Basic Information

Insect: Agapetus fuscipes
Gene Symbol: -
Assembly: GCA_951799405.1
Location: OX637335.1:6601988-6629265[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00063 0.043 14.8 1.4 1 23 169 192 169 192 0.97

2 20 0.36 24 6.1 3.6 1 23 192 219 192 219 0.94

3 20 1.1e-05 0.00077 20.3 0.3 2 23 226 247 225 247 0.95

4 20 0.084 5.7 8.1 0.5 1 23 255 277 255 277 0.98

5 20 0.00051 0.035 15.1 0.1 2 23 287 309 286 309 0.94

6 20 0.0001 0.0068 17.3 1.5 1 23 315 337 315 337 0.98

7 20 2.1e-07 1.4e-05 25.7 0.3 1 23 343 365 343 365 0.97

8 20 0.017 1.2 10.3 0.2 1 23 370 392 370 392 0.98

9 20 0.00057 0.039 14.9 3.5 1 23 397 419 397 419 0.96

10 20 0.00022 0.015 16.2 3.3 1 23 425 448 425 448 0.97

11 20 7.4e-05 0.005 17.7 1.7 1 23 696 719 696 719 0.97

12 20 0.14 9.9 7.4 3.9 1 23 719 746 719 746 0.94

13 20 1.1e-05 0.00077 20.3 0.3 2 23 753 774 752 774 0.95

14 20 0.031 2.1 9.4 1.3 1 23 782 804 782 804 0.98

15 20 0.015 1 10.5 0.3 2 23 814 836 813 836 0.96

16 20 0.00088 0.06 14.3 1.6 1 23 842 864 842 864 0.98

17 20 7.6e-07 5.2e-05 24.0 1.0 1 23 870 892 870 892 0.97

18 20 0.0087 0.59 11.2 0.3 1 23 897 919 897 919 0.98

19 20 0.21 15 6.8 6.0 1 23 925 947 925 947 0.94

20 20 0.0019 0.13 13.3 3.4 1 23 953 976 953 976 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00063	0.043	14.8	1.4	1	23	169	192	169	192	0.97
2	20	0.36	24	6.1	3.6	1	23	192	219	192	219	0.94
3	20	1.1e-05	0.00077	20.3	0.3	2	23	226	247	225	247	0.95
4	20	0.084	5.7	8.1	0.5	1	23	255	277	255	277	0.98
5	20	0.00051	0.035	15.1	0.1	2	23	287	309	286	309	0.94
6	20	0.0001	0.0068	17.3	1.5	1	23	315	337	315	337	0.98
7	20	2.1e-07	1.4e-05	25.7	0.3	1	23	343	365	343	365	0.97
8	20	0.017	1.2	10.3	0.2	1	23	370	392	370	392	0.98
9	20	0.00057	0.039	14.9	3.5	1	23	397	419	397	419	0.96
10	20	0.00022	0.015	16.2	3.3	1	23	425	448	425	448	0.97
11	20	7.4e-05	0.005	17.7	1.7	1	23	696	719	696	719	0.97
12	20	0.14	9.9	7.4	3.9	1	23	719	746	719	746	0.94
13	20	1.1e-05	0.00077	20.3	0.3	2	23	753	774	752	774	0.95
14	20	0.031	2.1	9.4	1.3	1	23	782	804	782	804	0.98
15	20	0.015	1	10.5	0.3	2	23	814	836	813	836	0.96
16	20	0.00088	0.06	14.3	1.6	1	23	842	864	842	864	0.98
17	20	7.6e-07	5.2e-05	24.0	1.0	1	23	870	892	870	892	0.97
18	20	0.0087	0.59	11.2	0.3	1	23	897	919	897	919	0.98
19	20	0.21	15	6.8	6.0	1	23	925	947	925	947	0.94
20	20	0.0019	0.13	13.3	3.4	1	23	953	976	953	976	0.97

Sequence Information

Coding Sequence: ATGCTATGTGGCCAGTGCAGTAACAAAATTATAGATTTTCACCAGTTTGCTCTGAAGTGTAAAGAAACACAGATATACTTGGAACAACTGTCGGATACTGCACTGCTCCCAGATGTCAAACAGGACGATGTGAAAACGATAACTGTGTTAAAAACGGTTCCTGTCACCATCAAAGAGGAAATAGACAACTCGAGTGACGATGATGCAAAGAATAGTGAAGACTTTATTCCGCTCGCTGACTTTGAGGAGAATCGGCAGAAAGTCAAAAGTAAAAGTGTGAACAGGAAAAGGTTGAAGAGGAAATGCACGGCAGTCAGTAAACAGATGTTGGAAGAAGAGATCAAGCAAGAATTGTCGGATAGAAGAGCGGAGAGTGTAAAATCATTGATCAATACAACAGGCGTACGAGTTCCAGATGAGTTTGATTCTAAAACACTTAAATACGTGAAACATGAAGAAACCTTTAAGGACGAAGATATGGTGTGTGGAAATCAGCAAAATGGATTCTATTGTAACTTTTGCGACTCTGAATTCTCCAACTGGAACTCGTTAAAGTTGCACTCAAGGCGTCAGCACAAATGTAAAGCCAAGGCCACCTGCATCTGCTCCAAGACCCTCATGACCAGCAAGTCGGTGCAGCAACACATGCTCAAGCACAACCCTGCCAGTGTGTCAAGCTGTGAAACCTGCGGCAAGATATTCTCCACGCCCTCTGAACTGTCGCGACATTCCATCTCGCACATACCAAAGGAAGAACTACCATTTGTGTGCTGCACGTGTGCTAAGGGATTTGCCACGGCCCGCATACTGAAGGTTCACGAGCGCATCCACACTCCCAAGGAACTCAGATACAAGTGGCCTTGTCCAAACTGTGAACTGAAATTCACATATAAAAGTGGACTGGCCACACATGTACGTGCTGTGCATGACAAGATGAAGCCGTTTGTGTGTGACCTGTGCGGGCATCCGTGCAGCACCAAGGGCAATCTGGAAGTGCACAGGATTAGACATGGGACGGTTAAGAACTTCATATGCGAGATCTGTGACAAAGGGTTTAAGACCAAGGGGTCCCTCCAGCGCCACATGGACATCCACAGCGATGCAGTCTACCAGTGCCCGCAGTGCCCGGTGCTGCTCAACTCCAAGATGACGCTGCGCAACCATCTGTATGTGCACGACGAGAGCAAGCACATCTGCCCGTTCTGCAAGAAGGCCTTCAAGAGGAGAAAAGACATCAAGAGCCATCTTAAGTTGCACACGGGAGAGCAGCCGTATTCCTGTCCATGGTGTCAGAAGACATTCACCAGCGCCTCAAACTGTCGCATCCACAAACGGAGAATGCATCCCAACGAGTTCAAAGCTGCAGAGGAAACCAAGCCATTCGCTCCTGTCATAGGTGTAAAAAGTCACTCCCAGAGAAAGGTGATAAGGACCAAGTTCAAGGTGTTGCCACGTCCTAGCAAATGCAACACGTCAGACCTATTCTACGACCAGGCAGTGTCGCCAGATCATCCAAATGACCAGCtcctgATAAAATTGGAAAAGTGTCTTAAGCTATGTGGCCAGTGCAGTAACAAAATTATAGATTTTCACCAGTTTGCTCTGAAGTGTAAAGAAACACAGATATACTTGGAACAACTGTCGGATACTGCACTGCTCCCAGATGTCAAACAGGACGATGTGAAAACGATAACTGTGTTAAAAACGGTTCCTGTCACCATCAAAGAGGAAATAGACAACTCGAGTGATGATGACGCAAAGAATAGTGAAGACTTTATTCCGCTCAGTGACTTTAAGGAAAATCGGCAGAAAGTCAAAAGTAAAAGTGTGAACAGGAAAAGATTGAAGAGGAAATGCGCAGTAGTCAGCAAACAGATGTTGGAAGAAGAGATCAAGCAAGAATTGTCGGATAGCAGAGCGGAGAGTGACTTGGATGAAGTATATGATGAGTTTGATTCTAAAAGGCTGAAATACGTGAAACATGAAGAAACCTTTATGAACGAAGAAATGGTGTGTGGAAATCAGCAAGATGGGAGTGTTGCCACAAGAAAGGAATTAAGGAAACAAAACGACAACATATtcttATTCTCTTGTCACGTTTGCGACTCTGAATTCTCCAACTGGAACTCGTTAAAGTGGCATACAAAGCGGCAGCACAAATGCAAAGCCAAGGCCACCTGCATCTGCTCCAAGACCCTCATGACCAGCAAGTCGGTGCAGCGACACATGCTGAAGCACAACCCTGCCAGGGTGTCAAGCTGTGAAACCTGCGGCAAGATATTCTCCACGCCCTCTGAACTGTCGCGACATTCCATCTCGCACATACCAAAGGAGGAGCTGCCGTTTGTGTGCTGCAAGTGCGCTAAGAGATTTGCCACGGCCCGCATACTGAAGGTTCACGAGCGCATCCACACTCCCAAAGAACTCAGATACAAGTGGCCTTGTCCAAACTGTGAACTTAAattcaCATGTAAAAGTGGACTGGCCACACATGTACGTGTTGTGCATGACAAGGTGAAGCCGTTTGTATGTGACCTGTGCGGGCATCCGTGCAGCACCAAGGCTAATCTGGACGAGCACAGGATTAGGCATGGGACGATTAAGAACTTCATATGCGAGACCTGTGACAAAAGGTTTAAGACCAAGGGGTCCCTGAAGCGCCACATTGACATTCACAGCGATGCAGTCTACCAGTGCCCGCAGTGCCCGGTGCTGCTCAACTCCAAGCGGACGCTGCGCAACCATCTGTATGTGCATGATGACAAGAGTAAGCACATCTGCCCGTTCTGCAAGAAGGCCTTCAAGAGGAGAAAAGACATCAAGTGCCATCTTAAGTTGCACACGGGAGAGCGACCATATTCCTGTCCATGGTGTCAGAAGACTTTCACCAACGGCTCCAACTGCCGCATCCACAAGCGGAGAATGCATCCCAACGAGTTCAAAGCTGCAGAGGAAACCAATCCATTCGCTCCTGTCATTGGTGCAAAAAGTCACTCGCAGAGAAAGGTGATAAGGACCAAGTTCAAGGTGTTGCCGCGTCCTGGCAAATGTAACACGTCAGATTTATCCTACGACCAGGCAGTGTCGCCAGATCATCCAAATGACCAGCtcctggtcgatagctcagtctgTAGAGTGTCTACTTTCTGA
Protein Sequence: MLCGQCSNKIIDFHQFALKCKETQIYLEQLSDTALLPDVKQDDVKTITVLKTVPVTIKEEIDNSSDDDAKNSEDFIPLADFEENRQKVKSKSVNRKRLKRKCTAVSKQMLEEEIKQELSDRRAESVKSLINTTGVRVPDEFDSKTLKYVKHEETFKDEDMVCGNQQNGFYCNFCDSEFSNWNSLKLHSRRQHKCKAKATCICSKTLMTSKSVQQHMLKHNPASVSSCETCGKIFSTPSELSRHSISHIPKEELPFVCCTCAKGFATARILKVHERIHTPKELRYKWPCPNCELKFTYKSGLATHVRAVHDKMKPFVCDLCGHPCSTKGNLEVHRIRHGTVKNFICEICDKGFKTKGSLQRHMDIHSDAVYQCPQCPVLLNSKMTLRNHLYVHDESKHICPFCKKAFKRRKDIKSHLKLHTGEQPYSCPWCQKTFTSASNCRIHKRRMHPNEFKAAEETKPFAPVIGVKSHSQRKVIRTKFKVLPRPSKCNTSDLFYDQAVSPDHPNDQLLIKLEKCLKLCGQCSNKIIDFHQFALKCKETQIYLEQLSDTALLPDVKQDDVKTITVLKTVPVTIKEEIDNSSDDDAKNSEDFIPLSDFKENRQKVKSKSVNRKRLKRKCAVVSKQMLEEEIKQELSDSRAESDLDEVYDEFDSKRLKYVKHEETFMNEEMVCGNQQDGSVATRKELRKQNDNIFLFSCHVCDSEFSNWNSLKWHTKRQHKCKAKATCICSKTLMTSKSVQRHMLKHNPARVSSCETCGKIFSTPSELSRHSISHIPKEELPFVCCKCAKRFATARILKVHERIHTPKELRYKWPCPNCELKFTCKSGLATHVRVVHDKVKPFVCDLCGHPCSTKANLDEHRIRHGTIKNFICETCDKRFKTKGSLKRHIDIHSDAVYQCPQCPVLLNSKRTLRNHLYVHDDKSKHICPFCKKAFKRRKDIKCHLKLHTGERPYSCPWCQKTFTNGSNCRIHKRRMHPNEFKAAEETNPFAPVIGAKSHSQRKVIRTKFKVLPRPGKCNTSDLSYDQAVSPDHPNDQLLVDSSVCRVSTF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -