Basic Information

Insect: Agapetus fuscipes
Gene Symbol: -
Assembly: GCA_951799405.1
Location: OX637359.1:3129306-3133019[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 7.7e-06 0.00052 20.8 0.4 1 23 139 162 139 162 0.98

2 19 0.001 0.071 14.1 1.1 2 23 164 186 164 186 0.95

3 19 0.0047 0.32 12.0 0.6 2 23 403 424 401 425 0.91

4 19 0.0051 0.35 11.9 0.2 1 23 546 569 546 569 0.93

5 19 3.1 2.1e+02 3.2 0.2 3 23 603 623 601 623 0.93

6 19 6.9 4.7e+02 2.1 4.3 1 23 629 651 629 651 0.97

7 19 0.00035 0.024 15.6 0.8 3 23 659 680 658 680 0.91

8 19 0.00027 0.018 15.9 1.8 3 23 716 737 715 737 0.95

9 19 0.11 7.7 7.7 0.2 1 21 742 762 742 766 0.90

10 19 0.022 1.5 9.9 0.8 1 23 775 798 775 798 0.96

11 19 0.0012 0.082 13.9 0.4 2 23 805 826 805 826 0.97

12 19 0.00052 0.036 15.0 2.5 1 23 833 856 833 856 0.96

13 19 5.1e-05 0.0035 18.2 0.6 1 23 862 884 862 884 0.98

14 19 0.011 0.74 10.9 1.1 1 23 890 913 890 913 0.88

15 19 4.8e-05 0.0033 18.3 0.1 1 23 926 949 926 949 0.98

16 19 0.0025 0.17 12.9 0.6 2 23 956 977 955 977 0.97

17 19 0.018 1.2 10.2 0.2 1 23 982 1005 982 1005 0.97

18 19 0.021 1.4 10.0 1.0 1 23 1011 1033 1011 1033 0.98

19 19 0.044 3 9.0 6.1 1 23 1039 1062 1039 1062 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	7.7e-06	0.00052	20.8	0.4	1	23	139	162	139	162	0.98
2	19	0.001	0.071	14.1	1.1	2	23	164	186	164	186	0.95
3	19	0.0047	0.32	12.0	0.6	2	23	403	424	401	425	0.91
4	19	0.0051	0.35	11.9	0.2	1	23	546	569	546	569	0.93
5	19	3.1	2.1e+02	3.2	0.2	3	23	603	623	601	623	0.93
6	19	6.9	4.7e+02	2.1	4.3	1	23	629	651	629	651	0.97
7	19	0.00035	0.024	15.6	0.8	3	23	659	680	658	680	0.91
8	19	0.00027	0.018	15.9	1.8	3	23	716	737	715	737	0.95
9	19	0.11	7.7	7.7	0.2	1	21	742	762	742	766	0.90
10	19	0.022	1.5	9.9	0.8	1	23	775	798	775	798	0.96
11	19	0.0012	0.082	13.9	0.4	2	23	805	826	805	826	0.97
12	19	0.00052	0.036	15.0	2.5	1	23	833	856	833	856	0.96
13	19	5.1e-05	0.0035	18.2	0.6	1	23	862	884	862	884	0.98
14	19	0.011	0.74	10.9	1.1	1	23	890	913	890	913	0.88
15	19	4.8e-05	0.0033	18.3	0.1	1	23	926	949	926	949	0.98
16	19	0.0025	0.17	12.9	0.6	2	23	956	977	955	977	0.97
17	19	0.018	1.2	10.2	0.2	1	23	982	1005	982	1005	0.97
18	19	0.021	1.4	10.0	1.0	1	23	1011	1033	1011	1033	0.98
19	19	0.044	3	9.0	6.1	1	23	1039	1062	1039	1062	0.95

Sequence Information

Coding Sequence: ATGGAGTCAGAACCTGAGGGGGACAGAGAGAAGGGAAGGGGCGCAGCGCCACAGCCAGGAGCTTGTATTGTCATTAAACGGGGACCAGAAGACAAAGACAAGGAAACCCAAACAGCCGTAGCTTCCCAAGATGAGAGCGTCGACTTGCTGTCATCTGATGACGAGCAACAAAATGTAGCTGCACCAGAGCAAGTGATGCGTTCCTCTGTGTCCGAGGTAAACAATACACCTAAGGATCCTATTGCCAACTCAGGAAGAGTTCCAACTGGAGTTCAGAAGTGTAGAGGTTGCTTTGAAGCACTTCCTGATCAAATTAAAATGATGTACCACATAGCAAGATGTGAAAAAGTACTGAAAGGAGATGTTTCCACCAGCAGTTCACAAAAGCTGTGTGCTTTATCTAAGGTTGTGGTATATCCATGCTCCACGTGCCCCAAGATATTTATCACAGAGGAAACCCTGCAGAAGCACCAGCAGACGCAGCATGCAAGGTGCCAGTACTGCCAACAAATATTCAAGACTAGCACTGAGCTGGCCTCCCATACAAAAGAAATGCACAAGCACACTTGCAAAAAATGTGGAGATGTCTACCATGCCAAAGAACCTGCAAAGAGGCATTGTGGTATTCCACAAGGTGAATTAGAAGCAGAAGCTGCTAAACCAGATAAAAATGTtgaggaaaaagaagaaatcgTCAAGCCTACACTACAATACACCACATCTGGACTTCTTGTGGCTTCTGAAGCACCCAGTGACAATGCTAACAAAACAACAAGTACAAAAGTTGTTTCTAGTAACGTATCACAACTTCTAGAATCAGGTACTTTTGATCCATTTGCTTGCACGCAGAGAATGGATGTGCTGGTAAAAGCCTGCAGGGTCATGAAGAAATGTGTGTTTTGTTCTATACCATATGAAAACCCAAAAAATTGTAGAAAGCATGTtttgaattgttgtaaattggcAGCTTACATGAAGAAGCGCTATCAAGTTCCGTTGAAAACATGCACCCTGTCTCCTTCAGCACCAGACAAACAAGAACCAGCACCTGAGATGTTAGCTGCTCCACAATCCCAAGCTGTGGCCTCCCATCAGCTGGCTCCTAAGTGCTTACCTCAATCGACCAAATCTAACAACCCCGAGATGGATAAAGCTCTTAACTTCAACTTTGTTGATATTCCCTCCATTCCGCTAGAACCCAAGTGTGAGTGTCTCATATGTGGAGCAAGCACAGCCTCTGCAGAGAGCCTCCTGACGCACATGGAGCTTCATCACAAGAATGTGGACCCTCTGGCAGATGTCATCAAGGAAGAGGACTGCTCCACTCAGCCAGGAGATCAGGAAGAAGAGAATCAAAGTCTGGTACAATCAGAAAAACATGCTGAAATAAAATCAAAGGAACAGAAGGATGTTGTGAAACCAACAGAAAAGGACATCTGCTTGCAATCTAGCAGCATCACCTCTGAGATTTCCAAATCAGCAGACATGAAGGTCCGCATTCCAAGTAATCCTGTCATTGGAACCCGTTCCAGAAATTTTAGATGTTTGCTTTGCTTCTCAAAAAACTACACCTTGTACAAAAAACATCTCCTTCACATGCATTCTGCCAGAGCTCTGTTTATGAAACCTAAGTCATATGTGTGTGCTTACTGCAAAAAGCCATTTGGAAGTGTTGACGAAATGAAAAATCATTTGACTGCCAAACATTCCAATTATATCACATGCAAATATTGCACAGTGCCAATGAGTGGGACAGTTCAGCAAAGGACTGCACACATGAAGAAAGTTCATCCCACCATCCTGGACTGCTCTCTGTGTGACCTCTTATTCCAAACTAAACAGGAGCAAGCGCAGCATCTCACCTGGCACTCGAGGGGAGAGGAGCATAAGTGTGAGCTCTGCAGCAATACAATTATTGGTCACAGAAAGTACAAGTGGCATATGCAACGCCACAATGTAGAAAATGCCTCCCTGTGTCCTATATGCGGACAAACATTCAGGACCAGTCATGCTCTAATGTTGCACAACTACAGGATGCACCAGGGCCCGAGAGATACGCTGTGTGTGGAGTGTGGCGTCACTGTGCCCAAGGCAATGTATGGCTGGCATCGCCGCCACATGCACGGGGCCAAGGTGCTGGGCATGTGTGACATGTGTCCTCAAGTCTACAGGAAGAGGAGCAACCTGGCTCGCCACCAGCAGGAGTGCCACTCTGGAGACCTGCACCCCTGCGAGAGCTGCAACGTGACCTTCCCCACAGGCGCCGACCTGGCTCAGCATCGACAGGAGGTGTTCCACCCACCACCCACGCCAACAAAGCTGTATCCCTGCCAAGACTGTGGACAACAAAAGAACTCAGCCAGGAACTTGCGTGTCCACCGACGTTTTCAACATGAAAAGCATCTCTTTGAGTCTTGTACGGTTTGCTCCATGAAGTTCCCCTTTGCCAGGACTTTAGAAAAACACATGTTGATCCACCTAGGTGATAAGGCTGAACACGTCTGCACCTCCTGCAAGAAGCCTTTCGTGTCTGCCGTGTCTCTGCGTCACCACTTGCAGAAGGTGCATCAAGTGGAGCGCCCCTTCACATGCAGTTTGTGCCCATATAAGTTTTACCGCCAAGAATCCCTTATTATTCACGAGCGCATACACACCAACGAGAAGCCTTATGTCTGCAAGGTGTGTCCCAAAACTTTCCGAGATATTGATGCCTGTAAGCAACATGAAGCCAGGATGCACAAAATGCATTCTCCTTTACCTGGCACTGCTTACAAGTATATCTGCGAAGAATGTGGAAAAGGGTTGACCTCTGCAAGTCGCTTACTCGTTCACCAACGCACTCAACATGAAAAGCATCTGTTTGTGTCTTGTCCAATGTGTTCCATCAAGTTCCCCTACGTTAAGATGTTGGAACATCACATGTTGAAACACCAAGTGGCTAAACACATGTGTTCTGTCTGCAAGATGCCATTTGTTTCTGAAGTAACTTGGGGGGCACACATGCAGACGGAGCATCAGGTAGAGCGCCCCTTCTCATGTCAATACTGTCCAGCTAAGTTCAAGTTAAAGAATGGTGTCTTCCTCCATGAGCGCACACACACAGGTGAGAAGCCTCATGTCTGTAAGGTGTGCTCCAAAGCTTTTCGACAACGTTATTCCTGTAAGCGACATGAAATGAGGATGCATAAAATGCATTCTGCTGCGCTTGGCTCTGCTTCTTCTCCAGAGCACATGCTCATAGCGGAGTCTCTGGCTCGACTGGACCAGTCCCGGCAAAAGCAAAAATTTGGTTATATagttggataa
Protein Sequence: MESEPEGDREKGRGAAPQPGACIVIKRGPEDKDKETQTAVASQDESVDLLSSDDEQQNVAAPEQVMRSSVSEVNNTPKDPIANSGRVPTGVQKCRGCFEALPDQIKMMYHIARCEKVLKGDVSTSSSQKLCALSKVVVYPCSTCPKIFITEETLQKHQQTQHARCQYCQQIFKTSTELASHTKEMHKHTCKKCGDVYHAKEPAKRHCGIPQGELEAEAAKPDKNVEEKEEIVKPTLQYTTSGLLVASEAPSDNANKTTSTKVVSSNVSQLLESGTFDPFACTQRMDVLVKACRVMKKCVFCSIPYENPKNCRKHVLNCCKLAAYMKKRYQVPLKTCTLSPSAPDKQEPAPEMLAAPQSQAVASHQLAPKCLPQSTKSNNPEMDKALNFNFVDIPSIPLEPKCECLICGASTASAESLLTHMELHHKNVDPLADVIKEEDCSTQPGDQEEENQSLVQSEKHAEIKSKEQKDVVKPTEKDICLQSSSITSEISKSADMKVRIPSNPVIGTRSRNFRCLLCFSKNYTLYKKHLLHMHSARALFMKPKSYVCAYCKKPFGSVDEMKNHLTAKHSNYITCKYCTVPMSGTVQQRTAHMKKVHPTILDCSLCDLLFQTKQEQAQHLTWHSRGEEHKCELCSNTIIGHRKYKWHMQRHNVENASLCPICGQTFRTSHALMLHNYRMHQGPRDTLCVECGVTVPKAMYGWHRRHMHGAKVLGMCDMCPQVYRKRSNLARHQQECHSGDLHPCESCNVTFPTGADLAQHRQEVFHPPPTPTKLYPCQDCGQQKNSARNLRVHRRFQHEKHLFESCTVCSMKFPFARTLEKHMLIHLGDKAEHVCTSCKKPFVSAVSLRHHLQKVHQVERPFTCSLCPYKFYRQESLIIHERIHTNEKPYVCKVCPKTFRDIDACKQHEARMHKMHSPLPGTAYKYICEECGKGLTSASRLLVHQRTQHEKHLFVSCPMCSIKFPYVKMLEHHMLKHQVAKHMCSVCKMPFVSEVTWGAHMQTEHQVERPFSCQYCPAKFKLKNGVFLHERTHTGEKPHVCKVCSKAFRQRYSCKRHEMRMHKMHSAALGSASSPEHMLIAESLARLDQSRQKQKFGYIVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -