Afus010585.1
Basic Information
- Insect
- Agapetus fuscipes
- Gene Symbol
- ZBTB41
- Assembly
- GCA_951799405.1
- Location
- OX637343.1:8402930-8414318[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.23 16 6.7 1.1 1 23 139 161 139 161 0.96 2 16 0.061 4.1 8.5 1.2 2 23 171 193 170 193 0.93 3 16 0.00042 0.029 15.3 6.8 1 23 199 221 199 221 0.98 4 16 6.4e-05 0.0043 17.9 0.3 3 23 245 264 244 264 0.98 5 16 0.0027 0.18 12.8 0.5 1 23 270 295 270 295 0.94 6 16 0.00021 0.014 16.3 1.0 2 23 305 326 304 326 0.95 7 16 0.022 1.5 10.0 4.5 1 23 332 354 332 354 0.97 8 16 4.4e-05 0.003 18.4 0.3 1 23 360 383 360 383 0.94 9 16 2.9e-05 0.002 19.0 2.7 2 23 390 411 389 411 0.97 10 16 9e-07 6.1e-05 23.7 0.9 1 23 417 440 417 440 0.94 11 16 0.025 1.7 9.7 0.3 1 23 451 473 451 473 0.98 12 16 0.00032 0.022 15.7 4.1 1 23 477 499 477 499 0.98 13 16 5.5e-05 0.0037 18.1 0.9 1 23 506 529 506 529 0.95 14 16 4.8e-05 0.0033 18.3 0.2 2 23 537 558 536 558 0.96 15 16 2.5e-05 0.0017 19.2 0.3 1 23 564 586 564 586 0.98 16 16 0.22 15 6.8 0.3 1 23 592 614 592 614 0.97
Sequence Information
- Coding Sequence
- ATGTGCCGAAAAGGTTGTGCCGTAAAGAATGAGGAGAGCAATACAAAGAAACCGAGAACAGCAGATGATAGTCAGACGGAAGCATGCGGAGAAGAAGGATTCGTGCTTTTAGTTGgagATGATTCGAGTTTGGCCACAGGATTCGAAAACTACTTTAAAATTGACGATGGAGTTGCCAGTGCTCAAATCCGAAATAAAGCAAACGTCAAAAAGGAAATAACATCTGAAGATGGTGTGAAAGAAGAATCAGCTTGTGAAGACGCAGTTGGCGATCATGAAGATGCTGGTGAAACAAAGAAAGAAGCTGTTGATGATTATGAATCGGGTGATGAAAGTTGGAACGAAGGGGATGATGCAGAAGTTACGGCTAAAACTAAGagaGCTACTTTACGTGGCGCCATCAAAGCCGTGACATTTCCATGCCGTAAATGTGAACGGCATTTCCTGTCATGGCCTGAGCTGTCGGAACACAATCAGAGCCATGACCAGGCGACTGCAACCGCTGATTCCGTTTGCAGATACTGCCAGATAACCTTCAGACATCCCAGGTTTGTTTACAGCCATATAGTCAAGGTGCACCCGGATGAAGACAGGTTCCAGTGCGGCCACTGCGATGTGAGGTTTTCCAGTCACAAGCTGCTGAGGATACACATGCATCGTCATCAGGATACTCAACCACCAGAGGAGGCTGAAACTAAACATATTGCTGGGAAGAAGTCCACCCGGGTGGCGTGCAGCCTGTGTGACAAGGTTTTCCGGCAGACAGCTCTCAGCCGGCACATGGCCACACATGACCCTGATAAACCATTCTACTGCAAGGTTGGCAGATGCAAGTGGTCATTTTCCACGGAGCATGATTTGGCGGTACACGGCATGGTGAACCATTCAGATCCAGCTGAGGATGCGTCCCTCGTGTGCCTGTTTTGTCGCAAGGCATTCTCTGGACGTCGCAACCTGCGGCAACACATGCTGCAACACAAGCCCAGCAAGCGCTTCAACTGCAGCTTTTGTGCTAAAGGCTTCAACTTTATCCACCATCTGCAGAACCATGAGAGGATCCACACCCGCGAGCAGCCCTTCCTCTGCACAGAATGCGGACTGGCTTTCACCACCAGCGATGGCCTGGCGTCCCACACCCGCAACAAGCACATCTGGGAGAAGCCCCTGACCTGCGAGCACTGCCAGAAGAAGTTTGCCGACAAGACCCGGCTGAGGATACACATGGAGACACATAACAACAGCGACAAGTTCATGTGCTCCGAGTGCGGCAAGATCTTCAACAAGAGCAGCAACCTGAAGAAGCACGTCAGCAACGTGCACCAGCGCTGCCTGCAGAACAACCGGCAGAGGTACAGCTGCGACGTGTGTGGGGACGTGTCCCACAATATGCAGCAGCTCTCCAGACACATGGCGGTCCACACGTGCAAGTACTTTTGCCACCATTGTTTGAAGAGCTTCTCTATACCATCAGCGCTGGATAAACATCTCAAGTCACACTTTGAGGGAGACAGGAGTCACGTGTGCAATGTGTGCGGGGCGGCATTCAACCGGCCGGACCACCTGCGCGGGCACACCTCTCGCCTGCACAGCGCGGGCAGCCGGCCTCTCAGCTGTGCCCACTGCGGCCGGGGCTTTGTGAGGGCGCAGGACCTGGCCGAGCACACCAGGATCCACACTGGCGAGAAGCCCTTCAAGTGCAAGGTGTGTGGGAAGAGCTACGCACGCGGGCGCGCCCTGAAGATCCACGAGCGCGCGCACACGGGCGAGCTGCCTTACATCTGCGGGGTGTGCCACGCGGGGTACAAGTGTGCGCCGGGCCTCGCCAGCCACATGCTGACACACAGCACCCCCATCACGCACATGAATGAAATCGAAGGTGAAGACACCAAGGACTTTGAAAGAAGTACATCGTCTATTCACATTTCATACACAGAAGTGGCTTAA
- Protein Sequence
- MCRKGCAVKNEESNTKKPRTADDSQTEACGEEGFVLLVGDDSSLATGFENYFKIDDGVASAQIRNKANVKKEITSEDGVKEESACEDAVGDHEDAGETKKEAVDDYESGDESWNEGDDAEVTAKTKRATLRGAIKAVTFPCRKCERHFLSWPELSEHNQSHDQATATADSVCRYCQITFRHPRFVYSHIVKVHPDEDRFQCGHCDVRFSSHKLLRIHMHRHQDTQPPEEAETKHIAGKKSTRVACSLCDKVFRQTALSRHMATHDPDKPFYCKVGRCKWSFSTEHDLAVHGMVNHSDPAEDASLVCLFCRKAFSGRRNLRQHMLQHKPSKRFNCSFCAKGFNFIHHLQNHERIHTREQPFLCTECGLAFTTSDGLASHTRNKHIWEKPLTCEHCQKKFADKTRLRIHMETHNNSDKFMCSECGKIFNKSSNLKKHVSNVHQRCLQNNRQRYSCDVCGDVSHNMQQLSRHMAVHTCKYFCHHCLKSFSIPSALDKHLKSHFEGDRSHVCNVCGAAFNRPDHLRGHTSRLHSAGSRPLSCAHCGRGFVRAQDLAEHTRIHTGEKPFKCKVCGKSYARGRALKIHERAHTGELPYICGVCHAGYKCAPGLASHMLTHSTPITHMNEIEGEDTKDFERSTSSIHISYTEVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -