLCEICDKTFLHWTYLQVHRRHKHVAGHFFNCKLCGEHFRESWMLNHHRRKYHPEVISRAKISANTSYKCADCEQGFNMRKELAKHRDTEHGDPSLLQAKSKPGPFSCHECQKVYQTKAGLDGHMRIHNGRLYLCALCGNGFAHQAGLATHHKRVHLRQQRHTCGVCGQSFFSSAELDGHSRCHTGEKPFPCDYCPMFFRTKGRRNEHRRTKGRRNEHRRIHTGERPYPCDVCGLAFRRSHAMKNHRLIHTGERQHRCPHCSKLFHVRSNLNTHIKNKHPGNFLVLEVAGGAEVRAKLEEELQQLALEQTQIQEITDDPDTVTHNVEEPNYCIQLLLDEDGQFIEQGAQGQGVTLHRVDGNVVQEGHTLQLVEGEVYEGGDQALVDQHGNLVNAEATLVNEQGNLVDADGNLISAEATLVNEQGNLVDADGNLISAEATLVNEQGNLVDADGNLISAEATLVNEQGNLVDADGNLISAEATLVNEQGNLVDADGNLISAEATLVNEQGNLVDADGNLISAEATLVNEQGNLVDADGNLISEEATLVNEQGNLVDADGNLVDEQGNIVEGNRQFVNEHGQLVNEHGNLVDSDGNLINTGVNSVDEQGNLVDEHGNLVNEEGQLVDADGNLVNAGVNSVDEQGNLVDEQGNLVNEEGQLVDADGNLISTVQALVDEHGNLVDEHGNLVNEEGQLVDADGNLISTDQNLVDEQGNLVDEQRQSVDADGNLVNASGNLVNEDECLLETKKEMQETMNSDENLEESDKTQEMPAENDEKTAEVDNQDGKEFTEKVSDEFVEGKETGMGGEFLDEVREPAETVVSLKNDMLPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -