Afus007912.1
Basic Information
- Insect
- Agapetus fuscipes
- Gene Symbol
- Znf131
- Assembly
- GCA_951799405.1
- Location
- OX637339.1:12856997-12906198[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.012 0.8 10.8 1.6 1 23 109 131 109 131 0.98 2 24 0.0048 0.33 12.0 0.1 1 23 137 159 137 159 0.97 3 24 0.00045 0.031 15.2 0.6 2 23 163 184 162 184 0.96 4 24 0.00029 0.02 15.9 2.1 1 23 190 212 190 212 0.99 5 24 0.0024 0.16 13.0 0.4 2 23 221 241 220 241 0.96 6 24 0.001 0.071 14.1 1.0 3 23 249 269 247 269 0.97 7 24 0.4 27 6.0 1.0 1 11 275 285 275 289 0.86 8 24 0.036 2.5 9.3 1.5 1 23 422 444 422 444 0.97 9 24 0.1 7.1 7.8 0.1 3 23 470 489 469 489 0.96 10 24 0.18 12 7.0 6.0 1 23 495 517 495 517 0.98 11 24 0.012 0.8 10.8 2.8 3 23 527 546 526 546 0.98 12 24 0.025 1.7 9.7 0.7 2 23 552 571 551 571 0.95 13 24 0.00074 0.05 14.6 4.3 1 23 577 599 577 599 0.96 14 24 1.9e-05 0.0013 19.6 1.5 1 23 605 627 605 627 0.96 15 24 4.5 3.1e+02 2.7 0.2 1 17 633 649 633 650 0.86 16 24 0.0077 0.52 11.4 1.8 1 21 731 751 731 753 0.96 17 24 0.36 25 6.1 4.4 1 23 759 782 759 782 0.93 18 24 3.7 2.5e+02 2.9 7.1 2 23 786 804 780 804 0.71 19 24 0.00019 0.013 16.4 2.3 1 23 810 832 810 832 0.98 20 24 0.96 65 4.8 6.8 1 23 841 863 841 863 0.95 21 24 0.051 3.5 8.8 4.6 1 23 870 892 870 892 0.98 22 24 1.1e-06 7.6e-05 23.4 0.8 1 23 898 920 898 920 0.99 23 24 2e-06 0.00014 22.6 0.5 1 23 926 948 926 948 0.97 24 24 0.0092 0.62 11.1 3.7 1 23 954 977 954 977 0.97
Sequence Information
- Coding Sequence
- ATGGTGCTCCGATCACGTGTTTACGGAAAGAGTGCTAAAAAACAGCTACAGGCTCCTCTGAAAGTGCAAGTAAAAATAAAGACTGAAGATATATTGCACGGAGATGTGGACTTCATCGTGGATGAGTGTGCCCTGCCTCCACCAGAAATTTGTGAAGGGGAATGCTCAGAAGACGTTCCATCACACAGCTCTGATGACACTTATAAATATGAAGAACTATTATGCAATCTATCAGAACACGACACTGAGTTGTATTTAAAGGACGTAGAAATTGTGGTGAAGAAAAAgttgaagaagaagagaaagaGGCCCAAAGagCATCGGTACTTCTGTCACGCCTGCCCGTACTCCGCCCCAGAGAGATATCAGCTCAACTACCACATGAGGAGACACACAGGAGAAAAACCTTACAAATGCGATGTGTGTGGCGCCAGGTTTGCCATTGGTGCCACCCTCAGAAAGCACAAGGAGTCGCACAGCAACTGCGTGTGCGACATCTGCGGCAAGCTGTACGTGGACTCGCAGAGCCTGCGCCTGCACCGCGCCACGCACCGTGACACCAAGGCCTTCCAGTGCCACATGTGCGCAGCGGCCTACTGCAGCAGGGCGCAGCTCACCGTGCACATACGCTCACACAACGCCAGCAAGGTCAAGAATGTGCCCTGCAATATCTGTAATAAGATGTTCTACTCGCGGAGCATCAAGGAGCACATGAAGGTGCACACGGTGAGGGAGCAGCTGGCCTGCTCCATCTGCCACAAGGTGTACCTGGGCAAGGGCTCCCTGCAGTCCCACATGCGCCGGCACAGCTCCATCAAGAAGTTCATGTGTGATCACTGCTCCAAGTCCTTCTATGTCAAGGTATCAGAAGGAGATATGGGTCCGCACAAGTTGTGCTCCGTGTGCCTGTACCGCCTCAGGGATGCCTATCTGTTCAGAGAGCAGTGCCAGCAAAGCGAAGACAAACTCCGACAACTTCATACCATCAAAGAAGAAATAAAAATGGATGATTTTGATGAGCCTCCTGATGATTTTGAATCAACGTTTTCTGACTGCGAGTTGCCGCAAGTGAAAATTGTAACAACATATATCAGGGATAAATCAAGAGATGTGAAAAGAGAAAATTTAGTTTACAAGATGTTGCCAGGTCACGAAACAGCAGAAGACAGCTTGCAGCTTAAATATTCTGGAAGTAAATCTTTACAAGTTAAAAAAACAGAAGCCATAGACAAAAAAGAGACTGATAAAACCATAGAGGCCAGATATTTCTGTGACGCTTGTCCCTACGCAACCACAGAGAGATACATGCTGAAGGAACACATGCACCGCCATACGGGAGAAAAACCTTTCAAGTGTGACCTCTGTGAGGCGTTGCATCAGCACAAGCTGTCTCACGTGAGTGCCATCTGTGAGGTGTGTGGCAAGGTGCTGGAGAGGAGGAACCTGGACGTTCACCTGTCCACCCACAGCGGAGTCAAGCCCTTCCACTGCCACATGTGCGCGGCCACCTTCCACAACCGCATGCGCCTCAACGCGCACATCAAGTCACACACACTGGTCAAGGTCAAGGATCAGCTGTGCCATATATGCAATAAATTATTCTACGCCCGTGACTTGAAGAAGCACATCAAGTACCACTCCAGGCCGCTGGTCACGTGCAACATCTGCAACAAGAGTATGAAGGGGAACCTGAAGGCGCACATGATGCGGCACACGGACAGCAAGAAGTACATGTGCGACTGCTGCACCAAGACATTCAGGAATAAGTCGGACATTCAAAAGCACATGCTGTCTCACTTTGGAATAAAGAAGTTCAGCTGCGACATTTGTGACAGAAGCTTTGTCCACAAGAGCTCGCTGGTCTCCCACAAGGTGATGCACTCCAAGACCAGAGATCATGTGTGCGACGTCTGCAATCAAAGACTGAGAGACGCCTTTTCATTTCGTAGTCTATGCCAGCGCAGTGAAGCAACACTGCGGGGGATGGAACACCTCAAACATGAAATTAAACCAGAGGGTTTCTCAAACGCATTAGACATTAGTTTCCCCATAGCCACGTCAGATTGTCATCGCACAGAGGTGGACAGTGTCTGCCAGGATTATGACGACGATGACTCCACATCCTTCCTGCCCCTCTCCAGACTAAAGACTGAGGAACTGGAAGTCATCCACCAAAAGGAAGAGGACAGGTACTACTGTGACATATGTGTGTATTCCGCCAAGAACCAGTACCAGCTAATCAACCACATTCGCTGCCACACAGGAGAGAAGCCATTCCAGTGCGACTCCTGTGACAAAAAATACCCTAGCAAGATTTCCCTGCGCTGCCATGTAGAGAAGTGCCACAACGCCCCTGTGTGTGATCTGTGTGGCAAGGTGTACCGCCACCTGAAGCAGCACCGCCTCACACACACGCAGAACAAGGACCACCAGTGCAACATGTGCGTGGCCACCTTCTACACCCTCAGCCAGCTCAACCAGCACCTCAAGATGCACAACAAGGCGGCCAGGGTGCGCAGATATCCCTGCCATCTGTGCAACAAGTTGTTCTACACATCCAATGACTGCAAGAAGCACCAGGACTTCCACAACACCAACAAGAAGATGCACACCTGCCACATGTGCCTGAAGCAGTACTCCAGCAAGGCCATCCTGGCCACCCACATGAAGAAGCACACGGGCATCAAGAAGTTTAAGTGCGACCACTGCGGGAAGGCGTTCCCCTCCAAGGCTGAGATAAGGAGTCACATGATCACACATCTGGGTAAGAAGACGTTTGAGTGTGACGAGTGTGGCAAGAGCTTTGTGAGGAAGAACTCTCTGGCCACACACAAAATCAGTCACGCCAAGACCAAGAACTTTGTGTGCGAGATCTGCAACCAGAGGTTTGCGCACGGAGGCAGTCTGTGTGAGCATAAAAAGAAGAAACACAACATCATCAGTAACAGGAGTATAGAGCCAGTATCTCTCATCAACCCATACAAGTGA
- Protein Sequence
- MVLRSRVYGKSAKKQLQAPLKVQVKIKTEDILHGDVDFIVDECALPPPEICEGECSEDVPSHSSDDTYKYEELLCNLSEHDTELYLKDVEIVVKKKLKKKRKRPKEHRYFCHACPYSAPERYQLNYHMRRHTGEKPYKCDVCGARFAIGATLRKHKESHSNCVCDICGKLYVDSQSLRLHRATHRDTKAFQCHMCAAAYCSRAQLTVHIRSHNASKVKNVPCNICNKMFYSRSIKEHMKVHTVREQLACSICHKVYLGKGSLQSHMRRHSSIKKFMCDHCSKSFYVKVSEGDMGPHKLCSVCLYRLRDAYLFREQCQQSEDKLRQLHTIKEEIKMDDFDEPPDDFESTFSDCELPQVKIVTTYIRDKSRDVKRENLVYKMLPGHETAEDSLQLKYSGSKSLQVKKTEAIDKKETDKTIEARYFCDACPYATTERYMLKEHMHRHTGEKPFKCDLCEALHQHKLSHVSAICEVCGKVLERRNLDVHLSTHSGVKPFHCHMCAATFHNRMRLNAHIKSHTLVKVKDQLCHICNKLFYARDLKKHIKYHSRPLVTCNICNKSMKGNLKAHMMRHTDSKKYMCDCCTKTFRNKSDIQKHMLSHFGIKKFSCDICDRSFVHKSSLVSHKVMHSKTRDHVCDVCNQRLRDAFSFRSLCQRSEATLRGMEHLKHEIKPEGFSNALDISFPIATSDCHRTEVDSVCQDYDDDDSTSFLPLSRLKTEELEVIHQKEEDRYYCDICVYSAKNQYQLINHIRCHTGEKPFQCDSCDKKYPSKISLRCHVEKCHNAPVCDLCGKVYRHLKQHRLTHTQNKDHQCNMCVATFYTLSQLNQHLKMHNKAARVRRYPCHLCNKLFYTSNDCKKHQDFHNTNKKMHTCHMCLKQYSSKAILATHMKKHTGIKKFKCDHCGKAFPSKAEIRSHMITHLGKKTFECDECGKSFVRKNSLATHKISHAKTKNFVCEICNQRFAHGGSLCEHKKKKHNIISNRSIEPVSLINPYK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -