Basic Information

Insect: Agapetus fuscipes
Gene Symbol: -
Assembly: GCA_951799405.1
Location: OX637339.1:12980160-13006356[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00034 0.023 15.6 0.7 1 23 207 229 207 229 0.95

2 12 0.00032 0.022 15.7 0.4 1 23 237 260 237 260 0.98

3 12 0.0034 0.23 12.5 4.4 1 23 266 288 266 288 0.97

4 12 1.5e-05 0.00099 19.9 2.7 1 23 294 316 294 316 0.99

5 12 7.4e-06 0.00051 20.8 2.0 1 23 323 345 323 345 0.99

6 12 7.2e-05 0.0049 17.8 0.2 1 23 351 373 351 373 0.93

7 12 2.8e-06 0.00019 22.2 0.3 1 23 379 401 379 401 0.98

8 12 1.1e-06 7.5e-05 23.5 0.5 1 23 407 430 407 430 0.96

9 12 9e-05 0.0061 17.4 4.8 1 23 436 459 436 459 0.96

10 12 2.7e-06 0.00018 22.3 1.6 1 23 465 487 465 487 0.99

11 12 1.2e-05 0.00081 20.2 0.6 1 23 493 515 493 515 0.97

12 12 0.0017 0.11 13.5 0.2 1 22 521 542 521 545 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00034	0.023	15.6	0.7	1	23	207	229	207	229	0.95
2	12	0.00032	0.022	15.7	0.4	1	23	237	260	237	260	0.98
3	12	0.0034	0.23	12.5	4.4	1	23	266	288	266	288	0.97
4	12	1.5e-05	0.00099	19.9	2.7	1	23	294	316	294	316	0.99
5	12	7.4e-06	0.00051	20.8	2.0	1	23	323	345	323	345	0.99
6	12	7.2e-05	0.0049	17.8	0.2	1	23	351	373	351	373	0.93
7	12	2.8e-06	0.00019	22.2	0.3	1	23	379	401	379	401	0.98
8	12	1.1e-06	7.5e-05	23.5	0.5	1	23	407	430	407	430	0.96
9	12	9e-05	0.0061	17.4	4.8	1	23	436	459	436	459	0.96
10	12	2.7e-06	0.00018	22.3	1.6	1	23	465	487	465	487	0.99
11	12	1.2e-05	0.00081	20.2	0.6	1	23	493	515	493	515	0.97
12	12	0.0017	0.11	13.5	0.2	1	22	521	542	521	545	0.91

Sequence Information

Coding Sequence: ATGTTATCCTTCCAGCGGACGGCAACAGTTTCATTCGCCTGGACGCCTCTTCCTGCTCAGCAAGGGCCTGAGCTTCTCCTCCGCAGGCACCAACATCAAGCTGCACGACTCCCCGACAAGGGAATCATAGTGCTGGACAAGGAGAAGGACACTCCTCAAGGCACCAACATCAAGCTGCACCACTCCCCCGACAAGAGAATCATAGTGCTGGACAAGGAGAAGGACACTCCTCAAGGCACCAACATCAAGCTGCACCACTCCCCCGACAAGAGAATCATAGTGCTGGACAAGGAGAAGGACACTCCTCAAGGCACCAACATCAAGCTGCACCACTCCCCCGACAAGAGAATCATAGTGCTGGACAAGGAGAAGGACACTCCTCAAGGCACCAACATCAAGCTGCACCACTCCCCCGACAAGAGAATCATAGTGCTGGACAAGGAGAAGGACACTCCTTTGGTGCAGCTGCTCTCCCTGGACGTGTTTGAGTGCCTGGTGTGCGCGGAGCTGGTCAGCAGTAAGGCCATGGAGGAGGCCGGCACCACCATCACCGCCAAGGTCACGGGCAGCTCCAAGTTCATGACGGTGCACATGCGCAGCGAGCACGACACCCGCATCTACATCTGCGACATCTGCTTCCAGGTCTTCAGGAGGAAGTCCCTCATGACGGATCATTATGATGAGCACCTGGTGAATGACCACGGGGACTTCAAGTGTGAGGTGTGCAGCATGGAGTTTGGGAACCTGCGGCTGCTGCGGGCGCATCGCCGCATCAACCACACAATCCACAAGCAGCACCACTGCAGCATCTGCAACAAGAAGTTTGGGTCCAGGAACCTGCTGGAAGAGCACAACAACACGCACAATGGTGTGAGGCCGTACTCGTGTGAGCTCTGCTCCAAGACATTTGCCTCCAAGTACACCTACCAGTCCCATCTCAAGACACACATGTACCGGCCGCGCCCCTTCAAGTGCAACCAGTGCGGCAAGGCGTTCTTCACCCTGCAGAACCTCTCCCAGCACGAGAAGACCCACCTGGGGATCAAGGACTTCATCTGCCTCAAATGCGGCAAGGCGTTTGGCACCCAGCACAACTTGGAGGTGCACGGTGTAGTCCACACAGGCTTCAAGCCCTACAACTGCTCCATCTGCGGGAAGTCATTTGCCCGGCGCGGCGAAATCAGGGACCACGAGAGGACACACACAGGAGAGCGCCCCTATGTGTGTGAGCTGTGTGGAGCCACCTTCTCCCAGAGGAGCAACCTGCAGTCCCACAAGAGAGCCACGCACTTTGATGACAAGAGATACAAGTGCCATTCCTGCGATAAGAGCTTCAAGAGGAGGAGGCTGCTGGAATACCACACCAAGGCGTCCCACACGGGTGAGCGCCCATACCGCTGCGAGGTGTGTGACGCCACCTTTGTCTACCCCGAGCACTTCAAGAAACACCAGCGCATCCACAGCGGGGAGAAGCCCTACAAGTGCGAGGTGTGTGGGAAGGCGTTCAACTCCCGGGACAACCGCAACGCCCATCGCTTCATCCACTCTGACAAGAAGCCCTACGAGTGCCTGGACTGTGGGGCTGGCTTCATGAGGAAACCTCTGCTCTACGCCCACATGCACTCCCTGGGTCACCTGAGTGACACCATAGTGGTGAACCAGCCGCGCATCAGCGGGGACATGGACACCGTGAAGAACAAATACGACGCTGGCAACACCTTCATCCTGGATGATGGGCAGGAGGTCATCATTAATAACATCAACACTATTAAACAGGAGATTCCTGCCAACAACAAGCTGGTGAAGAAGAGGGTTATCACCATAAACAAGGCGCCCCAGACAAGCCAGCAAATCATGGAAACGGACGACATGTTTGAGCTGGAGACAGTGCAGGAGGAGGAAGAGGAGCAACAGGAGGTCACCGACATCAACATCTCATCCCAGGGGCACATCCTGCTGCAGACAGGCAATGTGCTGAAGACGGAGATAGAGGAAGATGCTCTGACTGATGAGCAGTTCCTGGAGGGAGCGGAGGACGCCATTATAGCCACAGACGAGGAGCTGCATCATCAGGTAGCCTCACAACCAGTTCTCCCTAGACACACTCCGCCCGGTTTGTCTATAGCGTTCCTATCCGGCGAGGGCGCCAGGTTGAATATCAGTAGTATAATACAGTCTGAAGATGGCACGCTGATCAGGCTGGTGGAGATCAAGCTGGCAGATGGAGAGAGCAGGTGGGTGGCGCTGGACACCTGA
Protein Sequence: MLSFQRTATVSFAWTPLPAQQGPELLLRRHQHQAARLPDKGIIVLDKEKDTPQGTNIKLHHSPDKRIIVLDKEKDTPQGTNIKLHHSPDKRIIVLDKEKDTPQGTNIKLHHSPDKRIIVLDKEKDTPQGTNIKLHHSPDKRIIVLDKEKDTPLVQLLSLDVFECLVCAELVSSKAMEEAGTTITAKVTGSSKFMTVHMRSEHDTRIYICDICFQVFRRKSLMTDHYDEHLVNDHGDFKCEVCSMEFGNLRLLRAHRRINHTIHKQHHCSICNKKFGSRNLLEEHNNTHNGVRPYSCELCSKTFASKYTYQSHLKTHMYRPRPFKCNQCGKAFFTLQNLSQHEKTHLGIKDFICLKCGKAFGTQHNLEVHGVVHTGFKPYNCSICGKSFARRGEIRDHERTHTGERPYVCELCGATFSQRSNLQSHKRATHFDDKRYKCHSCDKSFKRRRLLEYHTKASHTGERPYRCEVCDATFVYPEHFKKHQRIHSGEKPYKCEVCGKAFNSRDNRNAHRFIHSDKKPYECLDCGAGFMRKPLLYAHMHSLGHLSDTIVVNQPRISGDMDTVKNKYDAGNTFILDDGQEVIINNINTIKQEIPANNKLVKKRVITINKAPQTSQQIMETDDMFELETVQEEEEEQQEVTDINISSQGHILLQTGNVLKTEIEEDALTDEQFLEGAEDAIIATDEELHHQVASQPVLPRHTPPGLSIAFLSGEGARLNISSIIQSEDGTLIRLVEIKLADGESRWVALDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -