Basic Information

Insect: Agapetus fuscipes
Gene Symbol: -
Assembly: GCA_951799405.1
Location: OX637359.1:7075829-7086398[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00019 0.013 16.4 2.1 1 21 47 67 47 68 0.95

2 13 0.024 1.6 9.8 6.3 1 23 162 185 162 186 0.96

3 13 0.0052 0.35 11.9 2.5 2 23 193 214 192 214 0.96

4 13 3e-06 0.00021 22.1 1.1 2 20 221 239 220 241 0.94

5 13 3.6e-06 0.00024 21.9 0.3 1 23 252 274 252 274 0.95

6 13 2.9e-05 0.002 19.0 0.5 1 23 284 306 284 306 0.99

7 13 0.00019 0.013 16.5 2.7 1 21 312 332 312 334 0.94

8 13 8.3e-06 0.00056 20.7 1.3 1 23 340 362 340 362 0.98

9 13 6.7e-06 0.00046 21.0 2.1 1 23 368 390 368 390 0.96

10 13 0.00012 0.008 17.1 3.6 1 23 396 419 396 419 0.96

11 13 0.00011 0.0072 17.2 3.0 1 23 425 449 425 449 0.98

12 13 0.003 0.2 12.7 2.7 1 23 455 477 455 477 0.99

13 13 8.6e-06 0.00058 20.7 1.0 3 23 485 506 484 506 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00019	0.013	16.4	2.1	1	21	47	67	47	68	0.95
2	13	0.024	1.6	9.8	6.3	1	23	162	185	162	186	0.96
3	13	0.0052	0.35	11.9	2.5	2	23	193	214	192	214	0.96
4	13	3e-06	0.00021	22.1	1.1	2	20	221	239	220	241	0.94
5	13	3.6e-06	0.00024	21.9	0.3	1	23	252	274	252	274	0.95
6	13	2.9e-05	0.002	19.0	0.5	1	23	284	306	284	306	0.99
7	13	0.00019	0.013	16.5	2.7	1	21	312	332	312	334	0.94
8	13	8.3e-06	0.00056	20.7	1.3	1	23	340	362	340	362	0.98
9	13	6.7e-06	0.00046	21.0	2.1	1	23	368	390	368	390	0.96
10	13	0.00012	0.008	17.1	3.6	1	23	396	419	396	419	0.96
11	13	0.00011	0.0072	17.2	3.0	1	23	425	449	425	449	0.98
12	13	0.003	0.2	12.7	2.7	1	23	455	477	455	477	0.99
13	13	8.6e-06	0.00058	20.7	1.0	3	23	485	506	484	506	0.97

Sequence Information

Coding Sequence: ATGAGTGGACTACGGAAATCGTCTCGTTTATCATCCAACGTCGACACATCAAAGGACTATACAATAGTCGTAATCAAGTCATCGAGCGACGGAAAGCCAGCCCAGCAAGTGGCGCACCTGAAGACTTCCCTCATCCAGCACATGTGCAACAAATGCGACAAAAAGTACACAACATCCATCGGCCTCAAAAGACATCTCAAGTTCTGTAGCGAAGCCAACGGGGACATATCCCTTCACATTCCAAAGGGTACGGTAACAGAGAATCACAATGATATCAACTCCAAgaatttgaattttgtggaTGAAATTAGTCCACCAGAATACGAAGAAGATTTGCTTGAAAAGCAGGCAGCTCTGAAAGAGAAATCGGTGAATCCGTATGATTTTGATGAGGAGAATAATTCCGATGAGAATAAGGATGGTGCGGGTGATTGGTGCGAGTGTTGCGGGGAAGATAAGGCTACGGCGCATAAGGCTGGCGAGTTCAAATGTGTCGTCTGCAACAAGTACTACAAACACCGCGAGTCCTACGAGACGCACCTGGAGAAGTTCCACCACCTGGGCCCCGGTGCCTGCGTCTGCCCCCACTGCCCCATCAGTTGTCCCGACAAAGTGACGCTGTATGAGCACGAGCAGACGCACTCTCCGCACAAGCTGATCGAGTGCAAGGTCTGCAAGAAGACCTTCACCAGGAAGTATCACCTCGAGAGGCATCTGGTGCAAAAGGGGTGCGATGGTAGACCCAAGAGTAGCTTCCTATGTCGGGTTTGCGGCGCTGAATTCAGTCGTAAGGACAACTTGCGTGAGCACCTGAGGATACACGCCGGCAGCATCTTGCCCAGGAAGAGCTATCCCTGCCCATACTGCAGCAAGGAGTTCAAGGGGAAGACCATGATCACCATTCACCTCAGGACACACACCGGTGAGACTCCGTTCACATGCAAGACCTGCCCCAAAGGCTTCAAGTCCAAGGGGGCCCTCATCAAACATGAGCGCTGCCACACAGGAGAGAAGCCCTATTCTTGCGTCAAGTGCGATAAGAAGTTTGCAGCTAAAGAGACCCTAAACCGCCATCTGAAGACGCACCTGGCGAACAAGCCGCATGTGTGCCAACAGTGCGGCAAGAGCTTCATACAGCTGACGCAGCTCAAGGCACACATGTTCTACCACACCGGGGAGAACGCATTCCAGTGTGATCACTGCAACCGCAACTTCAACAGGAAGAGAGGATTGGAGATCCATGTGAAGTATTTCCACGAGGGAGCTGTTATGTACAAGTGCACGCAGAAAGGTTGCAAAAAGACCTTCAAGAGGAAGGAGGACAGGAAGAGACACCTCATCATACACTCTGACGTCAAACCGTTCAAATGCTGCCTGTGCATCAAGATGTTCAGGACAAAGGCTCTGATGATGGCGCACGTCCGCACACACCGCGTGGAGGCGCCCAGGGCCTGCCCTCGCTGTCCCCGCGCCTTCATCCGGGCAGACTGTCTGCTGAGGCACATGAGGACCAAGCACCCGCAGCAGTACAAGGCGGTGCTGCACGAGACCAAGAGGAAGAAGCTTGAGACCATGAAAGCCAAACTGAGGAGCACATCCAAGCAGGATTCCTCCCGCCTGGGCACCAGCAGGCTGAACCTGCTAAGCAGGGAGTTCCCCGATGTCAGCGAGGCCTCACAGCTGGAGCACCCGCCAGAGTACGAGCTGGACGAGAGAATTGTGATCGCGCCCATGGAGACGAGGCTCAGGAACAGGGTCATGATTGACGCGCGGGCTATGGAGAAGATGGAGTCCATGGAGGATAATGGACCTGAGGAACAGGAAGTAGATCTGCCGTTGAGTGAAGCGTTCCTCTGCAATGCTATACAAGAGTTGTTGGAGTATCTAGTGGACAACAACTTCCTGGAGCAGTTCAACTGGTCCGACCTTTCCGTGGATGAGACCTTGATTGACATCATAGAGAAGTGTGGCTACACAGCCATAACGGCGGCCGAGCAAGCGGACCGCGGTCAGCGACTGCGGGAGAACGCTCGCCTGCTGCTCAAGGAGGTCATCAATGATGCCAGGGTCGTGCACCAGCTGGACACCTGCGACACCGTGGACGAGGTCATCCTGCAGGTCAACAATACTCTGCAGCGCAACGCCTACAGGCAGTGA
Protein Sequence: MSGLRKSSRLSSNVDTSKDYTIVVIKSSSDGKPAQQVAHLKTSLIQHMCNKCDKKYTTSIGLKRHLKFCSEANGDISLHIPKGTVTENHNDINSKNLNFVDEISPPEYEEDLLEKQAALKEKSVNPYDFDEENNSDENKDGAGDWCECCGEDKATAHKAGEFKCVVCNKYYKHRESYETHLEKFHHLGPGACVCPHCPISCPDKVTLYEHEQTHSPHKLIECKVCKKTFTRKYHLERHLVQKGCDGRPKSSFLCRVCGAEFSRKDNLREHLRIHAGSILPRKSYPCPYCSKEFKGKTMITIHLRTHTGETPFTCKTCPKGFKSKGALIKHERCHTGEKPYSCVKCDKKFAAKETLNRHLKTHLANKPHVCQQCGKSFIQLTQLKAHMFYHTGENAFQCDHCNRNFNRKRGLEIHVKYFHEGAVMYKCTQKGCKKTFKRKEDRKRHLIIHSDVKPFKCCLCIKMFRTKALMMAHVRTHRVEAPRACPRCPRAFIRADCLLRHMRTKHPQQYKAVLHETKRKKLETMKAKLRSTSKQDSSRLGTSRLNLLSREFPDVSEASQLEHPPEYELDERIVIAPMETRLRNRVMIDARAMEKMESMEDNGPEEQEVDLPLSEAFLCNAIQELLEYLVDNNFLEQFNWSDLSVDETLIDIIEKCGYTAITAAEQADRGQRLRENARLLLKEVINDARVVHQLDTCDTVDEVILQVNNTLQRNAYRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -