Basic Information

Insect: Agapetus fuscipes
Gene Symbol: -
Assembly: GCA_951799405.1
Location: OX637340.1:15402719-15404224[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 7.4e-05 0.0051 17.7 3.2 2 23 184 205 183 205 0.97

2 11 0.0025 0.17 12.9 1.9 1 23 211 234 211 234 0.98

3 11 8.7e-05 0.0059 17.5 1.1 1 23 240 262 240 262 0.98

4 11 0.038 2.6 9.2 6.9 1 21 268 288 268 290 0.94

5 11 2.1e-05 0.0014 19.4 1.7 1 23 296 318 296 318 0.97

6 11 6.9e-06 0.00047 21.0 0.7 1 23 324 346 324 346 0.98

7 11 0.00013 0.0091 16.9 4.0 1 23 352 374 352 375 0.95

8 11 0.095 6.5 7.9 3.3 3 23 382 399 381 399 0.87

9 11 6.6e-05 0.0045 17.9 1.4 1 23 405 428 405 428 0.96

10 11 0.089 6.1 8.0 0.7 1 23 434 459 434 459 0.95

11 11 0.00076 0.051 14.5 2.8 1 23 465 488 465 488 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	7.4e-05	0.0051	17.7	3.2	2	23	184	205	183	205	0.97
2	11	0.0025	0.17	12.9	1.9	1	23	211	234	211	234	0.98
3	11	8.7e-05	0.0059	17.5	1.1	1	23	240	262	240	262	0.98
4	11	0.038	2.6	9.2	6.9	1	21	268	288	268	290	0.94
5	11	2.1e-05	0.0014	19.4	1.7	1	23	296	318	296	318	0.97
6	11	6.9e-06	0.00047	21.0	0.7	1	23	324	346	324	346	0.98
7	11	0.00013	0.0091	16.9	4.0	1	23	352	374	352	375	0.95
8	11	0.095	6.5	7.9	3.3	3	23	382	399	381	399	0.87
9	11	6.6e-05	0.0045	17.9	1.4	1	23	405	428	405	428	0.96
10	11	0.089	6.1	8.0	0.7	1	23	434	459	434	459	0.95
11	11	0.00076	0.051	14.5	2.8	1	23	465	488	465	488	0.95

Sequence Information

Coding Sequence: atggattgtcCTGTCGAATATAAACTTTTAGATCTAGGACTGCTATGCAGAATCTGTTTGGGCTCCATTGAAGATGCTACAAAAATTTCCCTATTCAGTTCAAGCGATATTGACTTGTTGACGTATAAAGCGCTTCTAGTTAAGAGTGTCCCTTATGAAGTATCCTGGAGCGACGGTCTCCCTGCTCATATGTGTTCCTCTTGCGCCACAGAATTGAATATAACCTACAAATTTATTACAAAGTTCAAAGAATCCGATGAACGTTTAAATGAGATTGTAAGAAATATGGGCCTTCTCAATTCTAACCCAACGCAATGGGAAGACAGTATAATTATTGATGATAAATTGGAACTGATATATCCTAAGATAGAACCTAAATCTGAAACTATTCTAGAAAGTGATGGAAACGATGATGAAGACGAGTGCCAAGTTAAACTCGAAGACGATTCTGACAGCGAACTCTTAATATTCGCAAAACGAAGAACTAGCTTTCAAAAATCCGAAAGGAAAAGAAGAAAACGAGATAGTAACGAGCGGAAAGCAAATTTACAGTGCGATTTCTGTAACAAAGTCTTCAACCGTCGTTGTTTAGTTGTAACACACATGCGCACTCACACTGACGAGAGACCATTCCAATGCACTAAATGCCTCAAGAGATTCATCGCTAAAAGATCCCTAGACCTGCACATCAAAAAGAATCACTCGGAAAAACGTGAGCACACTTGCGAGATATGCGGAAAGCAATTCTTCGATAGAAACTCTGTGGTGCAACACATTAAAATTCACAATGAAATAGAAGTGTTCCCTTGTAAACACTGCCCGAAGGCATTCAAATGCAAAGCAAATCTACGCATGCACGTTAAATGCCACGGAACAGACCGGCCCTTCTGCTGCAACATCTGCGGCAAAACCTTTGTAGTTAAACAATACTTAGATCAGCACTTGAACGTTCATTCGGATCAAAAGAAATTCTCATGCGAAATGTGCGGAAAGAAATACAAAACCTGGAACGGTCTGAAACTGCACCGCCTTGTCCACAGGAATGAAAAGCCTTTCAGTTGTCTATTATGCAACATGAGCTTCTTTTCAAAAACTAATTTAAATCAACACACGAGGATTCATCACTCGGAAAAGTCGGGGCATTGCGACATTTGCAAGAAGAGTTTCTCAAATCTTAAAGAGCATTCCAGGCTGCACACTCGAGAAGCGACTTACCAGTGTGACCTGTGCAAGCAGAAGTTTATAAGGAAGAATGGCTTAACGCTTCACATGCTGCAGAAACACGATGGCGCTACCAAGTATAAATGCTTACAAGAAAACTGTCCTCTCAAGTTTCCCTCCAAAACTATGCTGGATTATCACGTGCTGAAATTCCATACAAAAGAAACTCCACACGTTTGCACTGACTGTAATATGGGATTTTACAGGATCTGTGATTTAACGAGGCACATTAAAGCTCAGCACAACAAGGGAGATGCAACAGAGGCATTTGAAGAGAAAGTGTGA
Protein Sequence: MDCPVEYKLLDLGLLCRICLGSIEDATKISLFSSSDIDLLTYKALLVKSVPYEVSWSDGLPAHMCSSCATELNITYKFITKFKESDERLNEIVRNMGLLNSNPTQWEDSIIIDDKLELIYPKIEPKSETILESDGNDDEDECQVKLEDDSDSELLIFAKRRTSFQKSERKRRKRDSNERKANLQCDFCNKVFNRRCLVVTHMRTHTDERPFQCTKCLKRFIAKRSLDLHIKKNHSEKREHTCEICGKQFFDRNSVVQHIKIHNEIEVFPCKHCPKAFKCKANLRMHVKCHGTDRPFCCNICGKTFVVKQYLDQHLNVHSDQKKFSCEMCGKKYKTWNGLKLHRLVHRNEKPFSCLLCNMSFFSKTNLNQHTRIHHSEKSGHCDICKKSFSNLKEHSRLHTREATYQCDLCKQKFIRKNGLTLHMLQKHDGATKYKCLQENCPLKFPSKTMLDYHVLKFHTKETPHVCTDCNMGFYRICDLTRHIKAQHNKGDATEAFEEKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -