Basic Information

Insect: Agapetus fuscipes
Gene Symbol: -
Assembly: GCA_951799405.1
Location: OX637350.1:12998039-13002779[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.034 2.3 9.4 0.9 3 23 81 102 80 102 0.92

2 24 2 1.4e+02 3.8 3.0 2 21 456 475 455 476 0.93

3 24 0.036 2.5 9.2 0.4 1 21 484 504 484 505 0.96

4 24 6.9 4.7e+02 2.1 0.3 1 23 558 581 558 581 0.87

5 24 0.45 31 5.8 3.4 2 21 591 610 590 611 0.94

6 24 0.48 33 5.7 0.0 3 19 620 636 618 637 0.94

7 24 0.026 1.8 9.7 1.8 2 23 662 684 661 684 0.94

8 24 0.38 26 6.0 2.4 1 23 690 713 690 713 0.92

9 24 0.027 1.8 9.6 0.0 1 23 737 760 737 760 0.97

10 24 0.0044 0.3 12.1 0.8 1 23 765 787 765 787 0.97

11 24 0.018 1.2 10.2 0.7 1 23 793 816 793 816 0.97

12 24 0.00027 0.018 15.9 0.4 1 23 830 852 830 852 0.97

13 24 0.00017 0.011 16.6 2.4 1 23 900 923 900 923 0.97

14 24 8.6e-05 0.0058 17.5 1.0 1 23 993 1016 993 1016 0.98

15 24 0.0056 0.38 11.8 1.2 2 23 1038 1060 1037 1060 0.95

16 24 0.015 0.99 10.5 1.4 1 23 1065 1088 1065 1088 0.97

17 24 0.22 15 6.8 0.5 1 19 1123 1141 1123 1143 0.81

18 24 0.0011 0.073 14.0 0.3 3 23 1153 1173 1151 1173 0.94

19 24 0.00011 0.0073 17.2 0.2 2 23 1277 1299 1277 1299 0.93

20 24 1.5e-07 1e-05 26.2 1.8 3 23 1306 1326 1305 1326 0.98

21 24 0.024 1.7 9.8 5.4 1 23 1366 1388 1366 1389 0.93

22 24 9.1 6.2e+02 1.7 1.1 2 19 1419 1436 1418 1438 0.77

23 24 0.015 1 10.5 0.2 2 22 1440 1460 1439 1460 0.90

24 24 0.041 2.8 9.1 0.8 1 23 1472 1495 1472 1495 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.034	2.3	9.4	0.9	3	23	81	102	80	102	0.92
2	24	2	1.4e+02	3.8	3.0	2	21	456	475	455	476	0.93
3	24	0.036	2.5	9.2	0.4	1	21	484	504	484	505	0.96
4	24	6.9	4.7e+02	2.1	0.3	1	23	558	581	558	581	0.87
5	24	0.45	31	5.8	3.4	2	21	591	610	590	611	0.94
6	24	0.48	33	5.7	0.0	3	19	620	636	618	637	0.94
7	24	0.026	1.8	9.7	1.8	2	23	662	684	661	684	0.94
8	24	0.38	26	6.0	2.4	1	23	690	713	690	713	0.92
9	24	0.027	1.8	9.6	0.0	1	23	737	760	737	760	0.97
10	24	0.0044	0.3	12.1	0.8	1	23	765	787	765	787	0.97
11	24	0.018	1.2	10.2	0.7	1	23	793	816	793	816	0.97
12	24	0.00027	0.018	15.9	0.4	1	23	830	852	830	852	0.97
13	24	0.00017	0.011	16.6	2.4	1	23	900	923	900	923	0.97
14	24	8.6e-05	0.0058	17.5	1.0	1	23	993	1016	993	1016	0.98
15	24	0.0056	0.38	11.8	1.2	2	23	1038	1060	1037	1060	0.95
16	24	0.015	0.99	10.5	1.4	1	23	1065	1088	1065	1088	0.97
17	24	0.22	15	6.8	0.5	1	19	1123	1141	1123	1143	0.81
18	24	0.0011	0.073	14.0	0.3	3	23	1153	1173	1151	1173	0.94
19	24	0.00011	0.0073	17.2	0.2	2	23	1277	1299	1277	1299	0.93
20	24	1.5e-07	1e-05	26.2	1.8	3	23	1306	1326	1305	1326	0.98
21	24	0.024	1.7	9.8	5.4	1	23	1366	1388	1366	1389	0.93
22	24	9.1	6.2e+02	1.7	1.1	2	19	1419	1436	1418	1438	0.77
23	24	0.015	1	10.5	0.2	2	22	1440	1460	1439	1460	0.90
24	24	0.041	2.8	9.1	0.8	1	23	1472	1495	1472	1495	0.92

Sequence Information

Coding Sequence: ATGGTCCATGACAATGGTAGTCAAGATGAGCTGGAGGATGAAGAACTGACTGTAGAGGAAGCTTTGGCCatagcagcagcagcagcagccgagGCTCCCCGACGCCCTCCTCAACCAATCCTCCACCGAGTCAACCACGGCCGAGCCCTCATGCAGAGACCCATTCTATCTCACAAAGTCATGGTCAACAAGGGAACGTTCAACAGACCAGGGGCCGTGGCTCAGCTGGCCTCCAAGGACTGCCTGGTGTGTGGGCGCGCGTACAGGTACTCACACAATGCCAGGAGGCACGAGCTCAACTCCCACAACTACGACAGGTACACCAACAAGAACAACCCAGACAAGAGGAGTGATGTCAACAAGCTCCGCCCTAATCCCTACAATGCCAAATCCCGCTTGCTGGTCAACCCTGCTCATCACAAGCTCAAGTATGGACAAAAGATGCACGGGAAGAATGTCATGATTAGGATTCAGCCACATCCTGTTAGGATAAGGTCACTGAGTGAAATGCAGAGGAAACCACACGAGCCGCAGATTCTGAAATCTCTCCTCACTTCTCGTCCTGAGATTGTGGTCGCTGAACCAGAATGCATTGTGCGATCTGGCTCGGAAAGTCCTGAGAACCTCGTGGCAGAACCTGAGATCACCTCTTTTCAAGTTGAGGACATTGTCACTGAACCTGACACTTACAACAATTATGAGGGCTGTGACGATGAAGACATGGATGATGAAGAAGGTGATAAAGAAGGCGAGGAAATGGTTATGCCAGAGTGTGAAGTAGAACTGTCGGAGGAAGTGGACATCAATAAGATAATAGGAGTTGATACAGTAGAGAAAGATGACCATGACGGGGCTGATCAAGACGGCTCTACAAGTGATCAACTAGCTAATGATGCTGATCCTTCAGCTCCTCAAGTAGAGCAACAAGGAAATTTAGAATCTGAGATAGTGCTGGGCGATGTTGGAAATAATGATGATGGTGACAATGATAAGCCCGAAGATGGTGAAGATGACGAGAATGATGGGGAGATGGAAGGATCAAATGTAGAAGGTAGACTGGAACCTCTTGTTGAAGCTGTTTATCCGGATGAAGCAAATGAAAATGGTATTGAAGATGGCGAAGAAGGAGAATCAGGAGAAGAAGGTGgagatgatgaagatgatctgcCTCTTGTTCCCCACCTGTCAGTCATTGAAATGAATGATGAGCAGCCTTCTGATTTGCTAGAGGAGGACAATATGGAAAATGGAATCCTTAATGAAAGCCTTGACATCCAGGGCATCGGCAACCCAAACACAATCACTCCCCAACAAAAAGAATTCTTTGTCAATCACCGGGATGTGATTGAACAAATAAATACCATGAAGTGTCATTGTTGCCAGAAAAGTTATCCCAGAAGAAAAGCTGTCATTCAGCATCTTCAGAAGAATGGGGTGCAAGTGCCAAAACACACCTGCTACAACTGCGTTCTCACCTTCACTCACATAGGAGCCCTGCTGAGTCACATGCGAGCCAACTGCTGCAACAACAGATGGAGACTGATCTACGAGGAAGGTGGCATCCCCGATGACATGGTGCAGGAAGGGCAGCCTGTTCAAGAGTATATAGCCAAATCGGCCAACAATTCCTTATCCAAGTCCCTGTACAAAGATATTCTCAATGCCAGATCCTATGCATGCAAACTATGTCCGTCCAAGTTCCAACTCAAACAGTTCATAATGAAGCACATCATAGATGTTCACGAGAATGGCGGGCAGAGGATTCCTTTGCACTGCCAGCATTGCCGAATGAGGTTCAAGGAAAACCGATTGTGGAAGAAGCATGTAAGAAATGGAGAGTGTACTGTGAATATTGCTTGTGATCTGTGTCCTGAAAGGTTCGCAAGCTTGCAAGACTTTACAGACCACGCCTGGGCTGTCCATGCGAGCGGCGAGCCTTCTACTGACCAAAACCAAACTCGGGCTGTGGACGGAAGACCCACCGAGTGTCCCATTTGTCATAAAGAAAACTCCTCATACCACAACTTGGTGAAGCATCTTAAAGCGATTCACAATGAAGAGAAACCACACATGTGCCAACACTGTGACAGTAAGTATGAAACTGTGACGGAATTAAATGATCATATCTACCTGCAGCATTCTGACAGAACACCCATTCCTTCTAAGGTAGATCTCAGCATTGTGAAGCATGAACAGACCATGTATAACTATTCCTGCACAGAGTGCGCCGAGGTGTTTGACAGCGTAGATGGATGGACTGAACACCAGATAACAGTACACGAGCACCAGGCTTATGAATGCAATCAGTGTGATAAGAAGTTCCTGCAGGACTCGGAGCTGGAGGAGCACAAGAACAATCACTTGCGGGTCAGATTCTATACCTGCACCTTGTGCTCCAACTCATATGGCTCCCCCCAGAAGCTATCTGAGCACATGCTCAAGACACATCAGGGGGAAACCTTGAATGATATATCAGATAGCAATCCATTCTTTTGTGAAATTTGTTTGCGGCCATTTAAGAGCCCGCAGGCGTATTCCAATCACATGCGCATTCATGCTGTAGTGCCTACAACTAACCGCAGATCTGGCGAGCCTACCAAAATAGTTATGCAAAAGAAAATTGTACAGCGGCCGATGCAAAAGCAGTTCATAAAAACTGTTCGGTACAAACGAGTTACTCCCGGAGGACTGGCACCTTACAGCTGTGACATTTGCGGGAAAGGATTCCAGCATAAGAAGAATATTTGGAAGCATAAAAAGATGTTGCATGCTGACATTGTCGGTGGTTTGGATAAAGCCAACCACAGTGGCAGCAATCAGACCTTCATAAATGCTTCTACAGAAGAAGACGACTATGCTAATGATGACATCGGGGGAGGTCTCTCAATTCCTCAATTTGACAGTTTCAATATGACTGAAATTATGGACCAGCCCATGGTAGAGGAAGTCGAGCAGAGTAATTCACCCGAAGACATGTACCAGTGTGACATGTGTGACAAGAAGTTTGCCGTCAGAAGCAGCATCTGGAAGCACAAGAGAGTGAAGCACGGCATCATCAATCCTGGCCAGGAGGAAGCCGCCGTCTCCAAAGGAGATTATACCAACAGAACCAGCTGTACTTTGTGTAAAATTTCTTTCGCTGACAAGAAAGCATATTATCGACACAGAAAGAATGTGCACAGACTGACAACCCACACATGTAAGATTTGCCAGAAAACGCTGGGCTCTACAATGGAGCTGTATGAGCATTTGAAAACAGCGCACGCCAAGGAGCTGCTGGGCTACAACGAAGGTCCTCGGGCCAGCAGCGAGATGCACCAGCAAGGCAGCGACGAGGACGGCACTGATGGCCAGTATGAAGCCAAGTTCCCCTGTGATACGTGCGGCAAGAGCTTCCTCGGGATGGCTGCCTTACAGAACCACAAGTGCGCTCCTGGACAAGGAGAGAGGTTTGGCTGTGAAATATGTAACAAGAGCTACACGTCCATATCTGCGCTAAAGAGTCATCGCGGCTGGCATTTGAGATCTCCGGATGGCAAAGCGGCTTTTAGTAACTCAGGACTTTGGATGCCTCAACGCCGAGTCTCCAACAAACCTGCTAAACATGATGTCTATGAGGAAACCTCGCAGCCTAGACATTCCACCCCTGTCCCAGAAATAGCTCCTCTGCATATTAAACGGAAGCTGCCTCCTGACATACAGGTAACGGTTCTCAAGAAGAGGAAGCTGAATGATGAAGTGACTATGGAGCTGGTCAAGGCGCCTCCTAAGGAAGATTATCTCACCGTGCAGAGAAAAGCCATTGTAGTAGAGTCGAGAGAAGATCCTTACTGCAACATGTGTGGGAAAGGTTTCACTAAAAAGGCGGCTTATCTCCGACACATGGAAGAAGTCCATCAGCCTAATTCTGTGTTCTGTCCCATCTGTAACAAGAGCTTCACCAGAAAATCTACTCTTCTGATTCACATGAGGAAACATCAAAACGAAACTCTCGTCGATCCCGATGATGAGATGGAGCCGGAAGAAGAAATGGACATGGAAATGGAGATGGAAGAACCGGAACATCTGCAGGTGGTGCAGGAGGCGGAAAAGATGTATGCGTGTGACATTTGTAACTTTAGATATAGTTCTGCCAAGTCTCTGAAGCGGCATTGCATGAAGCATCACAACATCGCGCCGGAAGACATGATCGAGGAGAGGTCTGGCCCGGTGGTCAGCGGGACGAGGACAATCGAGGTGGGAGGACCAAGGCAGAAGTGTGGGCAGTGCGGGGAGGAGTTCACCTGCGAGGAGGACGTGTGGAACCATCGCCACTACCTGTGCTCGCCCTGCGGACAGTACTTCTCCCGGCCGGAGCACCTCGCGGCCCACTCGCGCACCTGCAACCCTGAAGCGGAGAAGGAGAAGCAGTTCTTCTCCTGCACCATGTGTGAGCGCTTCTACCTGACTAAGAAGAGCTTGCAGCGGCACGTCGAGGCTGCACACGCATTCAATTAA
Protein Sequence: MVHDNGSQDELEDEELTVEEALAIAAAAAAEAPRRPPQPILHRVNHGRALMQRPILSHKVMVNKGTFNRPGAVAQLASKDCLVCGRAYRYSHNARRHELNSHNYDRYTNKNNPDKRSDVNKLRPNPYNAKSRLLVNPAHHKLKYGQKMHGKNVMIRIQPHPVRIRSLSEMQRKPHEPQILKSLLTSRPEIVVAEPECIVRSGSESPENLVAEPEITSFQVEDIVTEPDTYNNYEGCDDEDMDDEEGDKEGEEMVMPECEVELSEEVDINKIIGVDTVEKDDHDGADQDGSTSDQLANDADPSAPQVEQQGNLESEIVLGDVGNNDDGDNDKPEDGEDDENDGEMEGSNVEGRLEPLVEAVYPDEANENGIEDGEEGESGEEGGDDEDDLPLVPHLSVIEMNDEQPSDLLEEDNMENGILNESLDIQGIGNPNTITPQQKEFFVNHRDVIEQINTMKCHCCQKSYPRRKAVIQHLQKNGVQVPKHTCYNCVLTFTHIGALLSHMRANCCNNRWRLIYEEGGIPDDMVQEGQPVQEYIAKSANNSLSKSLYKDILNARSYACKLCPSKFQLKQFIMKHIIDVHENGGQRIPLHCQHCRMRFKENRLWKKHVRNGECTVNIACDLCPERFASLQDFTDHAWAVHASGEPSTDQNQTRAVDGRPTECPICHKENSSYHNLVKHLKAIHNEEKPHMCQHCDSKYETVTELNDHIYLQHSDRTPIPSKVDLSIVKHEQTMYNYSCTECAEVFDSVDGWTEHQITVHEHQAYECNQCDKKFLQDSELEEHKNNHLRVRFYTCTLCSNSYGSPQKLSEHMLKTHQGETLNDISDSNPFFCEICLRPFKSPQAYSNHMRIHAVVPTTNRRSGEPTKIVMQKKIVQRPMQKQFIKTVRYKRVTPGGLAPYSCDICGKGFQHKKNIWKHKKMLHADIVGGLDKANHSGSNQTFINASTEEDDYANDDIGGGLSIPQFDSFNMTEIMDQPMVEEVEQSNSPEDMYQCDMCDKKFAVRSSIWKHKRVKHGIINPGQEEAAVSKGDYTNRTSCTLCKISFADKKAYYRHRKNVHRLTTHTCKICQKTLGSTMELYEHLKTAHAKELLGYNEGPRASSEMHQQGSDEDGTDGQYEAKFPCDTCGKSFLGMAALQNHKCAPGQGERFGCEICNKSYTSISALKSHRGWHLRSPDGKAAFSNSGLWMPQRRVSNKPAKHDVYEETSQPRHSTPVPEIAPLHIKRKLPPDIQVTVLKKRKLNDEVTMELVKAPPKEDYLTVQRKAIVVESREDPYCNMCGKGFTKKAAYLRHMEEVHQPNSVFCPICNKSFTRKSTLLIHMRKHQNETLVDPDDEMEPEEEMDMEMEMEEPEHLQVVQEAEKMYACDICNFRYSSAKSLKRHCMKHHNIAPEDMIEERSGPVVSGTRTIEVGGPRQKCGQCGEEFTCEEDVWNHRHYLCSPCGQYFSRPEHLAAHSRTCNPEAEKEKQFFSCTMCERFYLTKKSLQRHVEAAHAFN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -